Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Phillippe.

I have already replied directly to you on this (in error) but to keep 
the help within the list  I have repeated my answers here and added  
some information:


If I convert the SWeave Scrap environment to Lyx Code,  it  compiles (as 
a bit of text) to PDF as expected, no strange escape codes.


=
library (car)
cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003;X2004=2004;etc
@

So it seems to be definitely connected with the Sweave part of the process

The rest of my reply is below

Philippe Grosjean wrote:

1) Have you placed your code in an ERT (Tex code)?
No,  I have now got a twelve chunks of Sweave code in the document 
(which all work) and none are in ERT


2) Did you enclose it with the required tags for noweb (INSIDE de 
ERT), i.e.,


=
library (car)
cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003; 


etc
@
Yes,  the full code copied from Lyx is (its in the Scrap environment and 
I have added the +'s to make it fit the email):


=library(car)
cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003;X2004=2004; 

+X2005=2005;X2006=2006;X2007=2007;X2008=2008;X2009=2009;X2010=2010; 


+X2011=2011;X2012=2012')
@


3) Did you run Sweave on the Noweb version produced?
Not manually in any way, I have just compiled to PDF from Lyx as I have 
been doing successfully with all the other SWeave chunks, up until this 
one.


But I haven't called an R package before, or used the recode function.  
Which are functioning in R OK, as I try the code in R first before 
copying into Lyx.


Strangely of course, it is compiling OK and giving me a PDF. With the 
other chunks of code, if I made a mistake, it refused to compile and I 
got an Rcmd error.


Not sure if that gives any more of a clue.

Graham




Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith
I wonder if its worth mentioning I am using a Mac, as it seems to be 
character code issue and maybe its something peculiar to the Mac.


Graham




Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Anders Ekberg

On 12 jun 2009, at 08.59, Graham Smith wrote:

I wonder if its worth mentioning I am using a Mac, as it seems to be  
character code issue and maybe its something peculiar to the Mac.


Graham


You can always try to change the encoding, e.g. using TextWrangler and  
see if that changes anything.


/Anders



Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Anders

Anders Ekberg wrote:
You can always try to change the encoding, e.g. using TextWrangler and 
see if that changes anything.
I'm sorry to say I don't how to do this. Do you mean my little bit of 
code giving me problems or do you mean the entire Lyx file.


If its the former do I change the encoding and paste it back into Lyx. 
I'm afraid I am  over my threshold of understanding here.


However, if I type the commands into an Emacs buffer I get some strange 
syntax handling


cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002; etc

With  the X2001=2001  the   and the numbers are pink (including the 
X) and the = is black the ; is also pink and the ' is black


but in the

X2002=2002 this is reversed the  and the ; are still pink but so is 
the = sign. The X2002 and 2002 are now black, which is the pattern that 
persists for the rest of the code.



Graham






Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

I have now tried reversing the single quotes and double quotes as here:

cabbages$Year-recode(cabbages$Year,'X2001'='2001';'X2002'='2002';'X2003'='2003'; 
etc


This is now compiling verbatim (so no spurious slashes) when it appears 
in the PDF , but it is running off the edge of the page and not actually 
running in R.


My next command

=
head(cabbages, n=10)
@


is showing no recoding has taken place.

Graham


error in make

2009-06-12 Thread bb
I tried to install lyx 1.6.3 on Suse 11.1 32 bit. In applying make I get
the following error message (only the last lines of very many). Does
anyone have an idea how to proceed? 

