Re: [hwloc-devel] multiple simultaneous topology inits?

2011-03-01 Thread Bernd Kallies
On Tue, 2011-03-01 at 11:00 +0100, Brice Goglin wrote: > Le 01/03/2011 10:46, Bernd Kallies a écrit : > > To calculate topology-based pinning schemes and do process pinning (like > > done e.g. by OpenMPI or MVAPICH2) this is too long, when every process > > (MPI task) or thre

Re: [hwloc-devel] multiple simultaneous topology inits?

2011-03-01 Thread Bernd Kallies
pinning to the remaining processes. BK > Brice > > > > ___ > hwloc-devel mailing list > hwloc-de...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/hwloc-devel -- Dr. Bernd Kallies Konrad-Zuse-Zentrum für Informationstechnik Berlin Ta

Re: [hwloc-devel] Memory affinity

2011-02-28 Thread Bernd Kallies
on other OSs? Or do other OSs > track memory binding information when pages are swapped out? > -- Dr. Bernd Kallies Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustr. 7 14195 Berlin Tel: +49-30-84185-270 Fax: +49-30-84185-311 e-mail: kall...@zib.de

Re: [hwloc-devel] hwloc-1.1 crash when missing a NUMAnode

2011-02-07 Thread Bernd Kallies
On Mon, 2011-02-07 at 14:57 +0100, Brice Goglin wrote: > Le 07/02/2011 14:34, Bernd Kallies a écrit : > > Hallo, > > > > we currently have some large SMP systems (SGI Ultraviolet, 64 NUMA nodes > > and 1024 logical procs per OS instance). > > After reboot o

[hwloc-devel] hwloc-1.1 crash when missing a NUMAnode

2011-02-07 Thread Bernd Kallies
ine, which is OK I may upload hwloc-gather-topology information to somewhere (about 600 kByte, which is too big to attach it to emails to your mail server) Regards BK -- Dr. Bernd Kallies Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustr. 7 14195 Berlin Tel: +49-30-84185-270 Fax: +49-30-8

Re: [hwloc-devel] perl bindings

2011-01-21 Thread Bernd Kallies
On Fri, 2011-01-21 at 17:09 +0100, Samuel Thibault wrote: > Bernd Kallies, le Thu 20 Jan 2011 20:35:04 +0100, a écrit : > > On Thu, 2011-01-20 at 20:22 +0100, Samuel Thibault wrote: > > > Bernd Kallies, le Thu 20 Jan 2011 20:13:03 +0100, a écrit : > > > > The on

Re: [hwloc-devel] python bindings

2011-01-20 Thread Bernd Kallies
about are these OO method names, which I had to invent them myself. If there is some need to synchronize these with the python binding, we may agree about them. Backwards compatibility of the Perl binding is not a real problem, since there may be many aliases for a function in the base XS code.

Re: [hwloc-devel] Perl bindings question

2011-01-20 Thread Bernd Kallies
ot in typemap in Hwloc.xs, line 620 > Error: 'hwloc_topology_t' not in typemap in Hwloc.xs, line 635 > Error: 'hwloc_topology_t' not in typemap in Hwloc.xs, line 662 > Error: 'hwloc_topology_t' not in typemap in Hwloc.xs, line 680 > ...lots more like this (and others) > -- Dr. Bernd Kallies Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustr. 7 14195 Berlin Tel: +49-30-84185-270 Fax: +49-30-84185-311 e-mail: kall...@zib.de

Re: [hwloc-devel] bug in hwloc 1.1 hwloc_get_membind_nodeset on Linux

2011-01-18 Thread Bernd Kallies
On Tue, 2011-01-18 at 19:11 +0100, Brice Goglin wrote: > Le 18/01/2011 17:40, Bernd Kallies a écrit : > > Hallo, > > > > I'm using hwloc-1.1 on Linux 2.6.32.19 (x86_64) on a machine that has > > several NUMA nodes. It seems to me that there are unwanted bits left in

[hwloc-devel] bug in hwloc 1.1 hwloc_get_membind_nodeset on Linux

2011-01-18 Thread Bernd Kallies
Hallo, I'm using hwloc-1.1 on Linux 2.6.32.19 (x86_64) on a machine that has several NUMA nodes. It seems to me that there are unwanted bits left in the nodeset "set", when calling hwloc_get_membind_nodeset(topo, set, ...) after a successful hwloc_set_membind() or hwloc_set_membind_nodeset().

