[Jmol-commits] SF.net SVN: jmol:[20173] trunk/Jmol/src/org/jmol/shapesurface/ IsosurfaceMesh.java

2015-01-11 Thread hansonr
Revision: 20173 http://sourceforge.net/p/jmol/code/20173 Author: hansonr Date: 2015-01-11 21:20:52 + (Sun, 11 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/shapesurface/IsosurfaceMesh.java Modified: trunk/Jmol/src/org/jmol

[Jmol-commits] SF.net SVN: jmol:[20174] trunk/Jmol/src/org/jmol/script/ScriptEval.java

2015-01-11 Thread hansonr
Revision: 20174 http://sourceforge.net/p/jmol/code/20174 Author: hansonr Date: 2015-01-11 21:21:21 + (Sun, 11 Jan 2015) Log Message: --- color mo xxx fails Modified Paths: -- trunk/Jmol/src/org/jmol/script/ScriptEval.java Modified: trunk/Jmol/src/org

[Jmol-commits] SF.net SVN: jmol:[20175] trunk/Jmol/src/org/jmol/rendersurface/ IsosurfaceRenderer.java

2015-01-11 Thread hansonr
Revision: 20175 http://sourceforge.net/p/jmol/code/20175 Author: hansonr Date: 2015-01-11 21:22:00 + (Sun, 11 Jan 2015) Log Message: --- better showTriangles Modified Paths: -- trunk/Jmol/src/org/jmol/rendersurface/IsosurfaceRenderer.java Modified

[Jmol-commits] SF.net SVN: jmol:[20177] trunk/Jmol/src/javajs/util/M4.java

2015-01-11 Thread hansonr
Revision: 20177 http://sourceforge.net/p/jmol/code/20177 Author: hansonr Date: 2015-01-11 21:23:27 + (Sun, 11 Jan 2015) Log Message: --- comments only Modified Paths: -- trunk/Jmol/src/javajs/util/M4.java Modified: trunk/Jmol/src/javajs/util/M4.java

[Jmol-commits] SF.net SVN: jmol:[20178] trunk/Jmol/src/org/jmol/scriptext/CmdExt.java

2015-01-11 Thread hansonr
Revision: 20178 http://sourceforge.net/p/jmol/code/20178 Author: hansonr Date: 2015-01-11 21:33:25 + (Sun, 11 Jan 2015) Log Message: --- capture with filename of xxx.gif (three letters) doesn't stream Modified Paths: -- trunk/Jmol/src/org/jmol/scri

[Jmol-commits] SF.net SVN: jmol:[20179] trunk/Jmol/src/org/jmol/util/MeshCapper.java

2015-01-11 Thread hansonr
Revision: 20179 http://sourceforge.net/p/jmol/code/20179 Author: hansonr Date: 2015-01-11 22:17:17 + (Sun, 11 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/util/MeshCapper.java Modified: trunk/Jmol/src/org/jmol/util

[Jmol-commits] SF.net SVN: jmol:[20180] trunk/Jmol/src/org/jmol/util/MeshCapper.java

2015-01-11 Thread hansonr
Revision: 20180 http://sourceforge.net/p/jmol/code/20180 Author: hansonr Date: 2015-01-11 22:41:12 + (Sun, 11 Jan 2015) Log Message: --- final MeshCapper Modified Paths: -- trunk/Jmol/src/org/jmol/util/MeshCapper.java Modified: trunk/Jmol/src/org/jmol

[Jmol-commits] SF.net SVN: jmol:[20182] trunk/Jmol/srcjsv/jspecview

2015-01-11 Thread hansonr
Revision: 20182 http://sourceforge.net/p/jmol/code/20182 Author: hansonr Date: 2015-01-12 00:05:33 + (Mon, 12 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/srcjsv/jspecview/common/Annotation.java trunk/Jmol/srcjsv/jspecview/common

[Jmol-commits] SF.net SVN: jmol:[20186] trunk/Jmol/src/org/jmol/util/MeshCapper.java

2015-01-12 Thread hansonr
Revision: 20186 http://sourceforge.net/p/jmol/code/20186 Author: hansonr Date: 2015-01-12 17:42:19 + (Mon, 12 Jan 2015) Log Message: --- final MeshCapper Modified Paths: -- trunk/Jmol/src/org/jmol/util/MeshCapper.java Modified: trunk/Jmol/src/org/jmol

[Jmol-commits] SF.net SVN: jmol:[20187] trunk/Jmol/src/org/jmol

2015-01-12 Thread hansonr
Revision: 20187 http://sourceforge.net/p/jmol/code/20187 Author: hansonr Date: 2015-01-13 04:32:00 + (Tue, 13 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.11_2015.01.12" bug fix: color PMESH reader not working properly Modified Paths: --

[Jmol-commits] SF.net SVN: jmol:[20188] trunk/Jmol/src/org/jmol/g3d/Graphics3D.java

2015-01-12 Thread hansonr
Revision: 20188 http://sourceforge.net/p/jmol/code/20188 Author: hansonr Date: 2015-01-13 07:37:35 + (Tue, 13 Jan 2015) Log Message: --- Javascript bug Modified Paths: -- trunk/Jmol/src/org/jmol/g3d/Graphics3D.java Modified: trunk/Jmol/src/org/jmol/g3d