regards bb 

.
make[4]: Entering directory `/home/bb/lyx/lyx-1.6.3/src'
/bin/sh ../libtool --tag=CXX   --mode=link g++  -O2   -o liblyxmathed.la
InsetMathAMSArray.lo InsetMathArray.lo InsetMathBig.lo
InsetMathBoldSymbol.lo InsetMathBox.lo InsetMathBrace.lo InsetMath.lo
InsetMathCases.lo InsetMathChar.lo InsetMathColor.lo CommandInset.lo
InsetMathComment.lo InsetMathDecoration.lo InsetMathDelim.lo
InsetMathDiff.lo InsetMathDots.lo InsetMathEnsureMath.lo InsetMathEnv.lo
InsetMathExFunc.lo InsetMathExInt.lo InsetMathFont.lo
InsetMathFontOld.lo InsetMathFrac.lo InsetMathGrid.lo InsetMathHull.lo
InsetMathKern.lo InsetMathLefteqn.lo InsetMathLim.lo MathMacro.lo
InsetMathMatrix.lo InsetMathNest.lo InsetMathNumber.lo
InsetMathOverset.lo InsetMathPar.lo InsetMathPhantom.lo InsetMathRef.lo
InsetMathRoot.lo InsetMathScript.lo InsetMathSize.lo InsetMathSpace.lo
InsetMathSpecialChar.lo InsetMathSplit.lo InsetMathSqrt.lo
InsetMathStackrel.lo InsetMathString.lo InsetMathSubstack.lo
InsetMathSymbol.lo InsetMathTabular.lo InsetMathUnderset.lo
InsetMathUnknown.lo InsetMathXArrow.lo InsetMathXYMatrix.lo MathAtom.lo
MathAutoCorrect.lo MathData.lo MathExtern.lo MathFactory.lo
MathMacroArgument.lo MacroTable.lo MathMacroTemplate.lo MathParser.lo
MathStream.lo MathSupport.lo TextPainter.lo   
libtool: link: `InsetMathNest.lo' is not a valid libtool object
make[4]: *** [liblyxmathed.la] Fehler 1
make[4]: Leaving directory `/home/bb/lyx/lyx-1.6.3/src'
make[3]: *** [all-recursive] Fehler 1
make[3]: Leaving directory `/home/bb/lyx/lyx-1.6.3/src'
make[2]: *** [all] Fehler 2
make[2]: Leaving directory `/home/bb/lyx/lyx-1.6.3/src'
make[1]: *** [all-recursive] Fehler 1
make[1]: Leaving directory `/home/bb/lyx/lyx-1.6.3'
make: *** [all] Fehler 2
b...@linux-8tal:~/lyx/lyx-1.6.3 



rpm install failes

2009-06-12 Thread bb
As the installation from source failed I tried to install rpm-packages:

Paket /tmp/lyx-1.6.2-openSuse_11_1-1.i586-3.rpm kann nicht installiert
werden.

Details:
Subprocess failed. Error: RPM fehlgeschlagen: error: Failed
dependencies:
libAiksaurus-1.2.so.0 is needed by lyx-1.6.2-1.i586

After installing that package a new trial gives the Message:
Paket /tmp/lyx-1.6.2-openSuse_11_1-1.i586-7.rpm kann nicht installiert
werden.

Details:
Subprocess failed. Error: RPM fehlgeschlagen: /var/tmp/rpm-tmp.88270:
line 2: texhash: command not found
error: %post(lyx-1.6.2-1.i586) scriptlet failed, exit status 127

Whe trying to install lyx-1.6.2

Paket /tmp/lyx-1.6.2-openSuse_11_1-1.i586-10.rpm kann nicht installiert
werden.

Details:
Subprocess failed. Error: RPM fehlgeschlagen:   package lyx-1.6.2-1.i586
is already installed

I think there is something wrong with the rpm-packages. 

At least I was able to install lyx-1.6.0 on suse 11.1

Regards BB





Re: rpm install failes

2009-06-12 Thread Jürgen Spitzmüller
bb wrote:
 As the installation from source failed I tried to install rpm-packages:

Try this one:
http://software.opensuse.org/ymp/KDE:Backports/openSUSE_11.1/lyx.ymp

(this is the official openSuse RPM for LyX 1.6.3).

HTH,
Jürgen


Need Verdana font for the PDF generated from Lyx

2009-06-12 Thread Parul Bali
Hi everyone,

Could you please suggest any good packages that might be available if I want
Verdana font for the PDF that's generated from Lyx, instead of the standard
options available in Lyx.

Thank you.

