[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Yang He updated HBASE-4218: --- Summary: Data Block Encoding of KeyValues (aka delta encoding / prefix compression (was: Data Block Encoding of KeyValues (aka delta encoding / prefix compression)) Data Block Encoding of KeyValues (aka delta encoding / prefix compression -- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, ASF.LICENSE.NOT.GRANTED--D1659.1.patch, ASF.LICENSE.NOT.GRANTED--D1659.2.patch, ASF.LICENSE.NOT.GRANTED--D1659.3.patch, ASF.LICENSE.NOT.GRANTED--D447.1.patch, ASF.LICENSE.NOT.GRANTED--D447.10.patch, ASF.LICENSE.NOT.GRANTED--D447.11.patch, ASF.LICENSE.NOT.GRANTED--D447.12.patch, ASF.LICENSE.NOT.GRANTED--D447.13.patch, ASF.LICENSE.NOT.GRANTED--D447.14.patch, ASF.LICENSE.NOT.GRANTED--D447.15.patch, ASF.LICENSE.NOT.GRANTED--D447.16.patch, ASF.LICENSE.NOT.GRANTED--D447.17.patch, ASF.LICENSE.NOT.GRANTED--D447.18.patch, ASF.LICENSE.NOT.GRANTED--D447.19.patch, ASF.LICENSE.NOT.GRANTED--D447.2.patch, ASF.LICENSE.NOT.GRANTED--D447.20.patch, ASF.LICENSE.NOT.GRANTED--D447.21.patch, ASF.LICENSE.NOT.GRANTED--D447.22.patch, ASF.LICENSE.NOT.GRANTED--D447.23.patch, ASF.LICENSE.NOT.GRANTED--D447.24.patch, ASF.LICENSE.NOT.GRANTED--D447.25.patch, ASF.LICENSE.NOT.GRANTED--D447.26.patch, ASF.LICENSE.NOT.GRANTED--D447.3.patch, ASF.LICENSE.NOT.GRANTED--D447.4.patch, ASF.LICENSE.NOT.GRANTED--D447.5.patch, ASF.LICENSE.NOT.GRANTED--D447.6.patch, ASF.LICENSE.NOT.GRANTED--D447.7.patch, ASF.LICENSE.NOT.GRANTED--D447.8.patch, ASF.LICENSE.NOT.GRANTED--D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding-2012-01-17_11_09_09.patch, Delta-encoding-2012-01-25_00_45_29.patch, Delta-encoding-2012-01-25_16_32_14.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message was sent by Atlassian JIRA (v6.1.4#6159)
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Release Note: Adds a block compression that stores the diff from the previous key only. Good for big keys and small value datasets. Makes writing and scanning slower but because the blocks compressed with this feature stay compressed when in memory up in the block cache, more data is cached. Off by default (DATA_BLOCK_ENCODING=NONE on column descriptor). To enable, set DATA_BLOCK_ENCODING to PREFIX, DIFF or FAST_DIFF on the column descriptor. Set ENCODE_ON_DISK to true on column descriptor to have the encoding in place out in the hfile (on by default). (was: Adds a block compression that stores the diff from the previous key only. Good for big keys and small value datasets. Makes writing and scanning slower but because the blocks compressed with this feature stay compressed when in memory up in the block cache, more data is cached. Off by default. To enable, on the column descriptor set DATA_BLOCK_ENCODING to NONE, PREFIX, DIFF or FAST_DIFF. Set ENCODE_ON_DISK to true on column descriptor to have the encoding in place out in the hfile (on by default).) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, D1659.1.patch, D1659.2.patch, D1659.3.patch, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.24.patch, D447.25.patch, D447.26.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding-2012-01-17_11_09_09.patch, Delta-encoding-2012-01-25_00_45_29.patch, Delta-encoding-2012-01-25_16_32_14.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D1659.3.patch mbautin updated the revision [jira] [HBASE-4218] [89-fb] Porting HFile data block encoding to 89-fb. Reviewers: Kannan, Karthik, nspiegelberg, gqchen, JIRA Addressing Kannan's comment (removing a merge conflict from a javadoc in HFileBlock). REVISION DETAIL https://reviews.facebook.net/D1659 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/client/HBaseAdmin.java src/main/java/org/apache/hadoop/hbase/client/Result.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/RegionServerMetrics.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/java/org/apache/hadoop/hbase/util/CompoundBloomFilter.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/TestKeyValue.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestUpgradeFromHFileV1ToEncoding.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFile.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Resolution: Fixed Hadoop Flags: Reviewed Status: Resolved (was: Patch Available) With HBASE-5387, this issue can be resolved. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, D1659.1.patch, D1659.2.patch, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.24.patch, D447.25.patch, D447.26.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding-2012-01-17_11_09_09.patch, Delta-encoding-2012-01-25_00_45_29.patch, Delta-encoding-2012-01-25_16_32_14.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D1659.2.patch mbautin updated the revision [jira] [HBASE-4218] [89-fb] Porting HFile data block encoding to 89-fb. Reviewers: Kannan, Karthik, nspiegelberg, gqchen, JIRA Fixing DataBlockEncodingTool. Block-level compression parameter was not being handled correctly. REVISION DETAIL https://reviews.facebook.net/D1659 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/client/HBaseAdmin.java src/main/java/org/apache/hadoop/hbase/client/Result.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/RegionServerMetrics.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/java/org/apache/hadoop/hbase/util/CompoundBloomFilter.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/TestKeyValue.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestUpgradeFromHFileV1ToEncoding.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFile.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D1659.1.patch mbautin requested code review of [jira] [HBASE-4218] [89-fb] Porting HFile data block encoding to 89-fb. Reviewers: Kannan, Karthik, nspiegelberg, gqchen, JIRA This is the 89-fb version of the data block encoding patch D447 (based on Jacek Midgal's work during his 2011 summer internship at Facebook). The trunk patch has already gone through an extensive review cycle. The purpose of this review is to sanity-check the port and hopefully catch some bugs. Please see the JIRA and the original patch for design/implementation details. TEST PLAN Unit tests, dev cluster, deploy and run load test REVISION DETAIL https://reviews.facebook.net/D1659 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/client/HBaseAdmin.java src/main/java/org/apache/hadoop/hbase/client/Result.