Re: [Jmol-developers] JSmol as network viewer

2014-10-08 Thread Rolf Huehne
On 10/07/2014 06:12 PM, Robert Hanson wrote: >> Q: Does JSmol allow that an atom is part of more than one residue or >> would this interfere with something? >> > > Certainly an atom can only be in one residue. Each atom has a "group" > property that points to its residue. > Sorry, I should have pos

Re: [Jmol-developers] JSmol as network viewer

2014-10-08 Thread Herráez Sánchez Ángel
Rolf, > Would it be possible without too much trouble and work to extend the > current "group" property by a "grouplist" property that would enable to > put an atom into multiple groupsand integrating this seamlessly into the > current group concept? To me, that sounds exactly like setting a new,

Re: [Jmol-developers] JSmol as network viewer

2014-10-08 Thread Rolf Huehne
On 10/08/2014 11:54 AM, Herráez Sánchez Ángel wrote: > Rolf, > >> Would it be possible without too much trouble and work to extend the >> current "group" property by a "grouplist" property that would enable to >> put an atom into multiple groupsand integrating this seamlessly into the >> current gr

Re: [Jmol-developers] JSmol as network viewer

2014-10-08 Thread Robert Hanson
Groups are at the core of Jmol for PDB files, which are among the largest (slowest to process). They are key to all processing, including rendering. The idea of going from a "one-group simple pointer" method to a "multi-group look-up table" for something that is not a core molecular property is not

Re: [Jmol-developers] JSmol as network viewer

2014-10-08 Thread Rolf Huehne
On 10/08/2014 02:11 PM, Robert Hanson wrote: > Groups are at the core of Jmol for PDB files, which are among the largest > (slowest to process). They are key to all processing, including rendering. > The idea of going from a "one-group simple pointer" method to a > "multi-group look-up table" for s