Parul


installation failed again

2009-06-12 Thread bb
I tried to install from
software.opensuse.org/ymp/KDE:Backports/openSUSE_11.1/lyx.ymp
Negativ! 
Installation of package ./i586/lyx-1.6.3-2.1.i586.rpm failed.
Details:
Subprocess failed. Error: RPM fehlgeschlagen: error: unpacking of
archive failed on file /usr/share/texmf/tex/latex/lyx: cpio: rename
failed - Is a directory

Regards BB




Re: installation failed again

2009-06-12 Thread Jürgen Spitzmüller
bb wrote:
 Subprocess failed. Error: RPM fehlgeschlagen: error: unpacking of
 archive failed on file /usr/share/texmf/tex/latex/lyx: cpio: rename
 failed - Is a directory

rename the directory
/usr/share/texmf/tex/latex/lyx
to
/usr/share/texmf/tex/latex/lyx-old
and try again.

Jürgen



Help Needed in LYX

2009-06-12 Thread esrone noel
Good day,
I have been using lyx 1.5 version to type up my journals for the past few 
months. However I have asked someone to assist me in typing and I told them to 
download lyx from the internet. Unknowing to me, that there were different 
versions available on the internet, the person downloaded  
LyX-1.6.3-1-Installer.exe
When they were finished downloading and typing up the document I gave them they 
sent it to me. I was unable to open the document using lyx 1.5.  
What I need help with is the following:
Can I do something to make the newer version of lyx to work with lyx 1.5. Right 
now when I try opening the file it is saying ''cannot convert etc etc''

Regards,
Esrone.


  

SV: Need Verdana font for the PDF generated from Lyx

2009-06-12 Thread Ingar Pareliussen
I guess this package is your best bet. 

http://dante.ctan.org/CTAN/fonts/winfonts/

Read the README and the winfonts-doc.pdf for more information.

Ingar


SV: Help Needed in LYX

2009-06-12 Thread Ingar Pareliussen
You need to get the 1.6 version and use the file-export-Lyx 1.5.

I hope this helps.

Ingar


Elyxer and Lyx 1.6.3

2009-06-12 Thread Murat Yildizoglu
Hi,
I am trying elyxer under the last version of Lyx (1.6.3) . I have followed
the instructions in the list given by Olivier:


I managed to get elyxer working by doing the following:

- copy elyxer.py to the script folder (C:\Program Files\LyX
1.6.3\Resources\scripts)
on my machine,- in Preferences - Converters, in the LyX - HTML, modify the
command to be:


python $$s/scripts/elyxer.py $$i $$o


I have installed the last version (0.29) of the elyxer.py script in the
folder indicated by Olivier and changed Lyx-HTML conversion command as
indicated.
I have done a reconfigure, just incase.

But, when I do View/HTML or Export/HTML Lyx continues to try to run htlatex.
I am probably missing something but I do not know what :-(

Sorry if I am making a stupid mistake but I would appreciate a lot your help
at this point, since I am just blocked...

Regards,

Murat
-- 
Prof. Murat Yildizoglu
Université Paul Cézanne (Aix-Marseille 3)
GREQAM (UMR CNRS 6579)
Centre de la Vieille Charité
2, rue de la Charité
13236 Marseille cedex 02

Bureau 320
Tel : +33 4 91 14 07 27 (standard)
Tel : +33 4 91 14 07 70 (secrétariat)
Tel : +33 4 91 14 07 47 (bureau)
Fax : +33 4 91 90 02 27

e-mail: murat.yildizo...@univ-cezanne.fr
www : http://www.vcharite.univ-mrs.fr/PP/yildi/index.html
http://www.twitter.com/yildizoglu
__


Re: Help Needed in LYX

2009-06-12 Thread Olivier Ripoll

esrone noel wrote:

Good day,
I have been using lyx 1.5 version to type up my journals for the past few 
months. However I have asked someone to assist me in typing and I told them to 
download lyx from the internet. Unknowing to me, that there were different 
versions available on the internet, the person downloaded  
LyX-1.6.3-1-Installer.exe
When they were finished downloading and typing up the document I gave them they sent it to me. I was unable to open the document using lyx 1.5.  
What I need help with is the following:

Can I do something to make the newer version of lyx to work with lyx 1.5. Right 
now when I try opening the file it is saying ''cannot convert etc etc''

Regards,
Esrone.