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/RegionServerMetrics.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/java/org/apache/hadoop/hbase/util/CompoundBloomFilter.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/TestKeyValue.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Attachment: Delta-encoding-2012-01-25_00_45_29.patch Submitting for Jenkins testing. This corresponds to the latest patch on Phabricator: https://reviews.facebook.net/D447?vs=id=4407whitespace=ignore-all Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.24.patch, D447.25.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding-2012-01-17_11_09_09.patch, Delta-encoding-2012-01-25_00_45_29.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.26.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding framework and delta encoding implementation. Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Addressing Jerry's comments and rebasing on HBASE-5230 (ensuring that compactions do not cache data blocks on write). All unit tests pass. If there are no objections, I will commit this after final cluster testing. REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/java/org/apache/hadoop/hbase/util/CompoundBloomFilter.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/BROKE_TODO_FIX_TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/TestKeyValue.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestLoadAndSwitchEncodeOnDisk.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestUpgradeFromHFileV1ToEncoding.java src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Attachment: Delta-encoding-2012-01-25_16_32_14.patch Attaching a patch rebased on HBASE-5230 and addressing Jerry's new comment. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.24.patch, D447.25.patch, D447.26.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding-2012-01-17_11_09_09.patch, Delta-encoding-2012-01-25_00_45_29.patch, Delta-encoding-2012-01-25_16_32_14.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.25.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding framework and delta encoding implementation. Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Submitting what will hopefully become the final version of the patch, addressing Kannan's, Jerry's, and Ted's comments. I will still re-run all unit tests both on map-reduce and on the Jenkins server and do some final cluster testing. REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/java/org/apache/hadoop/hbase/util/CompoundBloomFilter.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/BROKE_TODO_FIX_TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/TestKeyValue.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestLoadAndSwitchEncodeOnDisk.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestUpgradeFromHFileV1ToEncoding.java src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.24.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding framework and delta encoding implementation. Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Addressing Ted's comments and removing two .rej files that somehow got into the patch. REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/java/org/apache/hadoop/hbase/util/CompoundBloomFilter.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/BROKE_TODO_FIX_TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestLoadAndSwitchEncodeOnDisk.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestUpgradeFromHFileV1ToEncoding.java src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFile.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Attachment: Delta-encoding-2012-01-17_11_09_09.patch Appending a patch that can be applied by Hadoop QA. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.24.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding-2012-01-17_11_09_09.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: -1 overall. Here are the results of testing the latest attachment http://issues.apache.org/jira/secure/attachment/12510870/D447.24.patch against trunk revision . +1 @author. The patch does not contain any @author tags. +1 tests included. The patch appears to include 137 new or modified tests. -1 patch. The patch command could not apply the patch. Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/792//console This message is automatically generated.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.24.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding-2012-01-17_11_09_09.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: -1 overall. Here are the results of testing the latest attachment http://issues.apache.org/jira/secure/attachment/12509638/D447.19.patch against trunk revision . +1 @author. The patch does not contain any @author tags. +1 tests included. The patch appears to include 131 new or modified tests. -1 patch. The patch command could not apply the patch. Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/678//console This message is automatically generated.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.24.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding-2012-01-17_11_09_09.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: -1 overall. Here are the results of testing the latest attachment http://issues.apache.org/jira/secure/attachment/12509651/D447.20.patch against trunk revision . +1 @author. The patch does not contain any @author tags. +1 tests included. The patch appears to include 133 new or modified tests. -1 patch. The patch command could not apply the patch. Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/680//console This message is automatically generated.