Re: [Jmol-users] Jmol-users Digest, getting data from Jmol

2008-08-26 Thread Dean Johnston
If you're using Firefox at all, I've found the Firebug plug-in ( http://getfirebug.com/) to be immensely useful. Whether your debugging Javascript or just want to look at the DOM, it works great for me. Just set a breakpoint right after your jmolGetPropertyAsArray() call and then find your array

Re: [Jmol-users] Jmol-users Digest, getting data from Jmol

2008-08-26 Thread Jeff Hansen
Thanks Paul. That is very helpful. I was able to use it to display the data in the array in a text area on the web page. Should prove useful for figuring out how to mine the data. *** Jeff Hansen Department of Chemistry and Biochemistry DePauw U

Re: [Jmol-users] Jmol-users Digest, getting data from Jmol

2008-08-26 Thread Paul Pillot
I use the following dump() script when I want a detailed content of an object/array in javascript : http://binnyva.blogspot.com/2005/10/dump-function-javascript- equivalent-of.html Paul Le 26 août 08 à 20:37, Jeff Hansen a écrit : I'm working with Spartan 04 .smol files. I could use Spartan

Re: [Jmol-users] Jmol-users Digest, getting data from Jmol

2008-08-26 Thread Jeff Hansen
I'm working with Spartan 04 .smol files. I could use Spartan 06 files if necessary. I'm making progress. I'm able to use jmolGetPropertyAsArray and pull a value out of that. I would like to show the contents of the entire array so I could see what is there and how it is organized, but I'

Re: [Jmol-users] Jmol-users Digest, getting data from Jmol

2008-08-26 Thread Robert Hanson
The properties supported do depend upon the file type. What file type are you working with? Generally you can check this by using getproperty auxiliaryinfo which is a general holder for all sorts of molecular info. Bob On Mon, Aug 25, 2008 at 7:50 AM, Jeff Hansen <[EMAIL PROTECTED]> wrote: >

Re: [Jmol-users] Jmol-users Digest, getting data from Jmol

2008-08-25 Thread Jeff Hansen
Bob, I've been looking through the documentation and trying to figure this out. I'm not having much success. I don't think I quite understand the syntax for doing this. I also don't understand what properties are available and where to find them and which file formats are supported. I