Hi,

IIRC, 1.5.7 can open LyX 1.6 fileformat. If you do not want to upgrade 
to 1.6, perhaps you should at least upgrade to 1.5.7.


Best regards,

Olivier



how to skip to next page

2009-06-12 Thread Jason Lillywhite
I have not searched for this answer very well online because I'm not
sure exactly how to ask it in a few words. My problem is simple: I
have a cover page with title and abstract and I want to skip to the
next page to start my Introduction. How do you skip to the next page?
This would be the equivelent of doing Ctrl-Enter in MS-Word.

Thank you!


Re: how to skip to next page

2009-06-12 Thread James C. Sutherland


On Jun 12, 2009, at 8:58 AM, Jason Lillywhite wrote:


I have not searched for this answer very well online because I'm not
sure exactly how to ask it in a few words. My problem is simple: I
have a cover page with title and abstract and I want to skip to the
next page to start my Introduction. How do you skip to the next page?
This would be the equivelent of doing Ctrl-Enter in MS-Word.


Insert - Formatting - New Page


Re: how to skip to next page

2009-06-12 Thread Vincent van Ravesteijn

Jason Lillywhite schreef:

I have not searched for this answer very well online because I'm not
sure exactly how to ask it in a few words. My problem is simple: I
have a cover page with title and abstract and I want to skip to the
next page to start my Introduction. How do you skip to the next page?
This would be the equivelent of doing Ctrl-Enter in MS-Word.

Thank you!
  

Insert-Formatting- (New Page, Page Break, Clear Page, Clear Double Page)

Vincent


Problems with LyX 1.6.3

2009-06-12 Thread Reuven Segev
Hi,
I downloaded and installed version 1.6.3 (classic rather the alternative
installer) on WinXP64 system (over my previous 1.6.2 version). When I opened
documents, it would not compile them. It generated an empty tex file and issued
an error message about exporting buffer (don't have the exact wording). I tried
to reinstall. Same result. Reinstalled 1.6.2 and it works fine/

Did anybody have a similar experience? Ideas on how to solve the problem?

Thanks,
Reuven



Re: Need Verdana font for the PDF generated from Lyx

2009-06-12 Thread John Culleton
On Friday 12 June 2009 10:31:51 am Parul Bali wrote:
 Hi everyone,

 Could you please suggest any good packages that might be
 available if I want Verdana font for the PDF that's generated
 from Lyx, instead of the standard options available in Lyx.

 Thank you.

 Parul

Verdana is Microsoft's name for Helvetica.  Try Helvetica instead. 

-- 
John Culleton
Create Book Covers with Scribus/e-book $5.95
http://www.booklocker.com/books/4055.html


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Anders Ekberg

On 12 jun 2009, at 11.06, Graham Smith wrote:


Anders

Anders Ekberg wrote:
You can always try to change the encoding, e.g. using TextWrangler  
and see if that changes anything.
I'm sorry to say I don't how to do this. Do you mean my little bit  
of code giving me problems or do you mean the entire Lyx file.


If its the former do I change the encoding and paste it back into  
Lyx. I'm afraid I am  over my threshold of understanding here.


Yes, that was the quick-and-dirty idea. Open in TextWrangler, use save  
as... and click option to specify the encoding you want (there are  
probably much fancier ways of doing it).


However, if I type the commands into an Emacs buffer I get some  
strange syntax handling


cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002; etc

With  the X2001=2001  the   and the numbers are pink (including  
the X) and the = is black the ; is also pink and the ' is black


but in the

X2002=2002 this is reversed the  and the ; are still pink but  
so is the = sign. The X2002 and 2002 are now black, which is the  
pattern that persists for the rest of the code.