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.24.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding-2012-01-17_11_09_09.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: -1 overall. Here are the results of testing the latest attachment http://issues.apache.org/jira/secure/attachment/12509333/D447.17.patch against trunk revision . +1 @author. The patch does not contain any @author tags. +1 tests included. The patch appears to include 111 new or modified tests. -1 patch. The patch command could not apply the patch. Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/654//console This message is automatically generated.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: -1 overall. Here are the results of testing the latest attachment http://issues.apache.org/jira/secure/attachment/12510557/D447.23.patch against trunk revision . +1 @author. The patch does not contain any @author tags. +1 tests included. The patch appears to include 137 new or modified tests. -1 patch. The patch command could not apply the patch. Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/758//console This message is automatically generated.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Attachment: 4218-2012-01-14.txt Latest patch from Phabricator Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-2012-01-14.txt, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.23.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.22.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding framework and delta encoding implementation. Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Fixing a critical bug in compactions with cache-on-write turned on when encoding is used in cache only. All unit tests pass. I also did the following cluster test: * Load LZO-compressed, PREFIX-encoded data, encoding on disk * Switch encoding on disk off, load some more data * Switch encoding on disk back on, load some more data * Run a manual compaction * Switch encoding type to FAST_DIFF, turn encoding on disk off, load some more data * Switch encoding type to DIFF, turn encoding on disk on, load some more data I kept an eye on the logs throughout the above manipulations and made sure that compaction errors I had seen before (with an unencoded scanner trying to read an encoded block) did not show up. @Kannan: did you want to take another look at the diff? REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/java/org/apache/hadoop/hbase/util/CompoundBloomFilter.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/BROKE_TODO_FIX_TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Attachment: Delta-encoding.patch-2012-01-13_12_20_07.patch Attaching a patch generated using git format-patch --no-prefix HEAD^..HEAD that can be applied by the normal patch command. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.21.patch, D447.22.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta-encoding.patch-2012-01-13_12_20_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.23.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding framework and delta encoding implementation. Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Adding HFileReadWriteTest (from HBASE-4516) and fixing it to work with delta encoding. We can close both JIRAs when this patch is committed. Also extending TestEncodedSeekers to do a compaction and verify that compaction does not cache unencoded blocks in encode-in-cache-only mode, even though it does operate on unencoded blocks in that mode to avoid permanent data corruption in case of a delta encoding bug. @tedyu: I will address your comments in the next version (to follow shortly). Kannan also wants to re-review the patch over the weekend, so please do not commit it yet. REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java.rej src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java.rej src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/java/org/apache/hadoop/hbase/util/CompoundBloomFilter.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/BROKE_TODO_FIX_TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Attachment: Delta-encoding.patch-2012-01-07_14_12_48.patch Attaching a patch rebased on trunk changes. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta-encoding.patch-2012-01-07_14_12_48.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.21.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding framework and delta encoding implementation. Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Fixing the -encode_in_cache_only option of LoadTestTool (it is still encode_in_cache_only, even though we use ENCODE_ON_DISK in the column family), and rebasing on most recent trunk changes. Unit tests still pass. REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/BROKE_TODO_FIX_TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestUpgradeFromHFileV1ToEncoding.java src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFile.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileDataBlockEncoder.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Attachment: Delta-encoding.patch-2012-01-05_15_16_43.patch Uploading a patch that should apply clearly. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Attachment: Delta-encoding.patch-2012-01-05_16_31_44.patch Fixing an NPE in EncodedSeekPerformanceTest. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.19.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding framework and delta encoding implementation. Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Fixing an NPE in EncodedSeekPerformanceTest (a test tool). REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/BROKE_TODO_FIX_TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFile.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFilePerformance.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileSeek.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileWriterV2.java src/test/java/org/apache/hadoop/hbase/mapreduce/TestImportExport.