Re: [HCP-Users] Strange output when running ./FreeSurferPipelineBatch.sh

2019-06-08 Thread Glasser, Matthew
That is a normal, if a somewhat ominous informational message. Matt. From: on behalf of Kavinash Loganathan Date: Saturday, June 8, 2019 at 2:39 AM To: "HCP-Users@humanconnectome.org" Subject: [HCP-Users] Strange output when running ./FreeSurferPipelineBatch.sh Hi guys,

[HCP-Users] Strange output when running ./FreeSurferPipelineBatch.sh

2019-06-08 Thread Kavinash Loganathan
Hi guys, I finished the PreFreesurfer run on the example file and just started Freesurfer pipeline when I got this output: This script must be SOURCED to correctly setup the environment prior to running any of the other HCP scripts contained here 100307 About to use fsl_sub to queue or run