Sure the inflated surface of the midthickness surface average of the entire
sample would be fine.
Matt.
From: Darko Komnenić mailto:komnen...@gmail.com>>
Date: Thursday, August 9, 2018 at 6:12 AM
To: "Winkler, Anderson (NIH/NIMH) [E]"
mailto:anderson.wink...@nih.gov>>
Cc: Matt Glasser
Thank you all for the very useful feedback!
A quick question before I address the other points:
I used the average surface off all controls in one image, and average
surface of all patients in the other. If I understood Anderson's comment
correctly, it'd be better to use exactly the same inflated
Dear HCP experts,
I would like to download HCP1200 PTN data from ConnectomeDB
(https://db.humanconnectome.org/data/projects/HCP_1200). After configuring IBM
Aspera Connect, I couldn't establish HTTP connection. The error message
reported 'Error establishing HTTP conn... (check HTTP port and
Hi,
We are trying to set up the HCP imaging protocol (used for the lifespan study)
on our Prisma (+32ch coil).
Is it possible to get the gradient table please?
\\USER\HCP-Lifespan\Lifespan\Session
1\DWI_dir98_AP
TA:5:35 PAT:Off Voxel size:1.5x1.5x1.5 mm Rel. SNR:1.00 :epse
Hello HCP,
We are a team of researchers designing some deep learning tools we have created
for modality conversions, and wanting to test our library on the HCP dataset
(structural T1 and T2). We are having issues copying from the s3 bucket.
Currently after creating our credentials, running aws
Hi Taicheng,
The only way to download the PTN dataset is through ConnectomeDB using Aspera,
which was not affected by the AWS bucket migration. It sounds like the problem
is your firewall. Our Aspera server is configured to use TCP and UDP Port 33001
for file transfers instead of a common
Hi Harith,
You can download the CCF protocol template used for Lifespan which includes the
diffusion gradient vectors from the link in the sidebar on this page:
http://protocols.humanconnectome.org/CCF/
Download The CCF Protocol Template - Human Connectome
Hi Xavier,
That message indicates that the access key in your credentials isn't a
currently valid access key registered with AWS. I'm thinking that would most
likely either be a cut-paste issue or an issue or an issue where the access and
secret keys are switched or something similar. One
I would suggest caution as to syncing the data, mounting may suit your
purposes better (can look around and fetch file contents as-needed rather
than getting everything even if it isn't used). The different releases are
in different folders, and basically all of the earlier release subjects are
It looks like there is an alternate explanation: attempting to sync the
entire bucket fails, but syncing one folder in it works:
$ aws s3 --profile tempbucket sync --region us-east-1
's3://hcp-openaccess-temp' /mnt/myelin/tim/synctest
A client error (AccessDenied) occurred when calling the
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