Dear HCP team members,
Sorry for bothering you all again. But this time the analysis got stuck in
its initial FreeSurfer processing with the following error:
/xxx/xxx/xxx/xxx/HCP_data/scripts/Pipelines-3.4.0/FreeSurfer/FreeSurferPipeline.sh:
line 78: recon-all: command not found.
Ful details of
What are your environment variables immediately before calling the main
FreeSurfer.sh pipeline script?
Peace,
Matt.
On 2/17/15, 11:47 AM, Donna Dierker do...@brainvis.wustl.edu wrote:
Sounds like it can't find the freesurfer executables. This page might
help:
