[jira] [Resolved] (AIRAVATA-1618) Proper Exception handling in new workflow module.
[ https://issues.apache.org/jira/browse/AIRAVATA-1618?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma resolved AIRAVATA-1618. - Resolution: Fixed Fix Version/s: 0.15 Proper Exception handling in new workflow module. - Key: AIRAVATA-1618 URL: https://issues.apache.org/jira/browse/AIRAVATA-1618 Project: Airavata Issue Type: Task Reporter: Shameera Rathnayaka Assignee: Shameera Rathnayaka Fix For: 0.15 In happy path everything goes well with the new workflow implementation. Now we need to handle exceptions throw in different level of execution, workflow parsing , DAG processing , initiating workflow interpreter, etc ... -- This message was sent by Atlassian JIRA (v6.3.4#6332)
[jira] [Resolved] (AIRAVATA-1547) Increase the length of the host name in Edit Compute Resource in the gateway
[ https://issues.apache.org/jira/browse/AIRAVATA-1547?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma resolved AIRAVATA-1547. - Resolution: Fixed Tested in Dev-Test PGA. In edit mode the Host name length is increased to 100 characters. http://dev.test-drive.airavata.org/portal/pga/public/ Increase the length of the host name in Edit Compute Resource in the gateway Key: AIRAVATA-1547 URL: https://issues.apache.org/jira/browse/AIRAVATA-1547 Project: Airavata Issue Type: Bug Components: Application Catalog Environment: http://dev.test-drive.airavata.org/pga/public/ Reporter: Eroma Assignee: Nipurn Doshi Priority: Minor When editing the compute resource host name in the gateway, cannot enter more than 30 characters. In edit mode the host name should have the same length as in create compute resource ( in create compute resource length is 100 characters) -- This message was sent by Atlassian JIRA (v6.3.4#6332)
[jira] [Updated] (AIRAVATA-1651) Zookeeper connection lost error; Experiment failed
[ https://issues.apache.org/jira/browse/AIRAVATA-1651?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma updated AIRAVATA-1651: Assignee: Lahiru Gunathilake Zookeeper connection lost error; Experiment failed -- Key: AIRAVATA-1651 URL: https://issues.apache.org/jira/browse/AIRAVATA-1651 Project: Airavata Issue Type: Bug Environment: http://test-drive.airavata.org/pga/public Reporter: Eroma Assignee: Lahiru Gunathilake Two experiment has the same error message in log One experiment got FAILED at experiment level and no job status recorded. Other Experiment failed but the job got COMPLETE. Randomely occurs. was unable to recreate error messages retrived from log; 2015-03-26 09:33:34,693 [main-SendThread(gw127.iu.xsede.org:9181)] INFO org.apache.zookeeper.ClientCnxn - Opening socket connection to server gw127.iu.xsede.org/149.165.228.125:9181 ...skipping... org.apache.zookeeper.KeeperException$ConnectionLossException: KeeperErrorCode = ConnectionLoss for /gfac-experiments/gfac-node0/SLM-WRF-Stampede_c0697813-a8f4-4d8a-b0f3-6808f8538b18+IDontNeedaNode_a3b6133f-f8af-435d-9b2a-76838db535f6/org.apache.airavata.gfac.gsissh.handler.GSISSHInputHandler/state at org.apache.zookeeper.KeeperException.create(KeeperException.java:99) at org.apache.zookeeper.KeeperException.create(KeeperException.java:51) at org.apache.zookeeper.ZooKeeper.setData(ZooKeeper.java:1228) at org.apache.airavata.gfac.core.utils.GFacUtils.updatePluginState(GFacUtils.java:1013) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:902) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:690) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:481) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:210) at org.apache.airavata.gfac.core.utils.InputHandlerWorker.call(InputHandlerWorker.java:49) at java.util.concurrent.FutureTask.run(FutureTask.java:262) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:745) and aused by: org.apache.zookeeper.KeeperException$ConnectionLossException: KeeperErrorCode = ConnectionLoss for /gfac-experiments/gfac-node0/SLM-Trinity-Stampede_0bd73a38-6931-498f-af7b-d700dc177c43+IDontNeedaNode_db287294-796d-43c1-896d-e3b412b4c8a7/org.apache.airavata.gfac.ssh.handler.AdvancedSCPOutputHandler at org.apache.zookeeper.KeeperException.create(KeeperException.java:99) at org.apache.zookeeper.KeeperException.create(KeeperException.java:51) at org.apache.zookeeper.ZooKeeper.exists(ZooKeeper.java:1003) at org.apache.zookeeper.ZooKeeper.exists(ZooKeeper.java:1031) at org.apache.airavata.gfac.core.utils.GFacUtils.createPluginZnode(GFacUtils.java:935) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeOutFlowHandlers(BetterGfacImpl.java:939) -- This message was sent by Atlassian JIRA (v6.3.4#6332)
