[julia-users] Re: re ERRoR `convert` has no method matching convert(::Type{Int64...}, ::Int64) in pmap in Julia 0.3.6

2015-03-26 Thread Jason Knight
Well I made it into a minimal test-case, but I still don't understand what's happening: Run_Boot_code.jl: parm = rand(10,10) M = { parm[i,:] for i in 1:2} # size(parm,1)} require(Boot_code.jl) pmap(myfun,M) Boot_code.jl: using Devectorize function myfun(pam) println(Entering myfun) foo =

Re: [julia-users] Need help to understand method dispatch with modules

2015-01-02 Thread Jason Knight
No worries! In thinking about it more, I don't think a 'right' solution is as simple as I first hoped (a design tradeoff is hiding just beneath the surface), but the pain points can hopefully be ameliorated. On Friday, January 2, 2015 5:29:27 PM UTC-6, Stefan Karpinski wrote: Jason, I've been

[julia-users] Re: Compose.jl Tutorials for working on Gadfly.jl

2014-11-24 Thread Jason Knight
For Venn diagrams there is https://github.com/HarlanH/VennEuler.jl And I started a project with a simpler API at https://github.com/binarybana/VennDiagrams.jl (currently a skeleton) which is related to the above by https://github.com/HarlanH/VennEuler.jl/issues/14 On Saturday, November 22,

[julia-users] Re: Pretty Printing of Results

2014-09-23 Thread Jason Knight
Donald, I would enjoy seeing your code once you release it. I'm doing research with Bayesian bioinformatics models using MCMC. You can place all your MCMC samples in a DataFrame and then call describe on it to get a very similar output to what you described. You can also write your own

[julia-users] Re: Reading sideways CSV file into a DataFrame

2014-09-03 Thread Jason Knight
I usually go straight to the source when looking for things in DataFrames as the documentation is missing quite a bit of functionality (push!, hcat, vcat, melt etc..) but in this case as Kevin mentioned: no dice. But you can always hack it: using DataFrames fname = datat.csv data =

[julia-users] Re: Does Julia have something similar to Python's documentation string?

2014-08-24 Thread Jason Knight
Happy reading: https://github.com/JuliaLang/julia/issues/3988 :) On Sunday, August 24, 2014 5:03:04 PM UTC-5, Job van der Zwan wrote: Any plans? Discussions on Github worth reading through? I personally am really charmed by the godoc http://blog.golang.org/godoc-documenting-go-code approach

[julia-users] Command Line Julia Helper

2014-08-15 Thread Jason Knight
I just ran across the very cool https://github.com/Russell91/pythonpy If someone has a free afternoon, then a Julia port would be cool (hint, hint, ;). As I've found myself in the past doing things like: cat numbers.csv | julia -E 'sum(map(int,readlines(STDIN)))' And a few more flags for

[julia-users] Re: Classification with Julia

2014-08-13 Thread Jason Knight
I'm currently working with Optimal Bayesian Classifiers with my not-really-ready-for-public-consumption package OBC.jl https://github.com/binarybana/obc.jl. It's currently quite specialized for bioinformatics (RNA-Seq) data, so probably not what you want, but I thought I'd throw it out there.

[julia-users] Re: Strange LLVM error

2014-08-01 Thread Jason Knight
So in short, I coded a model-fitting Markov chain to fit some parameters of a neural network to existing data. With few amounts of Markov chain iterations, the code works fine, but when I run for longer, the code dies before it completes my function of finding the parameters matching

[julia-users] Re: noob question println

2014-02-22 Thread Jason Knight
What version/platform are you running this on? I'm on Linux using Julia master and everything prints normally for me. On Saturday, February 22, 2014 8:21:18 AM UTC-6, Barry Andersen wrote: I am beginning with julia. Here is a fibonacci series in julia. code: a, b = 1, 1 for i in [1:6]