Re: Examples of integration between Lyx, Sage computations, and PDFLateX
The attachments on this thread have been posted to the wiki (thanks Christian):
http://wiki.lyx.org/Layouts/Modules/#toc7
http://wiki.lyx.org/uploads/Modules/Sage
Note that if you customize the sage.module file, you can load the
changes immediately by entering "layout-reload" in the minibuffer.
As Murat has done: I hereby grant permission to license my
contributions to the sage module for LyX under the GNU General Public
License, version 2 or later.
- Thomas
On Sun, Apr 1, 2012 at 12:03 PM, Murat Yildizoglu wrote:
> Good idea, thanks a lot for the suggestion Xu. Here is my statement (I put
> the devel list as CC) :
>
> I hereby grant permission to license my contributions to the SAGE module for
> LyX under the GNU
> General Public Licence, version 2 or later.
>
> Murat Yildizoglu
>
>
> 2012/3/31 Xu Wang
>>
>> Dear Thomas
>>
>> Excellent news! Thank you for your continued work. I have not taken a fine
>> look at this yet, but I also use Ubuntu so it looks like it might be useful.
>>
>> I'm not sure but I think for your contributions to be used you have to
>> give permission explicitly. Look at this email:
>>
>> http://www.mail-archive.com/lyx-devel@lists.lyx.org/msg161963.html
>> You can send something like that to the development list, lyx-devel
>>
>> And it could be a good idea for Murat to do the same.
>>
>> I'm not sure though.
>>
>> In any case, thank you for your continued work. I am appreciative. Xu
>>
>>
>>
>> On Sat, Mar 31, 2012 at 3:08 AM, Thomas Coffee
>> wrote:
>>>
>>> Hi Murat and Xu,
>>>
>>> I found your thread in the archives and did some further work on the
>>> LyX-SageTeX module that Murat posted previously.
>>>
>>> I fixed a few things that did not work for me in the version described
>>> earlier, and expanded the module specification to provide some
>>> additional conveniences for including literate Sage code in LyX
>>> documents. There's still much room for development and customization.
>>>
>>> The attachments comprise a set of files and a shell script "setup.sh"
>>> that should largely automate the configuration process on GNU/Linux
>>> systems.
>>>
>>> *** Help needed:
>>>
>>> For other interested users, I'd like to upload this to
>>> http://wiki.lyx.org/Layouts/Modules, but I get browser errors for
>>> links anywhere under the upload path wiki.lyx.org/ipfm. The page
>>> http://wiki.lyx.org/Site/AboutUploading also tells me I will need
>>> someone to tell me the upload password. Can anyone assist?
>>>
>>> Thanks,
>>> Thomas
>>>
>>>
>>> > Hi Xu,
>>> >
>>> > Thank you for your appreciation. I cannot advance anymore without any
>>> > help
>>> > from Lyx gurus.
>>> > I think I have extracted all the information I can from the help docs.
>>> > If I
>>> > get any answer to my questions, I can construct a little bit smarter
>>> > module
>>> > but the one we have now is already usable. With some supplementary
>>> > tricks
>>> > from the sagetex documentation and through manual executions of the
>>> > latex-sage-latex chain, it is possible to make a lot of computations.
>>> >
>>> > I was also very agreeably surprised that this module can be used for
>>> > conversion to HTML from LyX, with figures and all.
>>> >
>>> > I attach to this message the module in its actual stage and some
>>> > instruction for making the conversion chain functional. I hope this
>>> > would
>>> > already help some of you.
>>> >
>>> > As soon as I have more information, I will try to complete the module
>>> > file.
>>> >
>>> > Best regards,
>>> >
>>> > Murat
>>> >
>>> > 2011/10/31 Xu Wang
>>> >
>>> > > Dear Murat,
>>> > >
>>> > > This is great! I have been waiting for something like this for a long
>>> > > time. I also like the Sweave-like philosophy of this. It's more
>>> > > transparent
>>> > > and reproducible.
>>> > >
>>> > > I am looking forward to the final release with much excitement.
>>> > >
>>> > > Thank you for your work!
>>> > >
>>> > > Best,
>>> > >
>>> > > Xu
>>> > >
>>> > >
>>> > > On Mon, Oct 31, 2011 at 12:54 PM, Murat Yildizoglu
>>> > > wrote:
>>> > >
>>> > >> Just another mail to correct a problem with the preceding Lyx file
>>> > >> (see
>>> > >> the new file attached, and the $ signs in ERT boxes, this is
>>> > >> connected with
>>> > >> the problem I describe below) and ask a question about insets again:
>>> > >>
>>> > >> What kind of Flex insets can be included in a math mode text? Is
>>> > >> this
>>> > >> possible at all? Especially in displayed equation where one would
>>> > >> like to
>>> > >> include results from SAge computations?
>>> > >> I cannot write the following in math mode in Lyx, putting the left
>>> > >> member
>>> > >> in a displayed equation and the right member in a sagecode inset
>>> > >> that would
>>> > >> be converted to the expression I give
>>> > >> (\sage{integral(x/(x^2+1),x,0,1))
>>> > >> \dfrac{\partial^{4}y}{\partial
>>> > >> x^{4}}=\sage{integral(x/(x^2+1),x,0,1)}
>>> > >>
>>> > >> I meet two problems:
>>> > >> 1/ I cannot insert a Flex:sagecomman
Re: Examples of integration between Lyx, Sage computations, and PDFLateX
Good idea, thanks a lot for the suggestion Xu. Here is my statement (I put
the devel list as CC) :
I hereby grant permission to license my contributions to the SAGE
module for LyX under the GNU
General Public Licence, version 2 or later.