[jira] [Updated] (AIRAVATA-1656) Identify new issues in Airavata with the use of test framework and fix
[ https://issues.apache.org/jira/browse/AIRAVATA-1656?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma updated AIRAVATA-1656: Assignee: Chathuri Wimalasena Identify new issues in Airavata with the use of test framework and fix -- Key: AIRAVATA-1656 URL: https://issues.apache.org/jira/browse/AIRAVATA-1656 Project: Airavata Issue Type: Sub-task Reporter: Eroma Assignee: Chathuri Wimalasena Although this is given as a single tasks for every issue found newly a separate JIRA will require to be created as JIRAs -- This message was sent by Atlassian JIRA (v6.3.4#6332)
[jira] [Updated] (AIRAVATA-1655) Fix existing issues in Airavata using the test framework
[ https://issues.apache.org/jira/browse/AIRAVATA-1655?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma updated AIRAVATA-1655: Assignee: Chathuri Wimalasena Fix existing issues in Airavata using the test framework Key: AIRAVATA-1655 URL: https://issues.apache.org/jira/browse/AIRAVATA-1655 Project: Airavata Issue Type: Sub-task Reporter: Eroma Assignee: Chathuri Wimalasena -- This message was sent by Atlassian JIRA (v6.3.4#6332)
[jira] [Resolved] (AIRAVATA-1424) Failed experiments should not be modifiable.
[ https://issues.apache.org/jira/browse/AIRAVATA-1424?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma resolved AIRAVATA-1424. - Resolution: Fixed Tested in both http://test-drive.airavata.org/pga/public (PRODUCTION) and in http://dev.test-drive.airavata.org/portal/pga/public (DEV ENV). Failed experiments can only be Cloned. Cannot be modified. Failed experiments should not be modifiable. - Key: AIRAVATA-1424 URL: https://issues.apache.org/jira/browse/AIRAVATA-1424 Project: Airavata Issue Type: Improvement Reporter: Marlon Pierce See discussion at http://mail-archives.apache.org/mod_mbox/airavata-dev/201408.mbox/%3C517D926F-02AB-4BAB-A70E-4B76C0917E37%40gmail.com%3E. If an experiment fails, it should not be editable for resubmission. Instead, it should be cloned for resubmission if the user or gateway can fix the problem that caused the failure (user provided wrong input file, for example). -- This message was sent by Atlassian JIRA (v6.3.4#6332)
[jira] [Closed] (AIRAVATA-1411) Cannot Launch FAILED experiments in the PHP gateway. Gives an unhanded exception
[ https://issues.apache.org/jira/browse/AIRAVATA-1411?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma closed AIRAVATA-1411. --- Resolution: Not A Problem Reported issue is no longer valid as the implementation changed in Airavata. With current Airavata implementation FAILED experiments can only be cloned; no other action can be taken on FAILED experiments. Cannot Launch FAILED experiments in the PHP gateway. Gives an unhanded exception Key: AIRAVATA-1411 URL: https://issues.apache.org/jira/browse/AIRAVATA-1411 Project: Airavata Issue Type: Bug Affects Versions: 0.14 Reporter: Eroma Assignee: Marlon Pierce Cannot launch FAILED experiments in the PHP gateway. Gives an unhanded exception In PHP gateway for FAILED experiments Launch button is enabled. When clicked on Launch gives the unhanded exception in the Experiment Summary page. User is not given a reason as per why the experiment cannot be launched. -- This message was sent by Atlassian JIRA (v6.3.4#6332)
[jira] [Updated] (AIRAVATA-1645) AmberSander in Trestles failed at Exp level in Test PGA
