date:20180204

[Ifeffit] Demeter Mac install on High Sierra

2018-02-04 Thread Alexandre Simionovici

Hi guyz, 

Trying to install Demeter on a Mac thru the Macports command: 
sudo port install xorg-server demeter 
neither demeter nor xorg-server is known ! Macs nowadays have XQuartz 
as X11 window manager so xorg is not needed but what about Zeus' wife ? 

Has someone managed to install it on High Sierra or even Sierra ? 

TIA, 
Alex 
-- 
_ 
| Pr. Alexandre Simionovici | 
|Institut des Sciences de la Terre, UGA/CNRS tel. +33-(0)4.76.63.51.96 | 
|Observatoire des Sciences de l'Univers de Grenoble fax. +33-(0)4.76.51.40.58| 
|UMR 5275, Maison des Géosciences, 
alexandre.simionov...@univ-grenoble-alpes.fr| 
|CS 40700, 38058 Grenoble Cedex 9, FRANCE | 
|--|
 

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Re: [Ifeffit] Artemis having trouble

2018-02-04 Thread Sheraz Gul

Correct, changes I made to the ini file have been discussed in the thread
mentioned by Robert

On Sun, Feb 4, 2018 at 11:09 AM, Robert Gordon 
wrote:

> Changes to demeter.ini previously discussed in this thread...
>
> https://www.mail-archive.com/ifeffit@millenia.cars.aps.anl.
> gov/msg06035.html
>
>
> On 2/4/2018 11:03 AM, Matt Newville wrote:
>
>
>
> On Sun, Feb 4, 2018 at 11:50 AM, Sheraz Gul  wrote:
>
>> Hi Matt,
>> Thank you for the suggestions. I have other project files in
>> the same folder and they open fine. Anyways, I  upgraded to Demeter version
>> 0.9.26 pre 2 and somehow every project file opens fine now. Although, in
>> the ini file,  I had to correct the paths corresponding to exe files for
>> gunplot and feff; otherwise, Athena/Artemis will crash before opening.
>>
>
>
> OK, well that's good that it is now working!
> For a hint to other people who might have similar problems, you're saying
> that you had to change the location of Feff and Gnuplot in artemis.ini ?
> What were they, and what did you set them to be?
>
> --Matt
>
> Best regards,
>> Sheraz
>>
>> On Sun, Feb 4, 2018 at 9:28 AM, Matt Newville > > wrote:
>>
>>> Hi Sheraz,
>>>
>>> Robert suggested "the usual suspects", but your log file makes me
>>> suspicious that some of these suspects are still suspect ;).  A few things
>>> to try:
>>>
>>> a)  Try moving or deleting the "stash" at  
>>> C:\Users\sgshe\AppData\Roaming\demeter\stash,
>>> especially the ...\stash\_dem_dducbins folder.
>>>
>>>  b) Your project file looks like it is at C:\Sheraz\Berkeley\UC
>>> Berkeley\Paul Alivisatos\Myounghwan Oh CoMn Oct17 73\Fitting\Mn3O4.fpj
>>> Could that path have non-ASCII characters in it?  I don't know that this
>>> will cause a problem, but people have seen problems with such
>>> things in the past, and if you opened it once, it may be OK. Still, it
>>> would be easy to move that to a simpler path (say,
>>> C:\Users\sgshe\Mn3O4.fpj)
>>> and trying to load that.
>>>
>>>
>>> On Sat, Feb 3, 2018 at 6:26 PM, Sheraz Gul  wrote:
>>>
 Yes, I did clean everything before reinstalling. The log file says,
 "You must define a method name at C:\Users\sgshe\AppData\Roaming
 \DemeterPerl\perl\vendor\lib\Class\MOP\Mixin\HasMethods.pm line 96"
 Not sure what that mean.