[Jmol-commits] SF.net SVN: jmol:[20190] trunk/Jmol/src/org/jmol

2015-01-13 Thread hansonr
Revision: 20190 http://sourceforge.net/p/jmol/code/20190 Author: hansonr Date: 2015-01-13 18:01:44 + (Tue, 13 Jan 2015) Log Message: --- PMESH fixes Modified Paths: -- trunk/Jmol/src/org/jmol/api/JmolRendererInterface.java trunk/Jmol/src/org/jmol

[Jmol-commits] SF.net SVN: jmol:[20191] trunk/Jmol/src/org/jmol

2015-01-13 Thread hansonr
Revision: 20191 http://sourceforge.net/p/jmol/code/20191 Author: hansonr Date: 2015-01-13 19:18:17 + (Tue, 13 Jan 2015) Log Message: --- Graphics3D optimizations with "this." Modified Paths: -- trunk/Jmol/src/org/jmol/api/JmolRendererInte

[Jmol-commits] SF.net SVN: jmol:[20193] trunk/Jmol/src/org/jmol/util/MeshCapper.java

2015-01-14 Thread hansonr
Revision: 20193 http://sourceforge.net/p/jmol/code/20193 Author: hansonr Date: 2015-01-14 15:43:53 + (Wed, 14 Jan 2015) Log Message: --- capper fix Modified Paths: -- trunk/Jmol/src/org/jmol/util/MeshCapper.java Modified: trunk/Jmol/src/org/jmol/util

[Jmol-commits] SF.net SVN: jmol:[20194] trunk/Jmol/src/org/jmol/util/MeshCapper.java

2015-01-14 Thread hansonr
Revision: 20194 http://sourceforge.net/p/jmol/code/20194 Author: hansonr Date: 2015-01-14 16:08:45 + (Wed, 14 Jan 2015) Log Message: --- capper fix Modified Paths: -- trunk/Jmol/src/org/jmol/util/MeshCapper.java Modified: trunk/Jmol/src/org/jmol/util

[Jmol-commits] SF.net SVN: jmol:[20195] trunk/Jmol/src/org/jmol/util/MeshCapper.java

2015-01-14 Thread hansonr
Revision: 20195 http://sourceforge.net/p/jmol/code/20195 Author: hansonr Date: 2015-01-14 17:24:30 + (Wed, 14 Jan 2015) Log Message: --- capper fix Modified Paths: -- trunk/Jmol/src/org/jmol/util/MeshCapper.java Modified: trunk/Jmol/src/org/jmol/util

[Jmol-commits] SF.net SVN: jmol:[20196] trunk/Jmol/src/org/jmol/util/MeshCapper.java

2015-01-14 Thread hansonr
Revision: 20196 http://sourceforge.net/p/jmol/code/20196 Author: hansonr Date: 2015-01-15 00:05:21 + (Thu, 15 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/util/MeshCapper.java Modified: trunk/Jmol/src/org/jmol/util

[Jmol-commits] SF.net SVN: jmol:[20197] trunk/Jmol/src/org/jmol

2015-01-15 Thread hansonr
Revision: 20197 http://sourceforge.net/p/jmol/code/20197 Author: hansonr Date: 2015-01-15 14:04:18 + (Thu, 15 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.11_2015.01.15" bug fix: modulation x.x and modulation n not described correctly in document

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2015-01-18 Thread hansonr
Revision: 20198 http://sourceforge.net/p/jmol/code/20198 Author: hansonr Date: 2015-01-19 01:26:43 + (Mon, 19 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.11_2015.01.18" new feature: Jmol Application Tools|NBO... (Experimental Only; requires

[Jmol-commits] SF.net SVN: jmol:[20199] trunk/Jmol/src/org/jmol

2015-01-18 Thread hansonr
Revision: 20199 http://sourceforge.net/p/jmol/code/20199 Author: hansonr Date: 2015-01-19 06:21:33 + (Mon, 19 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.11_2015.01.18" new feature: Jmol Application Tools|NBO... (Experimental Only; requires NBOSe

[Jmol-commits] SF.net SVN: jmol:[20200] trunk/Jmol/src/org/jmol/script/ScriptTokenParser. java

2015-01-18 Thread hansonr
Revision: 20200 http://sourceforge.net/p/jmol/code/20200 Author: hansonr Date: 2015-01-19 06:43:45 + (Mon, 19 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.11_2015.01.18" new feature: Jmol Application Tools|NBO... (Experimental Only; requires NBOSe

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2015-01-19 Thread hansonr
Revision: 20201 http://sourceforge.net/p/jmol/code/20201 Author: hansonr Date: 2015-01-19 16:00:50 + (Mon, 19 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.11_2015.01.19" new feature: select :"X" where quotes are used now forces case sens

[Jmol-commits] SF.net SVN: jmol:[20202] trunk/Jmol/src/org/jmol/g3d/TextRenderer.java

2015-01-19 Thread hansonr
Revision: 20202 http://sourceforge.net/p/jmol/code/20202 Author: hansonr Date: 2015-01-19 22:13:02 + (Mon, 19 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/g3d/TextRenderer.java Modified: trunk/Jmol/src/org/jmol/g3d