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Attachment: Delta-encoding.patch-2012-01-05_16_31_44_copy.patch Attaching a patch that applies. (A new unit test is coming for HFile v1 to encoded HFile v2 upgrade, so the patch is not final yet.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.20.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding framework and delta encoding implementation. Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Adding a new unit test that upgrades from HFile v1 to an HFile v2 with data block encoding turned on, as per Todd's suggestion. REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockCacheKey.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/BROKE_TODO_FIX_TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestChangingEncoding.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestUpgradeFromHFileV1ToEncoding.java src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFile.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFilePerformance.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Mikhail Bautin updated HBASE-4218: -- Attachment: Delta-encoding.patch-2012-01-05_18_50_47.patch Adding a test that upgrades from HFile v1 to encoded HFile v2. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.18.patch, D447.19.patch, D447.2.patch, D447.20.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta-encoding.patch-2012-01-05_15_16_43.patch, Delta-encoding.patch-2012-01-05_16_31_44.patch, Delta-encoding.patch-2012-01-05_16_31_44_copy.patch, Delta-encoding.patch-2012-01-05_18_50_47.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.17.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding framework and delta encoding implementation. Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Added another unit test doing a mini-cluster load test with data block encoding turned on. That helped find some bugs similar to those that I observed in 5-node cluster testing, and I added a smaller test reproducing the same bugs (TestEncodedSeekers). Fixed those bugs by correctly restoring additional state when going to previous key/value (previously, only the vanilla BufferedDataBlockEncoder.SeekerState was restored but not algorithm-specific state). I also had to remove BitsetKeyDeltaEncoder for now because I could not fix its encoded seeker yet (it seemed to have some more complicated bugs) but we are not planning to use that algorithm for now. Also, fixed the most recent comment by Ted and TestHFileBlock.testBlockHeapSize failure on a 32-bit JVM (thanks to Ted for pointing that out, too). REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/HConstants.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/CompactSplitThread.java src/main/java/org/apache/hadoop/hbase/regionserver/HRegion.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/BROKE_TODO_FIX_TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HBaseTestingUtility.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/TestAcidGuarantees.java src/test/java/org/apache/hadoop/hbase/client/TestAdmin.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestEncodedSeekers.java src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Attachment: 4218.txt Re-attaching latest patch from Mikhail for Hadoop QA. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Attachment: 4218.txt Removing offending chunk from HFilePerformanceEvaluation.java Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Attachment: (was: 4218.txt) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, 4218.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.17.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: -1 overall. Here are the results of testing the latest attachment http://issues.apache.org/jira/secure/attachment/12508190/D447.10.patch against trunk revision . +1 @author. The patch does not contain any @author tags. +1 tests included. The patch appears to include 65 new or modified tests. -1 patch. The patch command could not apply the patch. Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/563//console This message is automatically generated.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: -1 overall. Here are the results of testing the latest attachment http://issues.apache.org/jira/secure/attachment/12509028/D447.16.patch against trunk revision . +1 @author. The patch does not contain any @author tags. +1 tests included. The patch appears to include 104 new or modified tests. -1 patch. The patch command could not apply the patch. Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/649//console This message is automatically generated.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: -1 overall. Here are the results of testing the latest attachment http://issues.apache.org/jira/secure/attachment/12508801/D447.14.patch against trunk revision . +1 @author. The patch does not contain any @author tags. +1 tests included. The patch appears to include 68 new or modified tests. -1 patch. The patch command could not apply the patch. Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/618//console This message is automatically generated.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Attachment: 4218-v16.txt Patch v16 that applies cleanly. Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, 4218-v16.txt, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.16.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: -1 overall. Here are the results of testing the latest attachment http://issues.apache.org/jira/secure/attachment/12508818/D447.15.patch against trunk revision . +1 @author. The patch does not contain any @author tags. +1 tests included. The patch appears to include 68 new or modified tests. -1 patch. The patch command could not apply the patch. Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/621//console This message is automatically generated.) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.14.patch, D447.15.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.14.