Re: [hwloc-devel] [hwloc-svn] svn:hwloc r2975

2010-12-22 Thread Bernd Kallies
time. The problem is nearly the same like having no HWLOC_API_VERSION in hwloc-0.9. BK > Brice > > ___ > hwloc-devel mailing list > hwloc-de...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/hwloc-devel -- Dr. Bernd Kallies Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustr. 7 14195 Berlin Tel: +49-30-84185-270 Fax: +49-30-84185-311 e-mail: kall...@zib.de

Re: [hwloc-devel] Hwloc perl binding

2010-12-15 Thread Bernd Kallies
On Wed, 2010-12-15 at 14:56 +0100, Brice Goglin wrote: > Le 15/12/2010 14:45, Bernd Kallies a écrit : > > The CPAN thing is the third implementation, which works with objects and > > accessor methods. It is as fast as the first implementation, and perl > > code looks almos

Re: [hwloc-devel] Hwloc perl binding

2010-12-15 Thread Bernd Kallies
On Wed, 2010-12-15 at 13:32 +0100, Brice Goglin wrote: > Le 15/12/2010 11:14, Bernd Kallies a écrit : > > Dear all, > > > > the Perl module Sys::Hwloc is available via CPAN, see > > > > http://search.cpan.org/~bka/Sys-Hwloc-0.04/ > > > > Comments are

Re: [hwloc-devel] Hwloc perl binding

2010-12-15 Thread Bernd Kallies
On Wed, 2010-12-15 at 11:20 +0100, Samuel Thibault wrote: > Hello, > > Bernd Kallies, le Wed 15 Dec 2010 11:15:21 +0100, a écrit : > > the Perl module Sys::Hwloc is available via CPAN, see > > > > http://search.cpan.org/~bka/Sys-Hwloc-0.04/ > > Do you have c

[hwloc-devel] Hwloc perl binding

2010-12-15 Thread Bernd Kallies
Dear all, the Perl module Sys::Hwloc is available via CPAN, see http://search.cpan.org/~bka/Sys-Hwloc-0.04/ Comments are welcome. Ciao BK -- Dr. Bernd Kallies Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustr. 7 14195 Berlin Tel: +49-30-84185-270 Fax: +49-30-84185-311 e-mail: kall

Re: [hwloc-devel] SWIG bindings

2010-12-06 Thread Bernd Kallies
On Thu, 2010-12-02 at 17:49 -0500, Jeff Squyres wrote: > On Dec 2, 2010, at 4:38 PM, Bernd Kallies wrote: > > >> 1.1 is pretty close to done. If you wanted to shift your work to be based > >> on 1.1, I think you'd be pretty safe. > > > > I'll try. Curren

Re: [hwloc-devel] SWIG bindings

2010-12-03 Thread Bernd Kallies
On Fri, 2010-12-03 at 09:54 +0100, Brice Goglin wrote: > Le 02/12/2010 22:25, Bernd Kallies a écrit : > > > >> Do you have any feel for if there are particular bottlenecks in hwloc / > >> lstopo that make it take so long? I wonder if we should just attack those >

Re: [hwloc-devel] SWIG bindings

2010-12-02 Thread Bernd Kallies
On Thu, 2010-12-02 at 14:45 -0500, Jeff Squyres wrote: > On Dec 2, 2010, at 4:25 AM, Bernd Kallies wrote: > > > I'm thinking about either submitting this to CPAN or to the hwloc dev > > team. However, I first wanted to wait how things with hwloc 1.1 will > > look, w

