Re: [HCP-Users] Restricting workbench thread usage

2017-09-08 Thread Timothy Coalson
Workbench uses OpenMP for parallelization, and is therefore controlled via its environment variables. OMP_NUM_THREADS is probably the one you are looking for. We will add this information to the help info of wb_command in a future release. Tim On Fri, Sep 8, 2017 at 2:47 PM, Reinder Vos de

[HCP-Users] Restricting workbench thread usage

2017-09-08 Thread Reinder Vos de Wael
Hi, As part of a larger pipeline that I would like to run in parallel I use wb_command -volume-warpfield-resample. This command seems to use all threads available on the workstation. Is there any way to limit its thread usage to a single thread or to any specified number of threads? Thanks,

Re: [HCP-Users] rfMRI processing

2017-09-08 Thread Glasser, Matthew
That is correct. Peace, Matt. From: hercp > Date: Friday, September 8, 2017 at 11:51 AM To: Matt Glasser > Subject: Re: [HCP-Users] rfMRI processing Okay. I will just use them as they are then, since the linear

Re: [HCP-Users] rfMRI processing

2017-09-08 Thread Glasser, Matthew
We just use a linear detrend. Matt. From: hercp > Date: Friday, September 8, 2017 at 11:46 AM To: Matt Glasser > Subject: Re: [HCP-Users] rfMRI processing Thank you, Matt. Your responses are always very helpful.