Re: [HCP-Users] dMRI: Error while running "eddy_postproc.sh"

Oh, I see. Yes, the —combrain-data-flag in DiffPreprocPipeline.sh was 1 since I did not touch it. I will try to use "2". Thank you so much. Sang-Young > On Aug 25, 2017, at 12:30 PM, Harms, Michael wrote: > > > See the --combine-data-flag in DiffPreprocPipeline.sh >

Re: [HCP-Users] dMRI: Error while running "eddy_postproc.sh"

See the --combine-data-flag in DiffPreprocPipeline.sh The default value of 1 is intended for acquisitions in which you have acquired the full vector table with both polarities, which isn’t how you acquired your data. In your case, you’ll need to use a value of ‘2’ for that flag. Cheers, -MH

[HCP-Users] dMRI: Error while running "eddy_postproc.sh"

Dear HCP users: I have another problem for running Diffusion Preprocessing pipeline. After eddy current correction, the pipeline proceeded to run eddy_postproc.sh. But I got error message as follow: ** Traceback (most recent call last):