Re: [HCP-Users] Subjects with less than 1200 time points

Hi, Is there any documentation of what the reason was for stopping the scan early in each case? If not, what were generally the reasons for stopping early? Reinder > On Oct 12, 2017, at 9:52 AM, Glasser, Matthew wrote: > > That just means that the scan did not complete

[HCP-Users] Restricting workbench thread usage

, Reinder Vos de Wael ___ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users

[HCP-Users] Subcortical surface sampling outside borders of CIFTI

Hi HCP, I am extracting resting state data from subcortical surfaces. Initially, I had planned to do this based on the subcortical voxels included in the CIFTI file (i.e. rfMRI_REST1_LR_Atlas_MSMAll_hp2000_clean.dtseries.nii), however, some parts of my surfaces fall slightly outside the

Re: [HCP-Users] cifti to 'real' nifti

of Medicine > Department of Psychiatry > Phone: 314-362-7864 > Email: gburg...@wustl.edu > > > On Mar 23, 2017, at 12:36 PM, Reinder Vos de Wael < > reinder.vosdew...@gmail.com> wrote: > > > > Hi, > > > > I would like to extract the rfMRI sign

[HCP-Users] cifti to 'real' nifti

Hi, I would like to extract the rfMRI signal from a subcortical brain volume and correlate this signal to cortical signals. Preferably I'd use the cifti voxels for this, but the software I'm using isn't compatible with cifti or the 'fake' nifti produced by wb_command -cifti-convert. So I was

[HCP-Users] T1 divided by T2 in MNI space

Hi HCP, I am looking to use T1w images divided by T2w images. In the HCP subject folders I can only find these in subject space (/T1w/T1wDividedByT2w.nii.gz), but not in MNI space. If I take the MNI space images and divide each T1w voxel with its corresponding T2w voxel, then would these results