[Jmol-commits] SF.net SVN: jmol:[20203] trunk/Jmol/src/org/jmol/g3d/TextRenderer.java

2015-01-19 Thread hansonr
Revision: 20203 http://sourceforge.net/p/jmol/code/20203 Author: hansonr Date: 2015-01-19 22:17:33 + (Mon, 19 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/g3d/TextRenderer.java Modified: trunk/Jmol/src/org/jmol/g3d

[Jmol-commits] SF.net SVN: jmol:[20204] trunk/Jmol/src/org/jmol/scriptext/IsoExt.java

2015-01-19 Thread hansonr
Revision: 20204 http://sourceforge.net/p/jmol/code/20204 Author: hansonr Date: 2015-01-19 23:16:10 + (Mon, 19 Jan 2015) Log Message: --- oops - Dipoles lost. Modified Paths: -- trunk/Jmol/src/org/jmol/scriptext/IsoExt.java Modified: trunk/Jmol/src/org

[Jmol-commits] SF.net SVN: jmol:[20205] trunk/Jmol/src/org/jmol/viewer/Jmol.properties

2015-01-19 Thread hansonr
Revision: 20205 http://sourceforge.net/p/jmol/code/20205 Author: hansonr Date: 2015-01-19 23:16:42 + (Mon, 19 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.11_2015.01.19" new feature: select :"X" where quotes are used now forces case

[Jmol-commits] SF.net SVN: jmol:[20206] trunk/Jmol/src/org/jmol/shapespecial

2015-01-20 Thread hansonr
Revision: 20206 http://sourceforge.net/p/jmol/code/20206 Author: hansonr Date: 2015-01-20 13:32:23 + (Tue, 20 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/shapespecial/Dipole.java trunk/Jmol/src/org/jmol/shapespecial

[Jmol-commits] SF.net SVN: jmol:[20207] trunk/Jmol/tools/build-i18n.xml

2015-01-20 Thread hansonr
Revision: 20207 http://sourceforge.net/p/jmol/code/20207 Author: hansonr Date: 2015-01-20 17:32:23 + (Tue, 20 Jan 2015) Log Message: --- note about file locations Modified Paths: -- trunk/Jmol/tools/build-i18n.xml Modified: trunk/Jmol/tools/build

[Jmol-commits] SF.net SVN: jmol:[20208] trunk/Jmol/src/org/jmol/viewer/Jmol.properties

2015-01-20 Thread hansonr
Revision: 20208 http://sourceforge.net/p/jmol/code/20208 Author: hansonr Date: 2015-01-20 17:53:57 + (Tue, 20 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.11_2015.01.19" bug fix: Languages lost in Jmol Application new feature: select :"X&quo

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2015-01-20 Thread hansonr
Revision: 20209 http://sourceforge.net/p/jmol/code/20209 Author: hansonr Date: 2015-01-20 17:59:17 + (Tue, 20 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/viewer/Jmol.properties Modified: trunk/Jmol/src/org/jmol/viewer

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2015-01-20 Thread hansonr
Revision: 20210 http://sourceforge.net/p/jmol/code/20210 Author: hansonr Date: 2015-01-20 17:59:58 + (Tue, 20 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/build.xml Modified: trunk/Jmol/build.xml

[Jmol-commits] SF.net SVN: jmol:[20212] branches/v14_2/Jmol/build.xml

2015-01-20 Thread hansonr
Revision: 20212 http://sourceforge.net/p/jmol/code/20212 Author: hansonr Date: 2015-01-20 18:29:46 + (Tue, 20 Jan 2015) Log Message: --- Modified Paths: -- branches/v14_2/Jmol/build.xml Modified: branches/v14_2/Jmol/build.xml

[Jmol-commits] SF.net SVN: jmol:[20214] branches/v14_2/Jmol/jars/JSpecView.jar

2015-01-20 Thread hansonr
Revision: 20214 http://sourceforge.net/p/jmol/code/20214 Author: hansonr Date: 2015-01-20 18:36:29 + (Tue, 20 Jan 2015) Log Message: --- Modified Paths: -- branches/v14_2/Jmol/jars/JSpecView.jar Modified: branches/v14_2/Jmol/jars/JSpecView.jar

[Jmol-commits] SF.net SVN: jmol:[20213] branches/v14_2/Jmol/appletweb/jsmol.zip

2015-01-20 Thread hansonr
Revision: 20213 http://sourceforge.net/p/jmol/code/20213 Author: hansonr Date: 2015-01-20 18:36:25 + (Tue, 20 Jan 2015) Log Message: --- Modified Paths: -- branches/v14_2/Jmol/appletweb/jsmol.zip Modified: branches/v14_2/Jmol/appletweb/jsmol.zip

[Jmol-commits] SF.net SVN: jmol:[20216] branches/v14_2/Jmol/test/org/jmol/adapter/smarter/ TestSmarterJmolAdapter.java