This is defenitely far over my (very low) threshold of understanding ;-)

/Anders


Re: Problems with LyX 1.6.3

2009-06-12 Thread Uwe Stöhr

Reuven Segev schrieb:


I downloaded and installed version 1.6.3 (classic rather the alternative
installer) on WinXP64 system (over my previous 1.6.2 version)...


Installing one version over another is in general problematic on Windows (not only for LyX). But 
when you uninstall LyX 1.6.2 and then install 1.6.3 it should work.


regards Uwe


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Anders,

Thanks again.

I have now been sent some trial code that works with Lyx/SWeave/R on 
Linux, but it is doing nothing on my Mac (with a fresh file). So I 
suspect there may be a real issue here rather than it me.



The strange syntax thing seems to have gone away now, so not sure what 
was going on there.


I think I am stuck now :-(

Graham



Anders Ekberg wrote:

On 12 jun 2009, at 11.06, Graham Smith wrote:


Anders

Anders Ekberg wrote:
You can always try to change the encoding, e.g. using TextWrangler 
and see if that changes anything.
I'm sorry to say I don't how to do this. Do you mean my little bit of 
code giving me problems or do you mean the entire Lyx file.


If its the former do I change the encoding and paste it back into 
Lyx. I'm afraid I am  over my threshold of understanding here.


Yes, that was the quick-and-dirty idea. Open in TextWrangler, use save 
as... and click option to specify the encoding you want (there are 
probably much fancier ways of doing it).


However, if I type the commands into an Emacs buffer I get some 
strange syntax handling


cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002; etc

With  the X2001=2001  the   and the numbers are pink (including 
the X) and the = is black the ; is also pink and the ' is black


but in the

X2002=2002 this is reversed the  and the ; are still pink but so 
is the = sign. The X2002 and 2002 are now black, which is the pattern 
that persists for the rest of the code.


This is defenitely far over my (very low) threshold of understanding ;-)

/Anders


--
Graham M Smith
graham.sm...@myotis.co.uk

Station Cottage, Station Road
Binegar, Somerset
BA3 4UQ




Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

With help from Anders and Jay, part of this problem seems to be solved.

Some sample code from Jay, refused to run until the document settings 
were changed to use utf8 encoding.


This worked for the sample code, but didn't help with my code.

However, I notice that with my code in the latex code window, the code 
is highlighted between the $ signs at the start of the code


cabbages$Year-recode(cabbages$Year,'.

I wonder if this suggests that the $ sign is being interpreted in some 
odd way.


Graham

Graham Smith wrote:

I've started using Sweave and having a problem

The code in Lyx is

library (car)

cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003; 
etc


But its appearing in the PDF as


 cabbages$Year - recode(cabbages$Year, 
\X2001\=\2001\;\X2002\=\2002\;\X2003\=\2003\;\ etc


And obviously isn't working as printing out incorrectly.

Can anyone suggest what is happening here.

Many thanks,

Graham



--
Graham M Smith
graham.sm...@myotis.co.uk

Station Cottage, Station Road
Binegar, Somerset
BA3 4UQ




LyX crashes upon referencing images

2009-06-12 Thread Jason Lillywhite
I am running LyX in Ubuntu 9.04 and I'm working on a document that
contains many figures and tables. LyX has crashed multiple times when
working with these figures I'm inserting.

I'm inserting figures by doing a float, then insert graphic. I found
that when I try to adjust the output size and/or LyX display size at
the time of first importing the image, it tends to crash the program.
I do not have a problem if I insert the graphic, close the dialogue
box, then edit the image settings after. I'm inserting bmp images. I'm
using an article Document Class.


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Well this is a bit embarrassing , it seems I had two problems, one
was that the recode command seems to need utf8 coding rather than the
Lyx default (which is fine), plus I had typing error in the data set,
which is not fine :-(

I rewrote my code using the with command which allowed it to run, but
it then became obvious that the recoded results were not what I had
expected. The typing error then being obvious.

The first entry in my code was 'X2001'='2001' but the first level in
the data set was X20001 and this was enough to cause recode to fail
in my original code, but run using the with command.

Its now working. BUT the code still runs off the edge of the page and 
doesn't wrap with a continuation symbol. Anyone have any suggestions for 
fixing this one?


