Re: [HCP-Users] Custom visualisation help

2017-06-21 Thread Timothy Coalson
As a sanity check, try adding "-drop-unused-labels". If loading that result still has the labels in the features box, then it means your input file does have the values that your text files specifies. To expend on my previous reply (we are a little busy with the HCP course), the last element in

Re: [HCP-Users] Custom visualisation help

2017-06-21 Thread Seán Froudist Walsh
Thanks a lot for the suggestion Timothy. Unfortunately I'm still getting a colourless map. I did get the result I wanted using the matlab gifti toolbox ( http://www.artefact.tk/software/matlab/gifti/ ), so no rush. Perhaps I'm saving under the wrong name, or doing something wrong when trying to

Re: [HCP-Users] Custom visualisation help

2017-06-21 Thread Timothy Coalson
The fourth "color" specifier in your text file should be 255, not 1. Tim On Wed, Jun 21, 2017 at 8:34 AM, Seán Froudist Walsh wrote: > Sorry, made a mistake in my e-mail. I tried wb_command > -volume-label-import and got the results explained previously. Any ideas? > >

Re: [HCP-Users] Custom visualisation help

2017-06-21 Thread Seán Froudist Walsh
Sorry, made a mistake in my e-mail. I tried wb_command -volume-label-import and got the results explained previously. Any ideas? Thanks, Sean On 20 June 2017 at 20:08, Glasser, Matthew wrote: > I think you want wb_command -volume-label-import. > > Peace, > > Matt. > >

Re: [HCP-Users] Structural Protocol

2017-06-21 Thread Harms, Michael
Hi, You can find an importable protocol here: http://protocols.humanconnectome.org/CCF/ The protocols that we are using for the HCP-Aging/Development projects are highly similar, but include a few additions (e.g., switch to navigator-corrected anatomicals; addition of PCASL scan). Those will

[HCP-Users] Structural Protocol

2017-06-21 Thread Rachel Woodall
Hello, Is the Pheonix ZIP file available for the structural protocol on a 3T Siemens Prisma? Many thanks, Rachel -- Rachel Woodall PhD Student University of York Department of Psychology YO10 5DD Email: rachel.wood...@york.ac.uk Phone: 01904 567613