gt; packages, and we work with them on improvements), but I can't recommend FSL
> resampling tools to the unwary as the first choice for a new task in an
> unknown volume space.
>
> Tim
>
>
> On Wed, May 29, 2019 at 1:16 PM Jaime Caballero
> wrote:
>
>> Thank you, Timothy
ANALYZE format images). Instead, wb_command
> -volume-affine-resample, given an identity matrix (and NOT specifying
> -flirt) will do the resampling via nifti mm coordinates, with no guesswork.
>
> Tim
>
>
> On Tue, May 28, 2019 at 8:08 AM Jaime Caballero
> wrote:
>
Thank you so much!
It worked fine, and the resulting ROIs are were they are suposed to be.
Regards,
Jaime
El lun., 27 may. 2019 22:20, Glasser, Matthew escribió:
> That file does exist in the structural package then.
>
>
>
> Matt.
>
>
>
> *From: *Jaime Caballer
to HCP files.
Jaime
El lun., 27 may. 2019 22:12, Glasser, Matthew escribió:
> I thought you said you were using a locally collected sample you ran the
> HCP Pipelines on?
>
> Matt.
>
>
>
> *From: *Jaime Caballero
> *Date: *Monday, May 27, 2019 at 3:10 PM
> *To: *"
>
> Matt.
>
>
>
> *From: *Jaime Caballero
> *Date: *Monday, May 27, 2019 at 12:08 PM
> *To: *"Glasser, Matthew"
> *Cc: *"hcp-users@humanconnectome.org"
> *Subject: *Re: [HCP-Users] Convert nifti-ROIs to cifti format
> (subcortical)
>
>
ing a .dlabel.nii output or a .dscalar.nii output?
>
>
>
> Matt.
>
>
>
> *From: * on behalf of Jaime
> Caballero
> *Date: *Monday, May 27, 2019 at 10:37 AM
> *To: *"hcp-users@humanconnectome.org"
> *Subject: *[HCP-Users] Convert nifti-ROIs to cifti format
rTemplateFile"
"$CiftiOut" -volume-all "$NiftiFileResampled"
Which outputs the error: -volume-all specifies a volume file that doesn't
match the volume space of the template cifti file
Is there anything wrong with my way of doing this procedure?
Thanks in a