 On Sat, Feb 3, 2018 at 4:14 PM, Robert Gordon 
 wrote:

> When you reinstalled, did you delete the Demeter-related directories
> before reinstalling?
>
> does the log file say anything?
>
>
> On 2/3/2018 4:10 PM, Sheraz Gul wrote:
>
> Thanks Robert, I have tried all the usual suspects, even reinstalled
> Demeter, but nothing works.
>
> On Sat, Feb 3, 2018 at 3:48 PM, Robert Gordon 
> wrote:
>
>> Opens fine for me...
>>
>>
>>
>> Have you tried the usual suspects? Accidentally minimised a
>> window...Restarting the computer (or log off/on)...
>> or sending the log file to see if there is an error message...
>>
>> not much to go on here...
>>
>>
>> On 2/3/2018 3:29 PM, Sheraz Gul wrote:
>>
>> Can anyone please explain why Artemis is failing to open the fpj file
>> I have attached? It doesn't respond anymore and screen look like the
>> screenshot attached. It has happened to me multiple times now; I'm using
>> Demeter version 0.9.25 on windows 10.
>> Best regards,
>>
>> --
>> Sheraz Gul
>>
>>
>> ___
>> Ifeffit mailing 
>> listifef...@millenia.cars.aps.anl.govhttp://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
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>>
>>
>> ___
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>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
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>>
>
>
> --
> Sheraz Gul
>
>
> ___
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>


 --
 Sheraz Gul

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Re: [Ifeffit] Artemis having trouble

2018-02-04 Thread Robert Gordon

Changes to demeter.ini previously discussed in this thread...

https://www.mail-archive.com/ifeffit@millenia.cars.aps.anl.gov/msg06035.html

On 2/4/2018 11:03 AM, Matt Newville wrote:

On Sun, Feb 4, 2018 at 11:50 AM, Sheraz Gul > wrote:

Hi Matt,
            Thank you for the suggestions. I have other project
files in the same folder and they open fine. Anyways, I  upgraded
to Demeter version 0.9.26 pre 2 and somehow every project file
opens fine now. Although, in the ini file,  I had to correct the
paths corresponding to exe files for gunplot and feff; otherwise,
Athena/Artemis will crash before opening.

OK, well that's good that it is now working!
For a hint to other people who might have similar problems, you're 
saying that you had to change the location of Feff and Gnuplot in 
artemis.ini ?   What were they, and what did you set them to be?

--Matt

Best regards,
Sheraz

On Sun, Feb 4, 2018 at 9:28 AM, Matt Newville
>
wrote:

Hi Sheraz,

Robert suggested "the usual suspects", but your log file makes
me suspicious that some of these suspects are still suspect
;).  A few things to try:

a)  Try moving or deleting the "stash" at 
C:\Users\sgshe\AppData\Roaming\demeter\stash, especially the
...\stash\_dem_dducbins folder.

 b) Your project file looks like it is at
C:\Sheraz\Berkeley\UC Berkeley\Paul Alivisatos\Myounghwan Oh
CoMn Oct17 73\Fitting\Mn3O4.fpj
Could that path have non-ASCII characters in it?  I don't know
that this will cause a problem, but people have seen problems
with such
things in the past, and if you opened it once, it may be OK.
Still, it would be easy to move that to a simpler path (say,
C:\Users\sgshe\Mn3O4.fpj)
and trying to load that.

On Sat, Feb 3, 2018 at 6:26 PM, Sheraz Gul > wrote:

Yes, I did clean everything before reinstalling. The log
file says, "You must define a method name at

C:\Users\sgshe\AppData\Roaming\DemeterPerl\perl\vendor\lib\Class\MOP\Mixin\HasMethods.pm
line 96"
Not sure what that mean.

On Sat, Feb 3, 2018 at 4:14 PM, Robert Gordon
>
wrote:

When you reinstalled, did you delete the
Demeter-related directories before reinstalling?

does the log file say anything?

On 2/3/2018 4:10 PM, Sheraz Gul wrote:

Thanks Robert, I have tried all the usual suspects,
even reinstalled Demeter, but nothing works.