2015-01-20 Thread hansonr
Revision: 20216 http://sourceforge.net/p/jmol/code/20216 Author: hansonr Date: 2015-01-20 19:01:46 + (Tue, 20 Jan 2015) Log Message: --- Modified Paths: -- branches/v14_2/Jmol/test/org/jmol/adapter/smarter/TestSmarterJmolAdapter.java Modified

[Jmol-commits] SF.net SVN: jmol:[20218] branches/v14_2/Jmol/src/org/jmol/viewer/Jmol. properties

2015-01-21 Thread hansonr
Revision: 20218 http://sourceforge.net/p/jmol/code/20218 Author: hansonr Date: 2015-01-21 12:50:07 + (Wed, 21 Jan 2015) Log Message: --- isosurface "capping" not "caching" Modified Paths: -- branches/v14_2/Jmol/src/org/jmol/vi

[Jmol-commits] SF.net SVN: jmol:[20217] trunk/Jmol/src/org/jmol/viewer/Jmol.properties

2015-01-21 Thread hansonr
Revision: 20217 http://sourceforge.net/p/jmol/code/20217 Author: hansonr Date: 2015-01-21 12:49:55 + (Wed, 21 Jan 2015) Log Message: --- isosurface "capping" not "caching" Modified Paths: -- trunk/Jmol/src/org/jmol/viewer/Jmol.

[Jmol-commits] SF.net SVN: jmol:[20219] trunk/Jmol/test/org/jmol/adapter/smarter/ TestSmarterJmolAdapter.java

2015-01-21 Thread hansonr
Revision: 20219 http://sourceforge.net/p/jmol/code/20219 Author: hansonr Date: 2015-01-21 12:54:58 + (Wed, 21 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/test/org/jmol/adapter/smarter/TestSmarterJmolAdapter.java Modified: trunk/Jmol/test

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2015-01-21 Thread hansonr
Revision: 20220 http://sourceforge.net/p/jmol/code/20220 Author: hansonr Date: 2015-01-21 13:15:26 + (Wed, 21 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol-datafiles/input/ch2chfme_reagent.inp Added Paths: --- trunk/Jmol

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2015-01-21 Thread hansonr
Revision: 20221 http://sourceforge.net/p/jmol/code/20221 Author: hansonr Date: 2015-01-21 13:16:06 + (Wed, 21 Jan 2015) Log Message: --- Added Paths: --- trunk/Jmol-datafiles/zmatrix/ch2chfme_reagent.inp Removed Paths: - trunk/Jmol

[Jmol-commits] SF.net SVN: jmol:[20222] trunk/Jmol/src/org/jmol/adapter/readers/simple/ InputReader.java

2015-01-21 Thread hansonr
Revision: 20222 http://sourceforge.net/p/jmol/code/20222 Author: hansonr Date: 2015-01-21 13:17:28 + (Wed, 21 Jan 2015) Log Message: --- allowing D12=180. as a single token Modified Paths: -- trunk/Jmol/src/org/jmol/adapter/readers/simple

[Jmol-commits] SF.net SVN: jmol:[20223] branches/v14_2/Jmol/buildfromtrunk.xml

2015-01-21 Thread hansonr
Revision: 20223 http://sourceforge.net/p/jmol/code/20223 Author: hansonr Date: 2015-01-21 13:47:02 + (Wed, 21 Jan 2015) Log Message: --- adds transfer of test suite Modified Paths: -- branches/v14_2/Jmol/buildfromtrunk.xml Modified: branches/v14_2/Jmol

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2015-01-21 Thread hansonr
Revision: 20224 http://sourceforge.net/p/jmol/code/20224 Author: hansonr Date: 2015-01-21 13:48:13 + (Wed, 21 Jan 2015) Log Message: --- Modified Paths: -- branches/v14_2/Jmol/appletweb/jsmol.zip Modified: branches/v14_2/Jmol/appletweb/jsmol.zip

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2015-01-21 Thread hansonr
Revision: 20225 http://sourceforge.net/p/jmol/code/20225 Author: hansonr Date: 2015-01-21 13:48:39 + (Wed, 21 Jan 2015) Log Message: --- fixed bad unicode Modified Paths: -- trunk/Jmol-datafiles/zmatrix/ch2chfme_reagent.inp Modified: trunk/Jmol

[Jmol-commits] SF.net SVN: jmol:[20226] trunk/Jmol

2015-01-21 Thread hansonr
Revision: 20226 http://sourceforge.net/p/jmol/code/20226 Author: hansonr Date: 2015-01-21 13:49:54 + (Wed, 21 Jan 2015) Log Message: --- allows test of forced file types Modified Paths: -- trunk/Jmol/src/org/jmol/api/JmolAdapter.java trunk/Jmol/test

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2015-01-21 Thread hansonr
Revision: 20227 http://sourceforge.net/p/jmol/code/20227 Author: hansonr Date: 2015-01-21 13:56:54 + (Wed, 21 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/appletweb/jsmol.zip Modified: trunk/Jmol/appletweb/jsmol.zip

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2015-01-21 Thread hansonr
Revision: 20228 http://sourceforge.net/p/jmol/code/20228 Author: hansonr Date: 2015-01-21 15:47:07 + (Wed, 21 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.21" bug fix: (JavaScript) using "Helvetica Neue, Sans-serif" instead

