Re: [HCP-Users] tfMRI masking, lateralization

2014-12-11 Thread Timothy Coalson
You can do this on the surface for the cortex, you will probably want to use -cifti-separate to get the left/right pieces as separate files, then you can use -metric-math for difference/thresholding/masking/etc, and then -metric-vertex-sum with an -integrate option to get an answer in terms of surf

Re: [HCP-Users] tfMRI masking, lateralization

2014-12-11 Thread Glasser, Matthew
Why wouldn’t you do this in CIFTI space? Peace, Matt. From: Aaron R <aaro...@gmail.com> Date: Thursday, December 11, 2014 at 3:12 PM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] tfMRI masking, lateralization Dear HC

[HCP-Users] tfMRI masking, lateralization

2014-12-11 Thread Aaron R
Dear HCP users, I'd like to investigate lateralization of activation in task data in some subcortical and surface Brodmann areas. Generally, as far as I know, this is usually done by comparing % of voxels activated at some threshold in a region. Is there any straightforward way to do this in workb