On Sat, Feb 3, 2018 at 3:48 PM, Robert Gordon
> wrote:

Opens fine for me...

Have you tried the usual suspects? Accidentally
minimised a window...Restarting the computer (or
log off/on)...
or sending the log file to see if there is an
error message...

not much to go on here...

On 2/3/2018 3:29 PM, Sheraz Gul wrote:

Can anyone please explain why Artemis is failing
to open the fpj file I have attached? It doesn't
respond anymore and screen look like the
screenshot attached. It has happened to me
multiple times now; I'm using Demeter version
0.9.25 on windows 10.
Best regards,

-- 
Sheraz Gul

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Re: [Ifeffit] Artemis having trouble

2018-02-04 Thread Matt Newville

On Sun, Feb 4, 2018 at 11:50 AM, Sheraz Gul  wrote:

> Hi Matt,
> Thank you for the suggestions. I have other project files in
> the same folder and they open fine. Anyways, I  upgraded to Demeter version
> 0.9.26 pre 2 and somehow every project file opens fine now. Although, in
> the ini file,  I had to correct the paths corresponding to exe files for
> gunplot and feff; otherwise, Athena/Artemis will crash before opening.
>


OK, well that's good that it is now working!
For a hint to other people who might have similar problems, you're saying
that you had to change the location of Feff and Gnuplot in artemis.ini ?
What were they, and what did you set them to be?

--Matt

Best regards,
> Sheraz
>
> On Sun, Feb 4, 2018 at 9:28 AM, Matt Newville 
> wrote:
>
>> Hi Sheraz,
>>
>> Robert suggested "the usual suspects", but your log file makes me
>> suspicious that some of these suspects are still suspect ;).  A few things
>> to try:
>>
>> a)  Try moving or deleting the "stash" at  
>> C:\Users\sgshe\AppData\Roaming\demeter\stash,
>> especially the ...\stash\_dem_dducbins folder.
>>
>>  b) Your project file looks like it is at C:\Sheraz\Berkeley\UC
>> Berkeley\Paul Alivisatos\Myounghwan Oh CoMn Oct17 73\Fitting\Mn3O4.fpj
>> Could that path have non-ASCII characters in it?  I don't know that this
>> will cause a problem, but people have seen problems with such
>> things in the past, and if you opened it once, it may be OK. Still, it
>> would be easy to move that to a simpler path (say,
>> C:\Users\sgshe\Mn3O4.fpj)
>> and trying to load that.
>>
>>
>> On Sat, Feb 3, 2018 at 6:26 PM, Sheraz Gul  wrote:
>>
>>> Yes, I did clean everything before reinstalling. The log file says, "You
>>> must define a method name at C:\Users\sgshe\AppData\Roaming
>>> \DemeterPerl\perl\vendor\lib\Class\MOP\Mixin\HasMethods.pm line 96"
>>> Not sure what that mean.
>>>
>>> On Sat, Feb 3, 2018 at 4:14 PM, Robert Gordon 
>>> wrote:
>>>
 When you reinstalled, did you delete the Demeter-related directories
 before reinstalling?

 does the log file say anything?


 On 2/3/2018 4:10 PM, Sheraz Gul wrote:

 Thanks Robert, I have tried all the usual suspects, even reinstalled
 Demeter, but nothing works.

 On Sat, Feb 3, 2018 at 3:48 PM, Robert Gordon 
 wrote:

> Opens fine for me...
>
>
>
> Have you tried the usual suspects? Accidentally minimised a
> window...Restarting the computer (or log off/on)...
> or sending the log file to see if there is an error message...
>
> not much to go on here...
>
>
> On 2/3/2018 3:29 PM, Sheraz Gul wrote:
>
> Can anyone please explain why Artemis is failing to open the fpj file
> I have attached? It doesn't respond anymore and screen look like the
> screenshot attached. It has happened to me multiple times now; I'm using
> Demeter version 0.9.25 on windows 10.
> Best regards,
>
> --
> Sheraz Gul
>
>
> ___
> Ifeffit mailing 
> listifef...@millenia.cars.aps.anl.govhttp://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>
>
>
> ___
> Ifeffit mailing list
> Ifeffit@millenia.cars.aps.anl.gov
> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>
>