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2015-01-21 Thread hansonr
Revision: 20230 http://sourceforge.net/p/jmol/code/20230 Author: hansonr Date: 2015-01-21 18:35:35 + (Wed, 21 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.21" new feature: load =cod/141 loads Crystallographic Open Database CIF file

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2015-01-22 Thread hansonr
Revision: 20232 http://sourceforge.net/p/jmol/code/20232 Author: hansonr Date: 2015-01-22 22:41:59 + (Thu, 22 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/api/JmolGraphicsInterface.java trunk/Jmol/src/org/jmol/export

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2015-01-22 Thread hansonr
Revision: 20233 http://sourceforge.net/p/jmol/code/20233 Author: hansonr Date: 2015-01-22 22:43:01 + (Thu, 22 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/viewer/Jmol.properties Modified: trunk/Jmol/src/org/jmol/viewer

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2015-01-22 Thread hansonr
Revision: 20234 http://sourceforge.net/p/jmol/code/20234 Author: hansonr Date: 2015-01-22 23:21:48 + (Thu, 22 Jan 2015) Log Message: --- removing unwanted forcing of chain case Modified Paths: -- trunk/Jmol/src/org/jmol/viewer/Viewer.java Modified

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2015-01-22 Thread hansonr
Revision: 20235 http://sourceforge.net/p/jmol/code/20235 Author: hansonr Date: 2015-01-22 23:46:15 + (Thu, 22 Jan 2015) Log Message: --- simplification of TestSort into TextString Modified Paths: -- trunk/Jmol/src/org/jmol/g3d/Graphics3D.java trunk

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2015-01-22 Thread hansonr
Revision: 20236 http://sourceforge.net/p/jmol/code/20236 Author: hansonr Date: 2015-01-23 00:40:09 + (Fri, 23 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/g3d/Graphics3D.java Modified: trunk/Jmol/src/org/jmol/g3d

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2015-01-22 Thread hansonr
Revision: 20237 http://sourceforge.net/p/jmol/code/20237 Author: hansonr Date: 2015-01-23 01:53:29 + (Fri, 23 Jan 2015) Log Message: --- very important for JavaScript! Modified Paths: -- trunk/Jmol/src/org/jmol/g3d/LineRenderer.java trunk/Jmol/src

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2015-01-22 Thread hansonr
Revision: 20238 http://sourceforge.net/p/jmol/code/20238 Author: hansonr Date: 2015-01-23 02:36:11 + (Fri, 23 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/g3d/Graphics3D.java trunk/Jmol/src/org/jmol/g3d

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2015-01-22 Thread hansonr
Revision: 20240 http://sourceforge.net/p/jmol/code/20240 Author: hansonr Date: 2015-01-23 04:14:38 + (Fri, 23 Jan 2015) Log Message: --- Modified Paths: -- branches/v14_2/Jmol/test/org/jmol/adapter/smarter/TestSmarterJmolAdapter.java Modified

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2015-01-24 Thread hansonr
Revision: 20241 http://sourceforge.net/p/jmol/code/20241 Author: hansonr Date: 2015-01-24 23:03:41 + (Sat, 24 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.24" new feature: load NBO CH3CH2CH3 -- retrieves the stucture of propane (in this ca

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2015-01-26 Thread hansonr
Revision: 20243 http://sourceforge.net/p/jmol/code/20243 Author: hansonr Date: 2015-01-27 05:24:40 + (Tue, 27 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.26" new feature: CGO PostScript option bug fix: CGO LINE_LOOP not closi

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2015-01-27 Thread hansonr
Revision: 20244 http://sourceforge.net/p/jmol/code/20244 Author: hansonr Date: 2015-01-27 13:49:18 + (Tue, 27 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.26" new feature: frame [1 3 5 6] -- sets limited number of frames for animation

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2015-01-27 Thread hansonr
Revision: 20245 http://sourceforge.net/p/jmol/code/20245 Author: hansonr Date: 2015-01-27 14:10:09 + (Tue, 27 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.26" new feature: frame [1 3 5 6] -- sets limited number of frames for animation

[Jmol-commits] SF.net SVN: jmol:[20246] trunk/Jmol/src/org/jmol/viewer/Jmol.properties

2015-01-27 Thread hansonr
Revision: 20246 http://sourceforge.net/p/jmol/code/20246 Author: hansonr Date: 2015-01-27 14:17:53 + (Tue, 27 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.26" new feature: frame [1 3 5 6] -- sets limited number of frames for animation

[Jmol-commits] SF.net SVN: jmol:[20247] branches/v14_2/Jmol/src/org

2015-01-27 Thread hansonr
Revision: 20247 http://sourceforge.net/p/jmol/code/20247 Author: hansonr Date: 2015-01-27 14:21:02 + (Tue, 27 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.01.26" bug fix: @3 for "atomno=3" should not extend to models that are not

[Jmol-commits] SF.net SVN: jmol:[20248] trunk/Jmol

2015-01-27 Thread hansonr
Revision: 20248 http://sourceforge.net/p/jmol/code/20248 Author: hansonr Date: 2015-01-27 22:09:31 + (Tue, 27 Jan 2015) Log Message: --- atom cleanup; singleton group fix Modified Paths: -- trunk/Jmol/examples/basic/org/jmol/Export.java trunk/Jmol