Murat Yildizoglu
2012/3/31 Xu Wang
> Dear Thomas
>
> Excellent news! Thank you for your continued work. I have not taken a fine
> look at this yet, but I also use Ubuntu so it looks like it might be useful.
>
> I'm not sure but I think for your contributions to be used you have to
> give permission explicitly. Look at this email:
>
> http://www.mail-archive.com/lyx-devel@lists.lyx.org/msg161963.html
> You can send something like that to the development list, lyx-devel
>
> And it could be a good idea for Murat to do the same.
>
> I'm not sure though.
>
> In any case, thank you for your continued work. I am appreciative. Xu
>
>
>
> On Sat, Mar 31, 2012 at 3:08 AM, Thomas Coffee wrote:
>
>> Hi Murat and Xu,
>>
>> I found your thread in the archives and did some further work on the
>> LyX-SageTeX module that Murat posted previously.
>>
>> I fixed a few things that did not work for me in the version described
>> earlier, and expanded the module specification to provide some
>> additional conveniences for including literate Sage code in LyX
>> documents. There's still much room for development and customization.
>>
>> The attachments comprise a set of files and a shell script "setup.sh"
>> that should largely automate the configuration process on GNU/Linux
>> systems.
>>
>> *** Help needed:
>>
>> For other interested users, I'd like to upload this to
>> http://wiki.lyx.org/Layouts/Modules, but I get browser errors for
>> links anywhere under the upload path wiki.lyx.org/ipfm. The page
>> http://wiki.lyx.org/Site/AboutUploading also tells me I will need
>> someone to tell me the upload password. Can anyone assist?
>>
>> Thanks,
>> Thomas
>>
>>
>> > Hi Xu,
>> >
>> > Thank you for your appreciation. I cannot advance anymore without any
>> help
>> > from Lyx gurus.
>> > I think I have extracted all the information I can from the help docs.
>> If I
>> > get any answer to my questions, I can construct a little bit smarter
>> module
>> > but the one we have now is already usable. With some supplementary
>> tricks
>> > from the sagetex documentation and through manual executions of the
>> > latex-sage-latex chain, it is possible to make a lot of computations.
>> >
>> > I was also very agreeably surprised that this module can be used for
>> > conversion to HTML from LyX, with figures and all.
>> >
>> > I attach to this message the module in its actual stage and some
>> > instruction for making the conversion chain functional. I hope this
>> would
>> > already help some of you.
>> >
>> > As soon as I have more information, I will try to complete the module
>> file.
>> >
>> > Best regards,
>> >
>> > Murat
>> >
>> > 2011/10/31 Xu Wang
>> >
>> > > Dear Murat,
>> > >
>> > > This is great! I have been waiting for something like this for a long
>> > > time. I also like the Sweave-like philosophy of this. It's more
>> transparent
>> > > and reproducible.
>> > >
>> > > I am looking forward to the final release with much excitement.
>> > >
>> > > Thank you for your work!
>> > >
>> > > Best,
>> > >
>> > > Xu
>> > >
>> > >
>> > > On Mon, Oct 31, 2011 at 12:54 PM, Murat Yildizoglu > >wrote:
>> > >
>> > >> Just another mail to correct a problem with the preceding Lyx file
>> (see
>> > >> the new file attached, and the $ signs in ERT boxes, this is
>> connected with
>> > >> the problem I describe below) and ask a question about insets again:
>> > >>
>> > >> What kind of Flex insets can be included in a math mode text? Is this
>> > >> possible at all? Especially in displayed equation where one would
>> like to
>> > >> include results from SAge computations?
>> > >> I cannot write the following in math mode in Lyx, putting the left
>> member
>> > >> in a displayed equation and the right member in a sagecode inset
>> that would
>> > >> be converted to the expression I give
>> (\sage{integral(x/(x^2+1),x,0,1))
>> > >>\dfrac{\partial^{4}y}{\partial
>> > >> x^{4}}=\sage{integral(x/(x^2+1),x,0,1)}
>> > >>
>> > >> I meet two problems:
>> > >> 1/ I cannot insert a Flex:sagecommand inset in a displayed equation,
>> Lyx
>> > >> just goes to the next line before inserting it...
>> > >> 2/ I cannot type the sagetex instruction (*sage{} ) by hand, because
>> > >> "x^2" in the right member must not be interpreted by LyX, since
>> Sage will
>> > >> need it for its computation.
>> > >>
>> > >> I can of course type everything in an ERT, but this cannot be called
>> > >> "integration" can it? ;-)
>> > >>
>> > >> I have reread again the help document on layouts and insets, and I
>> have
>> > >> checked the files that come in the layout folder of LyX, but cannot
>> find
>> > >> any answer to my question.
>> > >>
>> > >> Sorry for bothering you again with my problems... I hope that Sage
>> > >> integratio