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding (delta encoding). Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Addressing Ted's comment and Matt's comments. REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BitsetKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileWriterV2.java src/test/java/org/apache/hadoop/hbase/mapreduce/TestImportExport.java src/test/java/org/apache/hadoop/hbase/regionserver/CreateRandomStoreFile.java src/test/java/org/apache/hadoop/hbase/regionserver/DataBlockEncodingTool.java src/test/java/org/apache/hadoop/hbase/regionserver/EncodedSeekPerformanceTest.java src/test/java/org/apache/hadoop/hbase/regionserver/TestCompactSelection.java src/test/java/org/apache/hadoop/hbase/regionserver/TestCompaction.java src/test/java/org/apache/hadoop/hbase/regionserver/TestCompoundBloomFilter.java src/test/java/org/apache/hadoop/hbase/regionserver/TestFSErrorsExposed.java src/test/java/org/apache/hadoop/hbase/regionserver/TestStoreFile.java src/test/java/org/apache/hadoop/hbase/util/LoadTestTool.java src/test/java/org/apache/hadoop/hbase/util/TestByteBufferUtils.java Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Phabricator updated HBASE-4218: --- Attachment: D447.15.patch mbautin updated the revision [jira] [HBASE-4218] HFile data block encoding (delta encoding). Reviewers: JIRA, tedyu, stack, nspiegelberg, Kannan Simplifying user-facing data block encoding knobs: * DATA_BLOCK_ENCODING specifies block encoding type * ENCODE_IN_CACHE_ONLY can be set to true to avoid encoding data blocks on disk. This is false by default (i.e. we encode blocks everywhere by default if DATA_BLOCK_ENCODING is specified). REVISION DETAIL https://reviews.facebook.net/D447 AFFECTED FILES src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java src/main/java/org/apache/hadoop/hbase/KeyValue.java src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java src/main/java/org/apache/hadoop/hbase/io/encoding/BitsetKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoding.java src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java src/main/java/org/apache/hadoop/hbase/regionserver/Store.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java src/main/ruby/hbase/admin.rb src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileDataBlockEncoder.java src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileWriterV2.java src/test/java/org/apache/hadoop/hbase/mapreduce/TestImportExport.java src/test/java/org/apache/hadoop/hbase/regionserver/CreateRandomStoreFile.java src/test/java/org/apache/hadoop/hbase/regionserver/DataBlockEncodingTool.java src/test/java/org/apache/hadoop/hbase/regionserver/EncodedSeekPerformanceTest.java src/test/java/org/apache/hadoop/hbase/regionserver/TestCompactSelection.java src/test/java/org/apache/hadoop/hbase/regionserver/TestCompaction.java src/test/java/org/apache/hadoop/hbase/regionserver/TestCompoundBloomFilter.java src/test/java/org/apache/hadoop/hbase/regionserver/TestFSErrorsExposed.java
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: Integrated in HBase-TRUNK #2576 (See [https://builds.apache.org/job/HBase-TRUNK/2576/]) HBASE-4218 Data Block Encoding of KeyValues - revert, problems were uncovered during cluster testing tedyu : Files : * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/KeyValue.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/BitsetKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncodings.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/Store.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java * /hbase/trunk/src/main/ruby/hbase/admin.rb * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileDataBlockEncoder.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileWriterV2.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/mapreduce/TestImportExport.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/regionserver/CreateRandomStoreFile.java *
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: Integrated in HBase-TRUNK-security #48 (See [https://builds.apache.org/job/HBase-TRUNK-security/48/]) HBASE-4218 Data Block Encoding of KeyValues - revert, problems were uncovered during cluster testing tedyu : Files : * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/KeyValue.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/BitsetKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncodings.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/Store.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java * /hbase/trunk/src/main/ruby/hbase/admin.rb * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileDataBlockEncoder.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileWriterV2.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/mapreduce/TestImportExport.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/regionserver/CreateRandomStoreFile.java *
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: Integrated in HBase-TRUNK-security #47 (See [https://builds.apache.org/job/HBase-TRUNK-security/47/]) HBASE-4218 Data Block Encoding of KeyValues (aka delta encoding / prefix compression) - files used for testing HBASE-4218 Data Block Encoding of KeyValues (aka delta encoding / prefix compression) (Jacek, Mikhail) tedyu : Files : * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java tedyu : Files : * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/KeyValue.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/BitsetKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncodings.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/Store.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java * /hbase/trunk/src/main/ruby/hbase/admin.rb * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileDataBlockEncoder.java *