[Jmol-commits] SF.net SVN: jmol:[20249] trunk/Jmol/src/org/jmol

2015-01-27 Thread hansonr
Revision: 20249 http://sourceforge.net/p/jmol/code/20249 Author: hansonr Date: 2015-01-27 23:56:55 + (Tue, 27 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.27" bug fix: select thisModel does not select all atoms in visible frame set new fe

[Jmol-commits] SF.net SVN: jmol:[20250] branches/v14_2/Jmol/src/org/jmol

2015-01-27 Thread hansonr
Revision: 20250 http://sourceforge.net/p/jmol/code/20250 Author: hansonr Date: 2015-01-28 00:19:08 + (Wed, 28 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.01.27" bug fix: CGO LINE_LOOP not closing bug fix: configuration 1 broken bug fi

[Jmol-commits] SF.net SVN: jmol:[20251] trunk/Jmol/src/org

2015-01-28 Thread hansonr
Revision: 20251 http://sourceforge.net/p/jmol/code/20251 Author: hansonr Date: 2015-01-28 16:16:02 + (Wed, 28 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.28" new feature: MUTATE command -- replaces one amino acid group with another -

[Jmol-commits] SF.net SVN: jmol:[20252] trunk/Jmol/src/org/jmol

2015-01-28 Thread hansonr
Revision: 20252 http://sourceforge.net/p/jmol/code/20252 Author: hansonr Date: 2015-01-28 17:04:11 + (Wed, 28 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.28" new feature: MUTATE command -- replaces one amino acid group with another -

[Jmol-commits] SF.net SVN: jmol:[20253] trunk/Jmol/src/org/jmol/viewer/Jmol.properties

2015-01-28 Thread hansonr
Revision: 20253 http://sourceforge.net/p/jmol/code/20253 Author: hansonr Date: 2015-01-28 17:05:36 + (Wed, 28 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.28" new feature: MUTATE command -- replaces one amino acid group with another -

[Jmol-commits] SF.net SVN: jmol:[20254] trunk/Jmol/src/org/jmol/viewer/Jmol.properties

2015-01-28 Thread hansonr
Revision: 20254 http://sourceforge.net/p/jmol/code/20254 Author: hansonr Date: 2015-01-28 17:09:26 + (Wed, 28 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/viewer/Jmol.properties Modified: trunk/Jmol/src/org/jmol/viewer

[Jmol-commits] SF.net SVN: jmol:[20255] branches/v14_2/Jmol/src/org/jmol/modelsetbio/ BioModel.java

2015-01-29 Thread hansonr
Revision: 20255 http://sourceforge.net/p/jmol/code/20255 Author: hansonr Date: 2015-01-29 15:45:19 + (Thu, 29 Jan 2015) Log Message: --- Modified Paths: -- branches/v14_2/Jmol/src/org/jmol/modelsetbio/BioModel.java Modified: branches/v14_2/Jmol/src

[Jmol-commits] SF.net SVN: jmol:[20258] trunk/Jmol/src/org/jmol

2015-01-30 Thread hansonr
Revision: 20258 http://sourceforge.net/p/jmol/code/20258 Author: hansonr Date: 2015-01-30 14:43:12 + (Fri, 30 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.30" new feature: MUTATE command -- operates only on last model present if multiple

[Jmol-commits] SF.net SVN: jmol:[20259] trunk/Jmol/src/org/jmol

2015-01-30 Thread hansonr
Revision: 20259 http://sourceforge.net/p/jmol/code/20259 Author: hansonr Date: 2015-01-30 14:45:43 + (Fri, 30 Jan 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.01.30" new feature: MUTATE command -- operates only on last model present if multiple

[Jmol-commits] SF.net SVN: jmol:[20260] trunk/Jmol/src/org/jmol/modelsetbio/BioModel.java

2015-01-30 Thread hansonr
Revision: 20260 http://sourceforge.net/p/jmol/code/20260 Author: hansonr Date: 2015-01-30 15:43:23 + (Fri, 30 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/modelsetbio/BioModel.java Modified: trunk/Jmol/src/org/jmol/modelsetbio

[Jmol-commits] SF.net SVN: jmol:[20261] trunk/Jmol/src/org/jmol

2015-01-30 Thread hansonr
Revision: 20261 http://sourceforge.net/p/jmol/code/20261 Author: hansonr Date: 2015-01-30 15:56:30 + (Fri, 30 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/modelset/JmolBioModel.java trunk/Jmol/src/org/jmol/modelsetbio

[Jmol-commits] SF.net SVN: jmol:[20262] trunk/Jmol/src/org/jmol/viewer/Jmol.properties

2015-01-30 Thread hansonr
Revision: 20262 http://sourceforge.net/p/jmol/code/20262 Author: hansonr Date: 2015-01-30 16:02:08 + (Fri, 30 Jan 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/viewer/Jmol.properties Modified: trunk/Jmol/src/org/jmol/viewer