Thanks to everyone for there help.

Graham Smith wrote:

I've started using Sweave and having a problem

The code in Lyx is

library (car)

cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003; 
etc


But its appearing in the PDF as


 cabbages$Year - recode(cabbages$Year, 
\X2001\=\2001\;\X2002\=\2002\;\X2003\=\2003\;\ etc


And obviously isn't working as printing out incorrectly.

Can anyone suggest what is happening here.

Many thanks,

Graham



--
Graham M Smith
graham.sm...@myotis.co.uk

Station Cottage, Station Road
Binegar, Somerset
BA3 4UQ




Re: Problems with LyX 1.6.3

2009-06-12 Thread Uwe Stöhr

Reuven Segev schrieb:

Thanks a lot for your reply and help. I have a question though: If I 
uninstall 1.6.2, would it keep my preferences, e.g., user interface, 
keyboard shortcuts, file handling preferences, etc.?


I cannot speak for the standard installer, but as this is possible with my alternative installer, I 
guess that also the standard installer supports this. (There is an option in the uninstaller to keep 
your preferences.)


regards Uwe


Re: LyX crashes upon referencing images

2009-06-12 Thread Vincent van Ravesteijn

Jason Lillywhite schreef:

I am running LyX in Ubuntu 9.04 and I'm working on a document that
contains many figures and tables. LyX has crashed multiple times when
working with these figures I'm inserting.

I'm inserting figures by doing a float, then insert graphic. I found
that when I try to adjust the output size and/or LyX display size at
the time of first importing the image, it tends to crash the program.
I do not have a problem if I insert the graphic, close the dialogue
box, then edit the image settings after. I'm inserting bmp images. I'm
using an article Document Class.
  

Please try to upgrade your qt from 4.5.0 to 4.5.1 (if you didn't do so yet).

Vincent


Re: LyX crashes upon referencing images

2009-06-12 Thread Richard Heck

Vincent van Ravesteijn wrote:

Jason Lillywhite schreef:

I am running LyX in Ubuntu 9.04 and I'm working on a document that
contains many figures and tables. LyX has crashed multiple times when
working with these figures I'm inserting.

I'm inserting figures by doing a float, then insert graphic. I found
that when I try to adjust the output size and/or LyX display size at
the time of first importing the image, it tends to crash the program.
I do not have a problem if I insert the graphic, close the dialogue
box, then edit the image settings after. I'm inserting bmp images. I'm
using an article Document Class.
  
Please try to upgrade your qt from 4.5.0 to 4.5.1 (if you didn't do so 
yet).


And if that doesn't work, see if you can't get a perfect recipe for 
reproducing the crash. Then we can fix it. Otherwise, we are fishing.


rh



Re: Elyxer and Lyx 1.6.3

2009-06-12 Thread Alex Fernandez
Hi Murat,

On Fri, Jun 12, 2009 at 4:56 PM, Murat
Yildizoglumurat.yildizo...@univ-cezanne.fr wrote:
 I am trying elyxer under the last version of Lyx (1.6.3) . I have followed
 the instructions in the list given by Olivier:

Wasn't LyX 1.6.3 supposed to support eLyXer out of the box? I haven't
downloaded it to try, but I was under that impression. Well, maybe
not.

 But, when I do View/HTML or Export/HTML Lyx continues to try to run htlatex.
 I am probably missing something but I do not know what :-(

I am sorry I can't help you. Surely someone else on the list can help
you. Meanwhile you can try manual conversion on a DOS terminal,
writing:
   Python.exe route_to_elyxer\elyxer.py filein.lyx fileout.html

Let us hope that LyX 1.6.4 comes already preconfigured to use eLyXer
and that the Windows installer optionally installs it. It would solve
a lot of problems for users.

Thanks,

Alex.


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Phillippe.

I have already replied directly to you on this (in error) but to keep 
the help within the list  I have repeated my answers here and added  
some information:


If I convert the SWeave Scrap environment to Lyx Code,  it  compiles (as 
a bit of text) to PDF as expected, no strange escape codes.


