Garret Wilson created SPARK-40541:
-------------------------------------
Summary: NullPointerException with UTF8String.getBaseObject() when
UDF
Key: SPARK-40541
URL: https://issues.apache.org/jira/browse/SPARK-40541
Project: Spark
Issue Type: Bug
Components: Spark Core
Affects Versions: 3.3.0
Reporter: Garret Wilson
I'm using Spark 3.3.0 on Windows with Java 17. I have a UDF that returns
several columns using:
{code}
StructType schema = createStructType(List.of(… createStructField("bar",
StringType, false)));
UserDefinedFunction foobarUdf = udf((String foo) -> {
…
}, schema).asNondeterministic();
{code}
Note that I specify {{false}} for {{bar}}'s nullability. It turns out that
{{foobarUdf}} actually returns {{null}} for {{bar}} sometimes. In the
relational database world, I would expect that my integrity constraint wasn't
met, and the database would say, "you put {{null}} in {{bar}}, but {{bar}} is
not nullable".
What I did _not_ expect is what Spark does: it hits a {{NullPointerException}}
and has a nervous breakdown:
{noformat}
[ERROR] Exception in task 0.0 in stage 8.0 (TID 5)
java.lang.NullPointerException: Cannot invoke
"org.apache.spark.unsafe.types.UTF8String.getBaseObject()" because "input" is
null
at
org.apache.spark.sql.catalyst.expressions.codegen.UnsafeWriter.write(UnsafeWriter.java:110)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown
Source)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown
Source)
at scala.collection.Iterator$$anon$9.next(Iterator.scala:577)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.hashAgg_doAggregateWithoutKey_1$(Unknown
Source)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.hashAgg_doAggregateWithoutKey_0$(Unknown
Source)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.processNext(Unknown
Source)
at
org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at
org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:760)
at
org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:364)
at
org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:890)
at
org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:890)
at
org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:365)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:329)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:136)
at
org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:548)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1504)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:551)
at
java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
at
java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
at java.base/java.lang.Thread.run(Thread.java:833)
[WARN] Lost task 0.0 in stage 8.0 (TID 5) (xps-13-9310 executor driver):
java.lang.NullPointerException: Cannot invoke
"org.apache.spark.unsafe.types.UTF8String.getBaseObject()" because "input" is
null
at
org.apache.spark.sql.catalyst.expressions.codegen.UnsafeWriter.write(UnsafeWriter.java:110)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown
Source)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown
Source)
at scala.collection.Iterator$$anon$9.next(Iterator.scala:577)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.hashAgg_doAggregateWithoutKey_1$(Unknown
Source)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.hashAgg_doAggregateWithoutKey_0$(Unknown
Source)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.processNext(Unknown
Source)
at
org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at
org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:760)
at
org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:364)
at
org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:890)
at
org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:890)
at
org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:365)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:329)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:136)
at
org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:548)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1504)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:551)
at
java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
at
java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
at java.base/java.lang.Thread.run(Thread.java:833)
{noformat}
It finally fails with:
{noformat}
[ERROR] Job aborted due to stage failure: Task 0 in stage 8.0 failed 1 times,
most recent failure: Lost task 0.0 in stage 8.0 (TID 5) (xps-13-9310 executor
driver): java.lang.NullPointerException: Cannot invoke
"org.apache.spark.unsafe.types.UTF8String.getBaseObject()" because "input" is
null
at
org.apache.spark.sql.catalyst.expressions.codegen.UnsafeWriter.write(UnsafeWriter.java:110)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown
Source)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(Unknown
Source)
at scala.collection.Iterator$$anon$9.next(Iterator.scala:577)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.hashAgg_doAggregateWithoutKey_1$(Unknown
Source)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.hashAgg_doAggregateWithoutKey_0$(Unknown
Source)
at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.processNext(Unknown
Source)
at
org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at
org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:760)
at
org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:364)
at
org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:890)
at
org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:890)
at
org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:365)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:329)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:136)
at
org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:548)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1504)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:551)
at
java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
at
java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
at java.base/java.lang.Thread.run(Thread.java:833)
{noformat}
See also [Spark dies with NullPointerException UTF8String.getBaseObject()
"input" is null|https://stackoverflow.com/q/73815800].
The irony is that when I actually intend to mark a column as non-nullable when
reading in data, Spark ignores me. See [Spark 3.3.0 not honoring my schema
nullability in Java|https://stackoverflow.com/q/73476202].
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