[Jmol-commits] SF.net SVN: jmol:[20266] trunk/Jmol/src/org/jmol

2015-02-04 Thread hansonr
Revision: 20266 http://sourceforge.net/p/jmol/code/20266 Author: hansonr Date: 2015-02-04 12:47:46 + (Wed, 04 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.04" new feature: print data({*},"xyz") -- (lower case) writes only ato

[Jmol-commits] SF.net SVN: jmol:[20267] branches/v14_2/Jmol/src

2015-02-04 Thread hansonr
Revision: 20267 http://sourceforge.net/p/jmol/code/20267 Author: hansonr Date: 2015-02-04 12:52:20 + (Wed, 04 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.02.04" bug fix: show mouse fails in JavaScript -- we cannot test using PT

[Jmol-commits] SF.net SVN: jmol:[20268] branches/v14_2/Jmol/src/org/openscience/jmol/app/ images

2015-02-04 Thread hansonr
Revision: 20268 http://sourceforge.net/p/jmol/code/20268 Author: hansonr Date: 2015-02-04 13:00:06 + (Wed, 04 Feb 2015) Log Message: --- Modified Paths: -- branches/v14_2/Jmol/src/org/openscience/jmol/app/images/Jmol_splash.jpg branches/v14_2/Jmol

[Jmol-commits] SF.net SVN: jmol:[20269] trunk/Jmol/src/org/jmol

2015-02-06 Thread hansonr
Revision: 20269 http://sourceforge.net/p/jmol/code/20269 Author: hansonr Date: 2015-02-06 13:59:32 + (Fri, 06 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.06" bug fix: appending a model to a model with data can fail bug fix: 02.04 select co

[Jmol-commits] SF.net SVN: jmol:[20271] trunk/Jmol/src/org

2015-02-07 Thread hansonr
Revision: 20271 http://sourceforge.net/p/jmol/code/20271 Author: hansonr Date: 2015-02-08 03:21:49 + (Sun, 08 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.07" bug fix: zoomTo{xxx} 0 does not center (broken in 13.1.16_dev_2013.05.2

[Jmol-commits] SF.net SVN: jmol:[20272] branches/v14_2/Jmol/src/org/jmol

2015-02-07 Thread hansonr
Revision: 20272 http://sourceforge.net/p/jmol/code/20272 Author: hansonr Date: 2015-02-08 03:22:38 + (Sun, 08 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.02.07" bug fix: zoomTo{xxx} 0 does not center (broken in 13.1.16_dev_2013.05.2

[Jmol-commits] SF.net SVN: jmol:[20273] branches/v14_2/Jmol/src/org/jmol

2015-02-08 Thread hansonr
Revision: 20273 http://sourceforge.net/p/jmol/code/20273 Author: hansonr Date: 2015-02-08 18:37:51 + (Sun, 08 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.02.07" bug fix: set meshScale is not being applied to isosurface contours Modi

[Jmol-commits] SF.net SVN: jmol:[20274] trunk/Jmol/src/org/jmol

2015-02-08 Thread hansonr
Revision: 20274 http://sourceforge.net/p/jmol/code/20274 Author: hansonr Date: 2015-02-08 18:38:27 + (Sun, 08 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.07" bug fix: set meshScale is not being applied to isosurface contours Modi

[Jmol-commits] SF.net SVN: jmol:[20275] trunk/Jmol/src/org/jmol

2015-02-09 Thread hansonr
Revision: 20275 http://sourceforge.net/p/jmol/code/20275 Author: hansonr Date: 2015-02-09 13:10:40 + (Mon, 09 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.09" new feature: frame align {atoms} FIXED -- shifts atom positions in each fram

[Jmol-commits] SF.net SVN: jmol:[20276] trunk/Jmol/src/org/jmol

2015-02-10 Thread hansonr
Revision: 20276 http://sourceforge.net/p/jmol/code/20276 Author: hansonr Date: 2015-02-10 14:11:05 + (Tue, 10 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.10" bug fix: mmCIF reader does not flag first model of a multimodel set as a

[Jmol-commits] SF.net SVN: jmol:[20277] branches/v14_2/Jmol/src/org/jmol

2015-02-10 Thread hansonr
Revision: 20277 http://sourceforge.net/p/jmol/code/20277 Author: hansonr Date: 2015-02-10 14:11:22 + (Tue, 10 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.10" bug fix: mmCIF reader does not flag first model of a multimodel set as a

[Jmol-commits] SF.net SVN: jmol:[20279] branches/v14_2/Jmol/src/org/jmol

2015-02-10 Thread hansonr
Revision: 20279 http://sourceforge.net/p/jmol/code/20279 Author: hansonr Date: 2015-02-11 03:52:27 + (Wed, 11 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.02.10" bug fix: color $contact1 "roygb" range -0.5 1.0; broken (in state after

[Jmol-commits] SF.net SVN: jmol:[20278] trunk/Jmol/src/org/jmol

2015-02-10 Thread hansonr
Revision: 20278 http://sourceforge.net/p/jmol/code/20278 Author: hansonr Date: 2015-02-11 03:52:14 + (Wed, 11 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.02.10" bug fix: color $contact1 "roygb" range -0.5 1.0; broken (in state after

