Re: [HCP-Users] DWI in CCF Prisma protocol

2017-09-29 Thread Harms, Michael
And it is all handled automatically for the dMRI data in the HCP Pipeline. Cheers, -MH -- Michael Harms, Ph.D. --- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry, Box

Re: [HCP-Users] DWI in CCF Prisma protocol

2017-09-29 Thread Keith Jamison
That's right. -Keith On Fri, Sep 29, 2017 at 4:33 PM, Jeffrey Spielberg < jspielb...@psych.udel.edu> wrote: > One further question: it looks like there no separate AP/PA fieldmaps for > dMRI in the CCF protocol, whereas there are SE fieldmaps for resting - is > that correct? If so, is this

Re: [HCP-Users] DWI in CCF Prisma protocol

2017-09-29 Thread Jeffrey Spielberg
One further question: it looks like there no separate AP/PA fieldmaps for dMRI in the CCF protocol, whereas there are SE fieldmaps for resting - is that correct? If so, is this because the b0 images from the dMRI can be used for this purpose (e.g., in topup)? Best, Jeff -- Jeffrey M.

[HCP-Users] parcellation papaya viewer

2017-09-29 Thread Jenny Gilbert
Quick question about the papaya viewer interface associated with the Group-ICA parcellation used in megatrawl: is the activation threshold (default is set to 10 to 40) used t-value or z-value? Thanks, Jenny Gilbert ___ HCP-Users mailing list