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Comment: was deleted (was: Integrated in HBase-TRUNK #2573 (See [https://builds.apache.org/job/HBase-TRUNK/2573/]) HBASE-4218 Data Block Encoding of KeyValues (aka delta encoding / prefix compression) - files used for testing HBASE-4218 Data Block Encoding of KeyValues (aka delta encoding / prefix compression) (Jacek, Mikhail) tedyu : Files : * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/RedundantKVGenerator.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/TestBufferedDataBlockEncoder.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/encoding/TestDataBlockEncoders.java tedyu : Files : * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/KeyValue.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/BitsetKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/BufferedDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/CompressionState.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/CopyKeyDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DataBlockEncodings.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/DiffKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/EncodedDataBlock.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/EncoderBufferTooSmallException.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileWriter.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/BlockType.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlockIndex.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileDataBlockEncoderImpl.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFilePrettyPrinter.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV1.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV1.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileWriterV2.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/LruBlockCache.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/io/hfile/NoOpDataBlockEncoder.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/mapreduce/LoadIncrementalHFiles.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/MemStore.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/Store.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFile.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/regionserver/metrics/SchemaConfigured.java * /hbase/trunk/src/main/java/org/apache/hadoop/hbase/util/ByteBufferUtils.java * /hbase/trunk/src/main/ruby/hbase/admin.rb * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/HBaseTestCase.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/HFilePerformanceEvaluation.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/client/TestFromClientSide.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/TestHalfStoreFileReader.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/TestHeapSize.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/CacheTestUtils.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestCacheOnWrite.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlock.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileBlockIndex.java * /hbase/trunk/src/test/java/org/apache/hadoop/hbase/io/hfile/TestHFileDataBlockEncoder.java *
[jira] [Updated] (HBASE-4218) Data Block Encoding of KeyValues (aka delta encoding / prefix compression)
[ https://issues.apache.org/jira/browse/HBASE-4218?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Zhihong Yu updated HBASE-4218: -- Fix Version/s: 0.94.0 Summary: Data Block Encoding of KeyValues (aka delta encoding / prefix compression) (was: Delta Encoding of KeyValues (aka prefix compression)) Data Block Encoding of KeyValues (aka delta encoding / prefix compression) --- Key: HBASE-4218 URL: https://issues.apache.org/jira/browse/HBASE-4218 Project: HBase Issue Type: Improvement Components: io Affects Versions: 0.94.0 Reporter: Jacek Migdal Assignee: Mikhail Bautin Labels: compression Fix For: 0.94.0 Attachments: 0001-Delta-encoding-fixed-encoded-scanners.patch, 0001-Delta-encoding.patch, D447.1.patch, D447.10.patch, D447.11.patch, D447.12.patch, D447.13.patch, D447.2.patch, D447.3.patch, D447.4.patch, D447.5.patch, D447.6.patch, D447.7.patch, D447.8.patch, D447.9.patch, Data-block-encoding-2011-12-23.patch, Delta-encoding.patch-2011-12-22_11_52_07.patch, Delta_encoding_with_memstore_TS.patch, open-source.diff A compression for keys. Keys are sorted in HFile and they are usually very similar. Because of that, it is possible to design better compression than general purpose algorithms, It is an additional step designed to be used in memory. It aims to save memory in cache as well as speeding seeks within HFileBlocks. It should improve performance a lot, if key lengths are larger than value lengths. For example, it makes a lot of sense to use it when value is a counter. Initial tests on real data (key length = ~ 90 bytes , value length = 8 bytes) shows that I could achieve decent level of compression: key compression ratio: 92% total compression ratio: 85% LZO on the same data: 85% LZO after delta encoding: 91% While having much better performance (20-80% faster decompression ratio than LZO). Moreover, it should allow far more efficient seeking which should improve performance a bit. It seems that a simple compression algorithms are good enough. Most of the savings are due to prefix compression, int128 encoding, timestamp diffs and bitfields to avoid duplication. That way, comparisons of compressed data can be much faster than a byte comparator (thanks to prefix compression and bitfields). In order to implement it in HBase two important changes in design will be needed: -solidify interface to HFileBlock / HFileReader Scanner to provide seeking and iterating; access to uncompressed buffer in HFileBlock will have bad performance -extend comparators to support comparison assuming that N first bytes are equal (or some fields are equal) Link to a discussion about something similar: http://search-hadoop.com/m/5aqGXJEnaD1/hbase+windowssubj=Re+prefix+compression -- This message is automatically generated by JIRA. If you think it was sent incorrectly, please contact your JIRA administrators: https://issues.apache.org/jira/secure/ContactAdministrators!default.jspa For more information on JIRA, see: http://www.atlassian.com/software/jira
