Re: [HCP-Users] TOPUP options with HCP scripts - Phase Encoding and Voxel Size incompatibilty with EPI

2015-09-01 Thread Harms, Michael
ens, Michael Cc: hcp-users@humanconnectome.org Subject: Re: [HCP-Users] TOPUP options with HCP scripts - Phase Encoding and Voxel Size incompatibilty with EPI     Hi Michael, I know of at least one adaptation that you'll need, but your particular situation may unfortunately need more.   T

Re: [HCP-Users] TOPUP options with HCP scripts - Phase Encoding and Voxel Size incompatibilty with EPI

2015-08-31 Thread Stevens, Michael
know if I have any problems. Thanks again! Best, Mike From: Harms, Michael [mailto:mha...@wustl.edu] Sent: Monday, August 31, 2015 3:40 PM To: Stephen Smith; Stevens, Michael Cc: hcp-users@humanconnectome.org Subject: Re: [HCP-Users] TOPUP options with HCP scripts - Phase Encoding and Voxel Size

[HCP-Users] TOPUP options with HCP scripts - Phase Encoding and Voxel Size incompatibilty with EPI

2015-08-30 Thread Stevens, Michael
Hi folks, I have a technical question about processing data using the HCP 3.5 pipeline scripts. We recently set up an HCP MRI data collection protocol for one of my new R01s. I just learned over the weekend that - although we did a very careful job ensuring that all the sequences being used