holdenk created SPARK-16720:
-------------------------------
Summary: Loading CSV file with 2k+ columns and writing result with
one selected column fails during attribute resolution
Key: SPARK-16720
URL: https://issues.apache.org/jira/browse/SPARK-16720
Project: Spark
Issue Type: Bug
Components: SQL
Affects Versions: 2.0.0
Reporter: holdenk
Example shell for repro:
{quote}
scala> val df =spark.read.format("csv").option("header",
"true").option("inferSchema", "true").load("/home/holden/Downloads/ex*.csv")
df: org.apache.spark.sql.DataFrame = [Date: string, Lifetime Total Likes: int
... 2125 more fields]
scala> df.schema
res0: org.apache.spark.sql.types.StructType =
StructType(StructField(Date,StringType,true), StructField(Lifetime Total
Likes,IntegerType,true), StructField(Daily New Likes,IntegerType,true),
StructField(Daily Unlikes,IntegerType,true), StructField(Daily Page Engaged
Users,IntegerType,true), StructField(Weekly Page Engaged
Users,IntegerType,true), StructField(28 Days Page Engaged
Users,IntegerType,true), StructField(Daily Like Sources - On Your
Page,IntegerType,true), StructField(Daily Total Reach,IntegerType,true),
StructField(Weekly Total Reach,IntegerType,true), StructField(28 Days Total
Reach,IntegerType,true), StructField(Daily Organic Reach,IntegerType,true),
StructField(Weekly Organic Reach,IntegerType,true), StructField(28 Days Organic
Reach,IntegerType,true), StructField(Daily T...
scala> df.take(1)
[GIANT LIST OF COLUMNS]
at
org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolve$1$$anonfun$apply$5.apply(LogicalPlan.scala:134)
at
org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolve$1$$anonfun$apply$5.apply(LogicalPlan.scala:134)
at scala.Option.getOrElse(Option.scala:121)
at
org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolve$1.apply(LogicalPlan.scala:133)
at
org.apache.spark.sql.catalyst.plans.logical.LogicalPlan$$anonfun$resolve$1.apply(LogicalPlan.scala:129)
at
scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:234)
at
scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:234)
at scala.collection.Iterator$class.foreach(Iterator.scala:893)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1336)
at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)
at org.apache.spark.sql.types.StructType.foreach(StructType.scala:95)
at scala.collection.TraversableLike$class.map(TraversableLike.scala:234)
at org.apache.spark.sql.types.StructType.map(StructType.scala:95)
at
org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.resolve(LogicalPlan.scala:129)
at
org.apache.spark.sql.execution.datasources.FileSourceStrategy$.apply(FileSourceStrategy.scala:87)
at
org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:60)
at
org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:60)
at scala.collection.Iterator$$anon$12.nextCur(Iterator.scala:434)
at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)
at
org.apache.spark.sql.catalyst.planning.QueryPlanner.plan(QueryPlanner.scala:61)
at org.apache.spark.sql.execution.SparkPlanner.plan(SparkPlanner.scala:47)
at
org.apache.spark.sql.execution.SparkPlanner$$anonfun$plan$1$$anonfun$apply$1.applyOrElse(SparkPlanner.scala:51)
at
org.apache.spark.sql.execution.SparkPlanner$$anonfun$plan$1$$anonfun$apply$1.applyOrElse(SparkPlanner.scala:48)
at
org.apache.spark.sql.catalyst.trees.TreeNode$$anonfun$transformUp$1.apply(TreeNode.scala:301)
at
org.apache.spark.sql.catalyst.trees.TreeNode$$anonfun$transformUp$1.apply(TreeNode.scala:301)
at
org.apache.spark.sql.catalyst.trees.CurrentOrigin$.withOrigin(TreeNode.scala:69)
at
org.apache.spark.sql.catalyst.trees.TreeNode.transformUp(TreeNode.scala:300)
at
org.apache.spark.sql.catalyst.trees.TreeNode$$anonfun$4.apply(TreeNode.scala:298)
at
org.apache.spark.sql.catalyst.trees.TreeNode$$anonfun$4.apply(TreeNode.scala:298)
at
org.apache.spark.sql.catalyst.trees.TreeNode$$anonfun$5.apply(TreeNode.scala:321)
at
org.apache.spark.sql.catalyst.trees.TreeNode.mapProductIterator(TreeNode.scala:179)
at
org.apache.spark.sql.catalyst.trees.TreeNode.transformChildren(TreeNode.scala:319)
at
org.apache.spark.sql.catalyst.trees.TreeNode.transformUp(TreeNode.scala:298)
at
org.apache.spark.sql.execution.SparkPlanner$$anonfun$plan$1.apply(SparkPlanner.scala:48)
at
org.apache.spark.sql.execution.SparkPlanner$$anonfun$plan$1.apply(SparkPlanner.scala:48)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)
at
org.apache.spark.sql.execution.QueryExecution.sparkPlan$lzycompute(QueryExecution.scala:78)
at
org.apache.spark.sql.execution.QueryExecution.sparkPlan(QueryExecution.scala:76)
at
org.apache.spark.sql.execution.QueryExecution.executedPlan$lzycompute(QueryExecution.scala:83)
at
org.apache.spark.sql.execution.QueryExecution.executedPlan(QueryExecution.scala:83)
at org.apache.spark.sql.Dataset.withTypedCallback(Dataset.scala:2558)
at org.apache.spark.sql.Dataset.head(Dataset.scala:1924)
at org.apache.spark.sql.Dataset.take(Dataset.scala:2139)
... 48 elided
{quote}
Interestingly enough attempting to access row by index also fails in column
resolution phase or converting to an RDD also fails.
Loading without header on succeeds.
csv file for repro (on dropbox):
https://www.dropbox.com/s/f8453txcej43mz4/example_facebook.csv?dl=0
--
This message was sent by Atlassian JIRA
(v6.3.4#6332)
---------------------------------------------------------------------
To unsubscribe, e-mail: issues-unsubscr...@spark.apache.org
For additional commands, e-mail: issues-h...@spark.apache.org
