Re: [Jmol-users] MessageCallBack and View Set

2004-09-25 Thread Miguel
> .innerHTML should be blank. Please try flushing your cache and reloading > the page. I've added some additional alerts as well. > > http://www.stolaf.edu/people/hansonr/jmol/docs/examples/moveto.htm Hmmm ... no noticable difference in behavior ... still nada. When I click on saveAngle() I can

Re: [Jmol-users] MessageCallBack and View Set

2004-09-25 Thread Bob Hanson
then the liveconnect is broken on that platform. Miguel wrote: .innerHTML should be blank. Please try flushing your cache and reloading the page. I've added some additional alerts as well. http://www.stolaf.edu/people/hansonr/jmol/docs/examples/moveto.htm Hmmm ... no noticable difference in behav

Re: [Jmol-users] set monitor on|off|{size}

2004-09-25 Thread timothy driscoll
On 2004-09-22 (11:11) Miguel wrote: >Tim, > >I just checked in code that allows you to control the measure/monitor >rendering. (Tim, I will send you the code off-list) > thanks Miguel, I got it. btw, I have restored my CVS access so I can get Jmol-HEAD again. >set monitor on # turns on measurem

Re: [Jmol-users] color group?

2004-09-25 Thread timothy driscoll
On 2004-09-22 (22:41) Miguel wrote: >>no; it really is more of a rainbow. see attached gif for an >>example. > >Hmmm ... sure looks pretty ugly to me > well, it is a useful way to trace the path of the backbone from N to C visually. I can't comment on the colors themselves. ;-) >>>Q: Please c

Re: [Jmol-users] MessageCallBack and View Set

2004-09-25 Thread Miguel
> then the liveconnect is broken on that platform. Nope ... because everything else works. That is, JavaScript is able to successfully send scripts to the applet. This is a JavaScrip/Dynamic HTML issue. Miguel --- This SF.Net email is spo

Re: [Jmol-users] set monitor on|off|{size}

2004-09-25 Thread Miguel
tim wrote: > thanks Miguel, I got it. btw, I have restored my CVS access so I can > get Jmol-HEAD again. Good. >>Measurements are made for measuring things. Therefore, it is important >>to see the ends of the lines. Therefore, they are not drawn to the >>centers of the atoms. Rather, they are a

Re: [Jmol-users] MessageCallBack and View Set

2004-09-25 Thread Bob Hanson
Miguel, I found a Mac with OS.X and will look into this. Can you get any other page with message callback to work? e.g. does http://www.stolaf.edu/people/hansonr/jmol/docs/examples/callback.htm work? Do you get any messages starting with "jmol:" for any of my example pages appearing in the texta

Re: [Jmol-users] MessageCallBack and View Set

2004-09-25 Thread Bob Hanson
Miguel, I found a Mac with OS.X and will look into this. Can you get any other page with message callback to work? e.g. does http://www.stolaf.edu/people/hansonr/jmol/docs/examples/callback.htm work? Do you get any messages starting with "jmol:" for any of my example pages appearing in the texta

[Jmol-users] script documentation update

2004-09-25 Thread Bob Hanson
I've updated the documentation at http://www.stolaf.edu/people/hansonr/jmol/docs to encompass the changes Miguel has made in 10pre14b This includes: slab/depth moveto show axisangle "monitor" alias now "measure" not "measurement" "frame" alias added: "model" -- Robert M. Hanson, [EMAIL PROTECTED],

Re: [Jmol-users] MessageCallBack and View Set

2004-09-25 Thread Bob Hanson
My attempt to duplicate this on OS.X was unsuccessful. (On the laptop I had there was no live connect on any pages, mine or others.) Bob Miguel wrote: then the liveconnect is broken on that platform. Nope ... because everything else works. That is, JavaScript is able to successfully send scripts

Re: [Jmol-users] color group?

2004-09-25 Thread Miguel
>>>no; it really is more of a rainbow. see attached gif for an >>>example. >> >>Hmmm ... sure looks pretty ugly to me >> > well, it is a useful way to trace the path of the backbone from N to C > visually. I can't comment on the colors themselves. ;-) I found all the colors confusing. I assume

Re: [Jmol-users] color group?

2004-09-25 Thread Bob Hanson
give this a try: var m=255 var rc=xmax var gc=xmin+0.5*(xmax-xmin) var bc=xmin var rw=1.9*(xmax-xmin) var gw=0.7*(xmax-xmin) var bw=0.9*(xmax-xmin) var r=(m-Math.max(0,Math.floor(m*(1-Math.abs(x-rc)/rw var g=(m-Math.max(0,M