Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-22 Thread Marta Moreno
ouis, MO 63110 Email: mha...@wustl.edu > > From: on behalf of Marta Moreno > > Date: Saturday, April 20, 2019 at 12:02 PM > To: "Glasser, Matthew" > Cc: HCP Users > Subject: Re: [HCP-Users] DeDriftAndResamplePipeline error > >

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-20 Thread Harms, Michael
gt;, "Harwell, John" mailto:jharw...@wustl.edu>>, HCP Users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] DeDriftAndResamplePipeline error I think it worked now. The script finished pretty fast without prompting an error on the screen except for the

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-20 Thread Marta Moreno
ot;Harwell, > John" mailto:jharw...@wustl.edu>>, HCP Users > mailto:hcp-users@humanconnectome.org>> > Subject: Re: [HCP-Users] DeDriftAndResamplePipeline error > > I think it worked now. The script finished pretty fast without prompting an > error on the screen

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-19 Thread Glasser, Matthew
>>, "Harwell, John" mailto:jharw...@wustl.edu>>, HCP Users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] DeDriftAndResamplePipeline error I think it worked now. The script finished pretty fast without prompting an error on t

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-18 Thread Marta Moreno
;mmorenoort...@icloud.com> Date: Monday, April 15, 2019 at 8:53 AM To: Matt Glasser <glass...@wustl.edu> Cc: HCP Users <hcp-users@humanconnectome.org>, Timothy Coalson <tsc...@mst.edu>, "Brown, Tim" <tbbr...@wustl.edu> Subject: Re: [HCP-Users] DeDriftAndResample

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-18 Thread Timothy Coalson
I believe Tim already gave you instructions for this. >>>> >>>> Also, the log_Warn line is again concerning as to whether you followed >>>> the installation instructions and all version 4.0.0 files here. >>>> >>>> Matt. >>>

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-18 Thread Marta Moreno
; Date: Monday, April 15, 2019 at 8:53 AM To: Matt Glasser <glass...@wustl.edu> Cc: HCP Users <hcp-users@humanconnectome.org>, Timothy Coalson <tsc...@mst.edu>, "Brown, Tim" <tbbr...@wustl.edu> Subject: Re: [HCP-Users] DeDriftAndResamplePipeline error I had to

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-15 Thread Timothy Coalson
ther you followed >> the installation instructions and all version 4.0.0 files here. >> >> Matt. >> >> From: Marta Moreno >> Date: Monday, April 15, 2019 at 8:53 AM >> To: Matt Glasser >> Cc: HCP Users , Timothy Coalson < >> tsc...@mst.edu>,

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-15 Thread Timothy Coalson
, Timothy Coalson < > tsc...@mst.edu>, "Brown, Tim" > Subject: Re: [HCP-Users] DeDriftAndResamplePipeline error > > I had to re-run DeDriftAndResamplePipeline twice because it was searching > for settings.sh in the wrong place, and now I am getting the following >

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-15 Thread Glasser, Matthew
at 10:56 PM To: Matt Glasser mailto:glass...@wustl.edu>> Cc: HCP Users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] DeDriftAndResamplePipeline error Thanks a lot for your response. I am running v.4.0.0 now. And I have set up the script as follow: HighResMesh="164&quo

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-15 Thread Marta Moreno
ne 124 needs an “s” on the end of the flag name to read --multirun-fix-concat-names=${MRFixConcatName}  Matt. From: Marta Moreno <mmorenoort...@icloud.com> Date: Sunday, April 14, 2019 at 10:56 PM To: Matt Glasser <glass...@wustl.edu> Cc: HCP Users <hcp-users@humanconnectome

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-14 Thread Marta Moreno
10:56 PM > To: Matt Glasser mailto:glass...@wustl.edu>> > Cc: HCP Users <mailto:hcp-users@humanconnectome.org>> > Subject: Re: [HCP-Users] DeDriftAndResamplePipeline error > > Thanks a lot for your response. > > I am running v.4.0.0 now. And I have set up the

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-14 Thread Glasser, Matthew
du>> Cc: HCP Users mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] DeDriftAndResamplePipeline error Thanks a lot for your response. I am running v.4.0.0 now. And I have set up the script as follow: HighResMesh="164" LowResMesh="32" RegName="MS

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-14 Thread Marta Moreno
Thanks a lot for your response.I am running v.4.0.0 now. And I have set up the script as

Re: [HCP-Users] DeDriftAndResamplePipeline error

2019-04-14 Thread Glasser, Matthew
In this case you do run it with the individual fMRI names and that doesn’t look like the version 4.0.0 example script... Matt. From: mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Marta Moreno mailto:mmorenoort...@icloud.com>> Date: Sunday, April 14, 2019 at 10:06 PM To: HCP