James Eastwood created SPARK-12714: -------------------------------------- Summary: Transforming Dataset with sequences of case classes to RDD causes Task Not Serializable exception Key: SPARK-12714 URL: https://issues.apache.org/jira/browse/SPARK-12714 Project: Spark Issue Type: Bug Components: SQL Affects Versions: 1.6.0 Environment: linux 3.13.0-24-generic, scala 2.10.6 Reporter: James Eastwood
Attempting to transform a Dataset of a case class containing a nested sequence of case classes causes an exception to be thrown: `org.apache.spark.SparkException: Task not serializable`. Here is a minimum repro: {code} import org.apache.spark.sql.SQLContext import org.apache.spark.{SparkContext, SparkConf} case class Top(a: String, nested: Array[Nested]) case class Nested(b: String) object scratch { def main ( args: Array[String] ) { lazy val sparkConf = new SparkConf().setAppName("scratch").setMaster("local[1]") lazy val sparkContext = new SparkContext(sparkConf) lazy val sqlContext = new SQLContext(sparkContext) val input = List( """{ "a": "123", "nested": [{ "b": "123" }] }""" ) import sqlContext.implicits._ val ds = sqlContext.read.json(sparkContext.parallelize(input)).as[Top] ds.rdd.foreach(println) sparkContext.stop() } } {code} {code} scalaVersion := "2.10.6" lazy val sparkVersion = "1.6.0" libraryDependencies ++= List( "org.apache.spark" %% "spark-core" % sparkVersion % "provided", "org.apache.spark" %% "spark-sql" % sparkVersion % "provided", "org.apache.spark" %% "spark-hive" % sparkVersion % "provided" ) {code} Full stack trace: {code} [error] (run-main-0) org.apache.spark.SparkException: Task not serializable org.apache.spark.SparkException: Task not serializable at org.apache.spark.util.ClosureCleaner$.ensureSerializable(ClosureCleaner.scala:304) at org.apache.spark.util.ClosureCleaner$.org$apache$spark$util$ClosureCleaner$$clean(ClosureCleaner.scala:294) at org.apache.spark.util.ClosureCleaner$.clean(ClosureCleaner.scala:122) at org.apache.spark.SparkContext.clean(SparkContext.scala:2055) at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1.apply(RDD.scala:707) at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1.apply(RDD.scala:706) at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150) at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111) at org.apache.spark.rdd.RDD.withScope(RDD.scala:316) at org.apache.spark.rdd.RDD.mapPartitions(RDD.scala:706) at org.apache.spark.sql.Dataset.rdd(Dataset.scala:166) at scratch$.main(scratch.scala:26) at scratch.main(scratch.scala) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) Caused by: java.io.NotSerializableException: scala.reflect.internal.Mirrors$Roots$EmptyPackageClass$ Serialization stack: - object not serializable (class: scala.reflect.internal.Mirrors$Roots$EmptyPackageClass$, value: package <empty>) - field (class: scala.reflect.internal.Types$ThisType, name: sym, type: class scala.reflect.internal.Symbols$Symbol) - object (class scala.reflect.internal.Types$UniqueThisType, <empty>) - field (class: scala.reflect.internal.Types$TypeRef, name: pre, type: class scala.reflect.internal.Types$Type) - object (class scala.reflect.internal.Types$TypeRef$$anon$6, Nested) - field (class: org.apache.spark.sql.catalyst.ScalaReflection$$anonfun$org$apache$spark$sql$catalyst$ScalaReflection$$constructorFor$2, name: elementType$1, type: class scala.reflect.api.Types$TypeApi) - object (class org.apache.spark.sql.catalyst.ScalaReflection$$anonfun$org$apache$spark$sql$catalyst$ScalaReflection$$constructorFor$2, <function0>) - field (class: org.apache.spark.sql.catalyst.ScalaReflection$$anonfun$org$apache$spark$sql$catalyst$ScalaReflection$$constructorFor$2$$anonfun$apply$1, name: $outer, type: class org.apache.spark.sql.catalyst.ScalaReflection$$anonfun$org$apache$spark$sql$catalyst$ScalaReflection$$constructorFor$2) - object (class org.apache.spark.sql.catalyst.ScalaReflection$$anonfun$org$apache$spark$sql$catalyst$ScalaReflection$$constructorFor$2$$anonfun$apply$1, <function1>) - field (class: org.apache.spark.sql.catalyst.expressions.MapObjects, name: function, type: interface scala.Function1) - object (class org.apache.spark.sql.catalyst.expressions.MapObjects, mapobjects(<function1>,input[1, ArrayType(StructType(StructField(b,StringType,true)),true)],StructField(b,StringType,true))) - field (class: org.apache.spark.sql.catalyst.expressions.Invoke, name: targetObject, type: class org.apache.spark.sql.catalyst.expressions.Expression) - object (class org.apache.spark.sql.catalyst.expressions.Invoke, invoke(mapobjects(<function1>,input[1, ArrayType(StructType(StructField(b,StringType,true)),true)],StructField(b,StringType,true)),array,ObjectType(class [LNested;))) - writeObject data (class: scala.collection.immutable.$colon$colon) - object (class scala.collection.immutable.$colon$colon, List(invoke(input[0, StringType],toString,ObjectType(class java.lang.String)), invoke(mapobjects(<function1>,input[1, ArrayType(StructType(StructField(b,StringType,true)),true)],StructField(b,StringType,true)),array,ObjectType(class [LNested;)))) - field (class: org.apache.spark.sql.catalyst.expressions.NewInstance, name: arguments, type: interface scala.collection.Seq) - object (class org.apache.spark.sql.catalyst.expressions.NewInstance, newinstance(class Top,invoke(input[0, StringType],toString,ObjectType(class java.lang.String)),invoke(mapobjects(<function1>,input[1, ArrayType(StructType(StructField(b,StringType,true)),true)],StructField(b,StringType,true)),array,ObjectType(class [LNested;)),false,ObjectType(class Top),None)) - field (class: org.apache.spark.sql.catalyst.encoders.ExpressionEncoder, name: fromRowExpression, type: class org.apache.spark.sql.catalyst.expressions.Expression) - object (class org.apache.spark.sql.catalyst.encoders.ExpressionEncoder, class[a[0]: string, nested#ExprId(4,bc90ecfb-37ae-45bd-b0a1-7365a1a233d1): array<struct<b:string>>]) - field (class: org.apache.spark.sql.Dataset, name: boundTEncoder, type: class org.apache.spark.sql.catalyst.encoders.ExpressionEncoder) - object (class org.apache.spark.sql.Dataset, [a: string, nested: array<struct<b:string>>]) - field (class: org.apache.spark.sql.Dataset$$anonfun$rdd$1, name: $outer, type: class org.apache.spark.sql.Dataset) - object (class org.apache.spark.sql.Dataset$$anonfun$rdd$1, <function1>) at org.apache.spark.serializer.SerializationDebugger$.improveException(SerializationDebugger.scala:40) at org.apache.spark.serializer.JavaSerializationStream.writeObject(JavaSerializer.scala:47) at org.apache.spark.serializer.JavaSerializerInstance.serialize(JavaSerializer.scala:101) at org.apache.spark.util.ClosureCleaner$.ensureSerializable(ClosureCleaner.scala:301) at org.apache.spark.util.ClosureCleaner$.org$apache$spark$util$ClosureCleaner$$clean(ClosureCleaner.scala:294) at org.apache.spark.util.ClosureCleaner$.clean(ClosureCleaner.scala:122) at org.apache.spark.SparkContext.clean(SparkContext.scala:2055) at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1.apply(RDD.scala:707) at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1.apply(RDD.scala:706) at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150) at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111) at org.apache.spark.rdd.RDD.withScope(RDD.scala:316) at org.apache.spark.rdd.RDD.mapPartitions(RDD.scala:706) at org.apache.spark.sql.Dataset.rdd(Dataset.scala:166) at scratch$.main(scratch.scala:26) at scratch.main(scratch.scala) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) {code} Given the messages surrounding Datasets supporting only primitive types and case classes I'm not 100% sure this is a bug or just as-yet unsupported. -- This message was sent by Atlassian JIRA (v6.3.4#6332) --------------------------------------------------------------------- To unsubscribe, e-mail: issues-unsubscr...@spark.apache.org For additional commands, e-mail: issues-h...@spark.apache.org