=
library (car)
cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003;X2004=2004;etc
@

So it seems to be definitely connected with the Sweave part of the process

The rest of my reply is below

Philippe Grosjean wrote:

1) Have you placed your code in an ERT (Tex code)?
No,  I have now got a twelve chunks of Sweave code in the document 
(which all work) and none are in ERT


2) Did you enclose it with the required tags for noweb (INSIDE de 
ERT), i.e.,


=
library (car)
cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003; 


etc
@
Yes,  the full code copied from Lyx is (its in the Scrap environment and 
I have added the +'s to make it fit the email):


=library(car)
cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003;X2004=2004; 

+X2005=2005;X2006=2006;X2007=2007;X2008=2008;X2009=2009;X2010=2010; 


+X2011=2011;X2012=2012')
@


3) Did you run Sweave on the Noweb version produced?
Not manually in any way, I have just compiled to PDF from Lyx as I have 
been doing successfully with all the other SWeave chunks, up until this 
one.


But I haven't called an R package before, or used the recode function.  
Which are functioning in R OK, as I try the code in R first before 
copying into Lyx.


Strangely of course, it is compiling OK and giving me a PDF. With the 
other chunks of code, if I made a mistake, it refused to compile and I 
got an Rcmd error.


Not sure if that gives any more of a clue.

Graham




Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith
I wonder if its worth mentioning I am using a Mac, as it seems to be 
character code issue and maybe its something peculiar to the Mac.


Graham




Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Anders Ekberg

On 12 jun 2009, at 08.59, Graham Smith wrote:

I wonder if its worth mentioning I am using a Mac, as it seems to be  
character code issue and maybe its something peculiar to the Mac.


Graham


You can always try to change the encoding, e.g. using TextWrangler and  
see if that changes anything.


/Anders



Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Anders

Anders Ekberg wrote:
You can always try to change the encoding, e.g. using TextWrangler and 
see if that changes anything.
I'm sorry to say I don't how to do this. Do you mean my little bit of 
code giving me problems or do you mean the entire Lyx file.


If its the former do I change the encoding and paste it back into Lyx. 
I'm afraid I am  over my threshold of understanding here.


However, if I type the commands into an Emacs buffer I get some strange 
syntax handling


cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002; etc

With  the X2001=2001  the   and the numbers are pink (including the 
X) and the = is black the ; is also pink and the ' is black


but in the

X2002=2002 this is reversed the  and the ; are still pink but so is 
the = sign. The X2002 and 2002 are now black, which is the pattern that 
persists for the rest of the code.



Graham






Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

I have now tried reversing the single quotes and double quotes as here:

cabbages$Year-recode(cabbages$Year,'X2001'='2001';'X2002'='2002';'X2003'='2003'; 
etc


This is now compiling verbatim (so no spurious slashes) when it appears 
in the PDF , but it is running off the edge of the page and not actually 
running in R.


My next command

=
head(cabbages, n=10)
@


is showing no recoding has taken place.

Graham


error in make

2009-06-12 Thread bb
I tried to install lyx 1.6.3 on Suse 11.1 32 bit. In applying make I get
the following error message (only the last lines of very many). Does
anyone have an idea how to proceed? 