[Jmol-commits] SF.net SVN: jmol:[20280] branches/v14_2/Jmol/src/org/jmol

2015-02-11 Thread hansonr
Revision: 20280 http://sourceforge.net/p/jmol/code/20280 Author: hansonr Date: 2015-02-11 12:00:50 + (Wed, 11 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.02.11" released bug fix: 02.10 may break loading ligand files Modi

[Jmol-commits] SF.net SVN: jmol:[20281] trunk/Jmol/src/org/jmol

2015-02-11 Thread hansonr
Revision: 20281 http://sourceforge.net/p/jmol/code/20281 Author: hansonr Date: 2015-02-11 12:48:31 + (Wed, 11 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.11" bug fix: "USER MOD" not accepted at beginning of PDB file (MolProbity

[Jmol-commits] SF.net SVN: jmol:[20282] branches/v14_2/Jmol/src/org/jmol/viewer/Jmol. properties

2015-02-11 Thread hansonr
Revision: 20282 http://sourceforge.net/p/jmol/code/20282 Author: hansonr Date: 2015-02-11 12:49:30 + (Wed, 11 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.02.11" released bug fix: 02.10 may break loading ligand files Modi

[Jmol-commits] SF.net SVN: jmol:[20283] trunk/Jmol/src/org/jmol

2015-02-11 Thread hansonr
Revision: 20283 http://sourceforge.net/p/jmol/code/20283 Author: hansonr Date: 2015-02-11 22:03:44 + (Wed, 11 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.11" bug fix: MUTATE not properly saved in state bug fix: "USER MOD" not a

[Jmol-commits] SF.net SVN: jmol:[20284] trunk/Jmol/src/org/jmol

2015-02-11 Thread hansonr
Revision: 20284 http://sourceforge.net/p/jmol/code/20284 Author: hansonr Date: 2015-02-12 00:15:16 + (Thu, 12 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.11" bug fix: 14.3.12_2015.02.09 breaks MODEL "someTitle" syntax

[Jmol-commits] SF.net SVN: jmol:[20285] trunk/Jmol/build.xml

2015-02-11 Thread hansonr
Revision: 20285 http://sourceforge.net/p/jmol/code/20285 Author: hansonr Date: 2015-02-12 00:37:22 + (Thu, 12 Feb 2015) Log Message: --- switching back to GoDaddy timestamp Modified Paths: -- trunk/Jmol/build.xml Modified: trunk/Jmol/build.xml

[Jmol-commits] SF.net SVN: jmol:[20286] branches/v14_2/Jmol/build.xml

2015-02-11 Thread hansonr
Revision: 20286 http://sourceforge.net/p/jmol/code/20286 Author: hansonr Date: 2015-02-12 00:38:19 + (Thu, 12 Feb 2015) Log Message: --- switching back to GoDaddy timestamp Modified Paths: -- branches/v14_2/Jmol/build.xml Modified: branches/v14_2/Jmol

[Jmol-commits] SF.net SVN: jmol:[20287] trunk/Jmol/src/org/jmol/adapter/readers

2015-02-12 Thread hansonr
Revision: 20287 http://sourceforge.net/p/jmol/code/20287 Author: hansonr Date: 2015-02-12 12:46:39 + (Thu, 12 Feb 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/adapter/readers/pdb/PdbReader.java trunk/Jmol/src/org/jmol/adapter

[Jmol-commits] SF.net SVN: jmol:[20288] trunk/Jmol/src

2015-02-12 Thread hansonr
Revision: 20288 http://sourceforge.net/p/jmol/code/20288 Author: hansonr Date: 2015-02-12 12:48:51 + (Thu, 12 Feb 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/javajs/util/PT.java trunk/Jmol/src/org/jmol/viewer/Viewer.java Modified

[Jmol-commits] SF.net SVN: jmol:[20289] trunk/Jmol/src/org/jmol/viewer/Viewer.java

2015-02-12 Thread hansonr
Revision: 20289 http://sourceforge.net/p/jmol/code/20289 Author: hansonr Date: 2015-02-12 12:51:26 + (Thu, 12 Feb 2015) Log Message: --- Modified Paths: -- trunk/Jmol/src/org/jmol/viewer/Viewer.java Modified: trunk/Jmol/src/org/jmol/viewer/Viewer.java

[Jmol-commits] SF.net SVN: jmol:[20290] trunk/Jmol/src

2015-02-14 Thread hansonr
Revision: 20290 http://sourceforge.net/p/jmol/code/20290 Author: hansonr Date: 2015-02-14 19:42:33 + (Sat, 14 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.3.12_2015.02.14" bug fix: compare({atomA},{atomsB}) should return standard 4x4 matrix, not one i

[Jmol-commits] SF.net SVN: jmol:[20291] branches/v14_2/Jmol

2015-02-14 Thread hansonr
Revision: 20291 http://sourceforge.net/p/jmol/code/20291 Author: hansonr Date: 2015-02-14 19:44:27 + (Sat, 14 Feb 2015) Log Message: --- Jmol.___JmolVersion="14.2.12_2015.02.14" bug fix: compare({atomA},{atomsB}) should return standard 4x4 matrix, not one i

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