[HCP-Users] Exporting the dense connectome matrix

Hi all, I was wondering if there is an easy way to export the dense functional connectome matrix into a txt file? I am specifically interested in the voxel by voxel matrix, rather than the grayordinate matrix. Tried to download the relevant cifti file from DB and open it in MATLAB (using a dedi

[HCP-Users] Postdoctoral Research Associate Position at UNC Chapel Hill

A Postdoctoral Scholar position is immediately open to work with the Network Neuroscience lab (dayanlab.web.unc.edu) at the Biomedical Research Imaging Center, University of North Carolina School of Medicine. The position is open to accomplished and highly motivate

Re: [HCP-Users] Freesurfer parcellation - list of coordinates

ng me much as I can't register the actual parcels onto this imported image and therefore can't compute what I need. Are you aware, by any chance, of any other way this can be done? Many thanks E. -Original Message----- From: Dayan, Eran (NIH/NINDS) [F] Sent: Wednesday, July 01, 2

[HCP-Users] Freesurfer parcellation - list of coordinates

Was wondering if at some point along the Freesurfer pipeline, the (MNI/Talairach) coordinates of the parcellated cortical and subcortical structures were saved? If so, how can these be accessed? Many thanks! Eran ___ HCP-Users mailing list HCP-U

Re: [HCP-Users] Accessing Freesurfer measurements via ConnectomeDB

Yes, Dan, that's indeed what I was after- just the stats. Getting them in one spreadsheet would be awesome Thanks ! Eran From: Marcus, Dan [mailto:dmar...@wustl.edu] Sent: Friday, December 19, 2014 4:42 PM To: Jennifer Elam; Dayan, Eran (NIH/NINDS) [F]; HCP-Users@humanconnectome.org Su

[HCP-Users] Accessing Freesurfer measurements via ConnectomeDB

I am trying to access volumetric data generated by the Freesurfer pipeline for the entire s500 release. In ConnectomeDB it's very easy to access subcortical volumes and cortical (surface) area and thickness measurements, as these are included in the CSV file provided for the entire dataset (an

[HCP-Users] subjects with data in Q1 and Q2 ?

Dear HCP users, I am analyzing RS datasets from Q1 and Q2 (the data was obtained through 'Connectome In A Box'), looking among other things for test-retest reliability within subjects. I only now noticed that 3 subject codes (199251, 585862, 896778) appear both in Q1 and Q2. Are these the same