Re: [HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii

If you want to run wb_command (the command line program) from the terminal, you should execute the file “wb_command” contained in the distribution’s “bin_macosx64” directory (/workbench/bin_macosx64/wb_command). wb_command.app is an OS X Bundle (a directory that contains the program and

Re: [HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii

Hi, I'm trying to run wb_command.app on OSX 10.11.1 but the app doesn't respond or the terminal. I'm running on root:xnu-3247.10.11~1/RELEASE_X86_64 x86_64 Do I miss a first step? Thanks for the help David On Wed, Nov 25, 2015 at 12:00 AM, Timothy Coalson wrote: > This part of

Re: [HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii

This part of your call: , 'readdata', false); is telling ft_read_cifti to not load the data matrix, that is why it isn't there. If you are just as comfortable in C++, then yes, CiftiLib is likely the best solution, it is directly based on the code we use in connectome workbench for cifti files.

Re: [HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii

Hello, With fieldTrip reading using this line mycifti = ft_read_cifti( '/Users/David/Desktop/HumanConnectomeProject/HCP_S500_R468_rfMRI_MIGP_d4500ROW_zcorr/HCP_S500_R468_MIGPd4500ROW.dconn.nii', 'readdata', false); I get: dimond (pos_pos), hdr (1x1 struct), unit ('mm'), brain structure,

Re: [HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii

o: hcp-users@humanconnectome.org Subject: [HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii Hello, I work in Specs Lab in Pompeu Fabra University as a Phd student. I'm building an app for connectome visualisation and brain activity simulation called BrainX3. The first version use Hagmann d

Re: [HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii

mber 23, 2015 11:18 AM > *To:* hcp-users@humanconnectome.org > *Subject:* [HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii > > Hello, > I work in Specs Lab in Pompeu Fabra University as a Phd student. > I'm building an app for connectome visualisation and brain act

Re: [HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii

To get a dconn loaded in matlab, you of course need to have a large amount of available memory. Freezing is what I would expect if you don't have enough memory, and start using a lot of swap space (some ways of loading might initially load it as double precision, and need twice the memory). As

[HCP-Users] Trying to read HCP_S500_R468_MIGPd4500ROW.dconn.nii

Hello, I work in Specs Lab in Pompeu Fabra University as a Phd student. I'm building an app for connectome visualisation and brain activity simulation called BrainX3. The first version use Hagmann dataset based on 998 nodes and ~14.000 bidirectional connections. For the new version I would like