 --
 Sheraz Gul


 ___
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 Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit



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>>>
>>>
>>> --
>>> Sheraz Gul
>>>
>>> ___
>>> Ifeffit mailing list
>>> Ifeffit@millenia.cars.aps.anl.gov
>>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>>>
>>>
>>
>>
>>
>> ___
>> Ifeffit mailing list
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>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
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>>
>
>
> --
> Sheraz Gul
>
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> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
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Re: [Ifeffit] Artemis having trouble

2018-02-04 Thread Sheraz Gul

Hi Matt,
Thank you for the suggestions. I have other project files in
the same folder and they open fine. Anyways, I  upgraded to Demeter version
0.9.26 pre 2 and somehow every project file opens fine now. Although, in
the ini file,  I had to correct the paths corresponding to exe files for
gunplot and feff; otherwise, Athena/Artemis will crash before opening.
Best regards,
Sheraz

On Sun, Feb 4, 2018 at 9:28 AM, Matt Newville 
wrote:

> Hi Sheraz,
>
> Robert suggested "the usual suspects", but your log file makes me
> suspicious that some of these suspects are still suspect ;).  A few things
> to try:
>
> a)  Try moving or deleting the "stash" at  
> C:\Users\sgshe\AppData\Roaming\demeter\stash,
> especially the ...\stash\_dem_dducbins folder.
>
>  b) Your project file looks like it is at C:\Sheraz\Berkeley\UC
> Berkeley\Paul Alivisatos\Myounghwan Oh CoMn Oct17 73\Fitting\Mn3O4.fpj
> Could that path have non-ASCII characters in it?  I don't know that this
> will cause a problem, but people have seen problems with such
> things in the past, and if you opened it once, it may be OK. Still, it
> would be easy to move that to a simpler path (say,
> C:\Users\sgshe\Mn3O4.fpj)
> and trying to load that.
>
>
> On Sat, Feb 3, 2018 at 6:26 PM, Sheraz Gul  wrote:
>
>> Yes, I did clean everything before reinstalling. The log file says, "You
>> must define a method name at C:\Users\sgshe\AppData\Roaming
>> \DemeterPerl\perl\vendor\lib\Class\MOP\Mixin\HasMethods.pm line 96"
>> Not sure what that mean.
>>
>> On Sat, Feb 3, 2018 at 4:14 PM, Robert Gordon 
>> wrote:
>>
>>> When you reinstalled, did you delete the Demeter-related directories
>>> before reinstalling?
>>>
>>> does the log file say anything?
>>>
>>>
>>> On 2/3/2018 4:10 PM, Sheraz Gul wrote:
>>>
>>> Thanks Robert, I have tried all the usual suspects, even reinstalled
>>> Demeter, but nothing works.
>>>
>>> On Sat, Feb 3, 2018 at 3:48 PM, Robert Gordon 
>>> wrote:
>>>
 Opens fine for me...



 Have you tried the usual suspects? Accidentally minimised a
 window...Restarting the computer (or log off/on)...
 or sending the log file to see if there is an error message...

 not much to go on here...