[ https://issues.apache.org/jira/browse/AIRAVATA-1645?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma updated AIRAVATA-1645: Assignee: Lahiru Gunathilake AmberSander in Trestles failed at Exp level in Test PGA --- Key: AIRAVATA-1645 URL: https://issues.apache.org/jira/browse/AIRAVATA-1645 Project: Airavata Issue Type: Bug Affects Versions: 0.14 Environment: http://test-drive.airavata.org/pga/public/ Reporter: Eroma Assignee: Lahiru Gunathilake AmberSander (Trestles) failed at exp level and no log messages in airavata-server.out log. The error given in PGA Exp Summary; org.apache.zookeeper.KeeperException$ConnectionLossException: KeeperErrorCode = ConnectionLoss for /gfac-experiments/gfac-node0/SLM-AmberSander-Trestles_2a2c0191-123b-4309-ad2e-15e7f1ce8bbf+IDontNeedaNode_7a61-9df8-45b9-b8e0-9122e5b9af4d/org.apache.airavata.gfac.gsissh.handler.GSISSHInputHandler No job level status in PGA -- This message was sent by Atlassian JIRA (v6.3.4#6332)
[jira] [Updated] (AIRAVATA-1615) Please have clear notification on PGA when compute resources are under maintenance
[ https://issues.apache.org/jira/browse/AIRAVATA-1615?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Eroma updated AIRAVATA-1615: Assignee: Nipurn Doshi Please have clear notification on PGA when compute resources are under maintenance -- Key: AIRAVATA-1615 URL: https://issues.apache.org/jira/browse/AIRAVATA-1615 Project: Airavata Issue Type: Improvement Affects Versions: 0.14 Environment: http://test-drive.airavata.org/pga/public Reporter: Eroma Assignee: Nipurn Doshi Please have clear notification on PGA when compute resources are under maintenance. Ideally these types of notifications should be displayed in the PGA home page or can even be alerted users via email. Currently; In PGA experiment summary error is given as Error occurred when SSH BR2 gives the message BigRed2 is down for monthly scheduled system maintenance. In the Airavata log it is given as [ERROR] Error occurred... org.apache.airavata.gsi.ssh.api.SSHApiException: An exception occurred while connecting to server.Connecting server - bigred2.uits.iu.edu:22 connecting user name - cgateway at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.reconnect(GSISSHAbstractCluster.java:217) at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.init(GSISSHAbstractCluster.java:82) at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.init(GSISSHAbstractCluster.java:76) at org.apache.airavata.gsi.ssh.impl.PBSCluster.init(PBSCluster.java:40) at org.apache.airavata.gfac.ssh.util.GFACSSHUtils.addSecurityContext(GFACSSHUtils.java:132) at org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler.invoke(SSHDirectorySetupHandler.java:45) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:901) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:690) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:481) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:210) at org.apache.airavata.gfac.core.utils.InputHandlerWorker.call(InputHandlerWorker.java:49) at java.util.concurrent.FutureTask.run(FutureTask.java:262) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:745) Caused by: com.jcraft.jsch.JSchException: Auth fail at com.jcraft.jsch.Session.connect(Session.java:512) at com.jcraft.jsch.Session.connect(Session.java:183) at org.apache.ai -- This message was sent by Atlassian JIRA (v6.3.4#6332)
[jira] [Commented] (AIRAVATA-1652) Implement initial framework
[ https://issues.apache.org/jira/browse/AIRAVATA-1652?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14482470#comment-14482470 ] ASF subversion and git services commented on AIRAVATA-1652: --- Commit 526aa7782eb78b6e88bfa84f0165689cf605ebde in airavata's branch refs/heads/master from [~chathuri] [ https://git-wip-us.apache.org/repos/asf?p=airavata.git;h=526aa77 ] more fixes to test framework - AIRAVATA-1652 Implement initial framework --- Key: AIRAVATA-1652 URL: https://issues.apache.org/jira/browse/AIRAVATA-1652 Project: Airavata Issue Type: Sub-task Reporter: Chathuri Wimalasena Assignee: Chathuri Wimalasena -- This message was sent by Atlassian JIRA (v6.3.4#6332)
