I was having this problem on two systems, one a Core i-7, the other a
Xeon. Both are X86-64, running the kernel that uname reports as
4.4.0-66-generic
The problem has not recurred since the changes, but that's only a few
days ago at the moment.
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It looks like I'm having the same problem with a clean install of
Xubuntu 16.04.1, and I'll be trying the clocksource tweak. If you don't
hear back, it got fixed.
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