 On 2/3/2018 3:29 PM, Sheraz Gul wrote:

 Can anyone please explain why Artemis is failing to open the fpj file I
 have attached? It doesn't respond anymore and screen look like the
 screenshot attached. It has happened to me multiple times now; I'm using
 Demeter version 0.9.25 on windows 10.
 Best regards,

 --
 Sheraz Gul


 ___
 Ifeffit mailing 
 listifef...@millenia.cars.aps.anl.govhttp://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
 Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit



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>>>
>>>
>>> --
>>> Sheraz Gul
>>>
>>>
>>> ___
>>> Ifeffit mailing 
>>> listifef...@millenia.cars.aps.anl.govhttp://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>>>
>>>
>>>
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>>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>>>
>>>
>>
>>
>> --
>> Sheraz Gul
>>
>> ___
>> Ifeffit mailing list
>> Ifeffit@millenia.cars.aps.anl.gov
>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
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>
>
>
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-- 
Sheraz Gul
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Re: [Ifeffit] Artemis having trouble

2018-02-04 Thread Matt Newville

Hi Sheraz,

Robert suggested "the usual suspects", but your log file makes me
suspicious that some of these suspects are still suspect ;).  A few things
to try:

a)  Try moving or deleting the "stash" at
C:\Users\sgshe\AppData\Roaming\demeter\stash,
especially the ...\stash\_dem_dducbins folder.

 b) Your project file looks like it is at C:\Sheraz\Berkeley\UC
Berkeley\Paul Alivisatos\Myounghwan Oh CoMn Oct17 73\Fitting\Mn3O4.fpj
Could that path have non-ASCII characters in it?  I don't know that this
will cause a problem, but people have seen problems with such
things in the past, and if you opened it once, it may be OK. Still, it
would be easy to move that to a simpler path (say,
C:\Users\sgshe\Mn3O4.fpj)
and trying to load that.


On Sat, Feb 3, 2018 at 6:26 PM, Sheraz Gul  wrote:

> Yes, I did clean everything before reinstalling. The log file says, "You
> must define a method name at C:\Users\sgshe\AppData\Roaming
> \DemeterPerl\perl\vendor\lib\Class\MOP\Mixin\HasMethods.pm line 96"
> Not sure what that mean.
>
> On Sat, Feb 3, 2018 at 4:14 PM, Robert Gordon 
> wrote:
>
>> When you reinstalled, did you delete the Demeter-related directories
>> before reinstalling?
>>
>> does the log file say anything?
>>
>>
>> On 2/3/2018 4:10 PM, Sheraz Gul wrote:
>>
>> Thanks Robert, I have tried all the usual suspects, even reinstalled
>> Demeter, but nothing works.
>>
>> On Sat, Feb 3, 2018 at 3:48 PM, Robert Gordon 
>> wrote:
>>
>>> Opens fine for me...
>>>
>>>
>>>
>>> Have you tried the usual suspects? Accidentally minimised a
>>> window...Restarting the computer (or log off/on)...
>>> or sending the log file to see if there is an error message...
>>>
>>> not much to go on here...
>>>
>>>
>>> On 2/3/2018 3:29 PM, Sheraz Gul wrote:
>>>
>>> Can anyone please explain why Artemis is failing to open the fpj file I
>>> have attached? It doesn't respond anymore and screen look like the
>>> screenshot attached. It has happened to me multiple times now; I'm using
>>> Demeter version 0.9.25 on windows 10.
>>> Best regards,
>>>
>>> --
>>> Sheraz Gul
>>>
>>>
>>> ___
>>> Ifeffit mailing 
>>> listifef...@millenia.cars.aps.anl.govhttp://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>>>
>>>
>>>
>>> ___
>>> Ifeffit mailing list
>>> Ifeffit@millenia.cars.aps.anl.gov
>>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>>>
>>>
>>
>>
>> --
>> Sheraz Gul
>>
>>
>> ___
>> Ifeffit mailing 
>> listifef...@millenia.cars.aps.anl.govhttp://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>>
>>
>>
>> ___
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>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>>
>>
>
>
> --
> Sheraz Gul
>
> ___
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> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
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[Ifeffit] Demeter Mac install on High Sierra

Re: [Ifeffit] Artemis having trouble

Re: [Ifeffit] Artemis having trouble

Re: [Ifeffit] Artemis having trouble

Re: [Ifeffit] Artemis having trouble

Re: [Ifeffit] Artemis having trouble

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