Re: [HCP-Users] how to map DTI data to CIFTI space and do network analysis by MMP parcellation ?

2018-06-28 Thread Glasser, Matthew
Do you want to do tractography? Peace, Matt. From: mailto:hcp-users-boun...@humanconnectome.org>> on behalf of "baixi...@gmail.com" mailto:baixi...@gmail.com>> Date: Thursday, June 28, 2018 at 8:53 AM To: hcp-users mailto:hcp-users@humanconnectome.org>> Subject:

[HCP-Users] how to map DTI data to CIFTI space and do network analysis by MMP parcellation ?

2018-06-28 Thread baixi...@gmail.com
Dear expert : I have successfully processed my T1w and fMRI data into CIFTI space. Now I get some DTI data which include something like .bval / .bvec files. I donot know how to process them into CIFTI and do network analysis by MMP parcellation? Thank you! BestRegards! Bocheng Wang

Re: [HCP-Users] Gambling task phase encoding

2018-06-28 Thread Glasser, Matthew
The Gambling contrast itself (reward-punish) didnĀ¹t work very well. Matt. On 6/28/18, 3:48 AM, "hcp-users-boun...@humanconnectome.org on behalf of Filip Grill" wrote: >Dear HCP users, > >I am interested in using the fMRI data from the gambling task for my >project. Ultimately I will use the

[HCP-Users] Gambling task phase encoding

2018-06-28 Thread Filip Grill
Dear HCP users, I am interested in using the fMRI data from the gambling task for my project. Ultimately I will use the CIFTI files but right now I am trying to understand the data inside and out so I have started looking at the minimally processed NIFTI files. I have noticed that when using

Re: [HCP-Users] list of significant parcels

2018-06-28 Thread Timothy Coalson
You can export the data from the parcellated cifti file with wb_command -cifti-convert -to-text, but that doesn't contain the parcel names. The -file-information command will tell you the parcel names, in the order they are in the file, giving you the missing piece. Tim On Thu, Jun 28, 2018,

Re: [HCP-Users] list of significant parcels

2018-06-28 Thread Aaron R
Hi Matt, Thanks for the reply, but unfortunately wb_command -file-information doesn't help. It shows all of the parcels of the original parcellation. Presumably they're all still there, but some now have a zero value after thresholding. Thanks, Aaron On Wed, Jun 27, 2018 at 11:56 PM, Glasser,