Re: [hwloc-devel] SWIG bindings

2010-12-02 Thread Bernd Kallies
On Thu, 2010-12-02 at 14:42 -0500, Jeff Squyres wrote: > On Dec 2, 2010, at 11:07 AM, Bernd Kallies wrote: > > > To implement a hash there > > exist two ways: > > > > a) the easy one: provide a new method like hwloc_get_obj_data(), that > > gets a "point

Re: [hwloc-devel] SWIG bindings

2010-12-02 Thread Bernd Kallies
ect methods that access object data. The hwloc API is not of this kind. These were my ideas. Comments are welcome. Note that we have very big machines with complicated topologies. Executing lstopo (pure C API) takes up to a second there. It made no sense to me to slow this down more. Cheers BK > > >

Re: [hwloc-devel] hwloc-1.0.2 on SLES11SP2 does not honor cpuset constraints

2010-08-13 Thread Bernd Kallies
On Fri, 2010-08-13 at 13:33 +0200, Samuel Thibault wrote: > Bernd Kallies, le Fri 06 Aug 2010 18:13:06 +0200, a écrit : > > > https://svn.open-mpi.org/trac/hwloc/changeset/2360 > > > > > > libibverbs is only used during make check when it's availabl

Re: [hwloc-devel] hwloc-1.0.2 on SLES11SP2 does not honor cpuset constraints

2010-08-09 Thread Bernd Kallies
On Mon, 2010-08-09 at 07:29 -0400, Jeff Squyres wrote: > On Aug 6, 2010, at 12:13 PM, Bernd Kallies wrote: > > > > libibverbs is only used during make check when it's available. > > > > There is a problem with this philosophy. We provide hwloc on our > >

Re: [hwloc-devel] hwloc-1.0.2 on SLES11SP2 does not honor cpuset constraints

2010-08-06 Thread Bernd Kallies
ogy-linux.c solved the problem. Thanks BK -- Dr. Bernd Kallies Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustr. 7 14195 Berlin Tel: +49-30-84185-270 Fax: +49-30-84185-311 e-mail: kall...@zib.de

Re: [hwloc-devel] hwloc-1.0.2 on SLES11SP2 does not honor cpuset constraints

2010-08-06 Thread Bernd Kallies
elease_agent=/sbin/cpuset_release_agent 0 0 -- Dr. Bernd Kallies Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustr. 7 14195 Berlin Tel: +49-30-84185-270 Fax: +49-30-84185-311 e-mail: kall...@zib.de

[hwloc-devel] hwloc-1.0.2 on SLES11SP2 does not honor cpuset constraints

2010-08-06 Thread Bernd Kallies
constraint. Other things like e.g. numatools report the expected constraint. Please let me know how I can assist you in alayzing the problem. Sincerely BK -- Dr. Bernd Kallies Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustr. 7 14195 Berlin Tel: +49-30-84185-270 Fax: +49-30-84185-311 e-mail

Re: [hwloc-devel] Bug report: topology strange on SGI UltraViolet

2010-07-28 Thread Bernd Kallies
of 1st Group3, 2nd task on 1st CPU of 3rd Group3 (which is the lonely one), 3rd task on 1st CPU of 2nd Group3. Having in mind that an MPI application that got all CPUs of this topology may start only 3 tasks and each task allocates a lot of memory far beyond than what a single NUMA node has directly at

Re: [hwloc-devel] Bug report: hwloc topology broken when restricted to cpusets

2010-07-13 Thread Bernd Kallies
the hwloc_topology_ignore_all_keep_structure approach. Sincerely BK On Tue, 2010-07-13 at 11:46 +0200, Brice Goglin wrote: > Le 13/07/2010 11:22, Bernd Kallies a écrit : > >> /bin/echo 0-4 > /dev/cpuset/mycpuset/cpus > >> /bin/echo 0-1 > /dev/cpuset/mycpuset/mems > >> /bin/echo $$ > /dev/cpuset