regards bb 

.
make[4]: Entering directory `/home/bb/lyx/lyx-1.6.3/src'
/bin/sh ../libtool --tag=CXX   --mode=link g++  -O2   -o liblyxmathed.la
InsetMathAMSArray.lo InsetMathArray.lo InsetMathBig.lo
InsetMathBoldSymbol.lo InsetMathBox.lo InsetMathBrace.lo InsetMath.lo
InsetMathCases.lo InsetMathChar.lo InsetMathColor.lo CommandInset.lo
InsetMathComment.lo InsetMathDecoration.lo InsetMathDelim.lo
InsetMathDiff.lo InsetMathDots.lo InsetMathEnsureMath.lo InsetMathEnv.lo
InsetMathExFunc.lo InsetMathExInt.lo InsetMathFont.lo
InsetMathFontOld.lo InsetMathFrac.lo InsetMathGrid.lo InsetMathHull.lo
InsetMathKern.lo InsetMathLefteqn.lo InsetMathLim.lo MathMacro.lo
InsetMathMatrix.lo InsetMathNest.lo InsetMathNumber.lo
InsetMathOverset.lo InsetMathPar.lo InsetMathPhantom.lo InsetMathRef.lo
InsetMathRoot.lo InsetMathScript.lo InsetMathSize.lo InsetMathSpace.lo
InsetMathSpecialChar.lo InsetMathSplit.lo InsetMathSqrt.lo
InsetMathStackrel.lo InsetMathString.lo InsetMathSubstack.lo
InsetMathSymbol.lo InsetMathTabular.lo InsetMathUnderset.lo
InsetMathUnknown.lo InsetMathXArrow.lo InsetMathXYMatrix.lo MathAtom.lo
MathAutoCorrect.lo MathData.lo MathExtern.lo MathFactory.lo
MathMacroArgument.lo MacroTable.lo MathMacroTemplate.lo MathParser.lo
MathStream.lo MathSupport.lo TextPainter.lo   
libtool: link: `InsetMathNest.lo' is not a valid libtool object
make[4]: *** [liblyxmathed.la] Fehler 1
make[4]: Leaving directory `/home/bb/lyx/lyx-1.6.3/src'
make[3]: *** [all-recursive] Fehler 1
make[3]: Leaving directory `/home/bb/lyx/lyx-1.6.3/src'
make[2]: *** [all] Fehler 2
make[2]: Leaving directory `/home/bb/lyx/lyx-1.6.3/src'
make[1]: *** [all-recursive] Fehler 1
make[1]: Leaving directory `/home/bb/lyx/lyx-1.6.3'
make: *** [all] Fehler 2
b...@linux-8tal:~/lyx/lyx-1.6.3 



rpm install failes

2009-06-12 Thread bb
As the installation from source failed I tried to install rpm-packages:

Paket /tmp/lyx-1.6.2-openSuse_11_1-1.i586-3.rpm kann nicht installiert
werden.

Details:
Subprocess failed. Error: RPM fehlgeschlagen: error: Failed
dependencies:
libAiksaurus-1.2.so.0 is needed by lyx-1.6.2-1.i586

After installing that package a new trial gives the Message:
Paket /tmp/lyx-1.6.2-openSuse_11_1-1.i586-7.rpm kann nicht installiert
werden.

Details:
Subprocess failed. Error: RPM fehlgeschlagen: /var/tmp/rpm-tmp.88270:
line 2: texhash: command not found
error: %post(lyx-1.6.2-1.i586) scriptlet failed, exit status 127

Whe trying to install lyx-1.6.2

Paket /tmp/lyx-1.6.2-openSuse_11_1-1.i586-10.rpm kann nicht installiert
werden.

Details:
Subprocess failed. Error: RPM fehlgeschlagen:   package lyx-1.6.2-1.i586
is already installed

I think there is something wrong with the rpm-packages. 

At least I was able to install lyx-1.6.0 on suse 11.1

Regards BB





Re: rpm install failes

2009-06-12 Thread Jürgen Spitzmüller
bb wrote:
 As the installation from source failed I tried to install rpm-packages:

Try this one:
http://software.opensuse.org/ymp/KDE:Backports/openSUSE_11.1/lyx.ymp

(this is the official openSuse RPM for LyX 1.6.3).

HTH,
Jürgen


Need Verdana font for the PDF generated from Lyx

2009-06-12 Thread Parul Bali
Hi everyone,

Could you please suggest any good packages that might be available if I want
Verdana font for the PDF that's generated from Lyx, instead of the standard
options available in Lyx.

Thank you.

Parul


installation failed again

2009-06-12 Thread bb
I tried to install from
software.opensuse.org/ymp/KDE:Backports/openSUSE_11.1/lyx.ymp
Negativ! 
Installation of package ./i586/lyx-1.6.3-2.1.i586.rpm failed.
Details:
Subprocess failed. Error: RPM fehlgeschlagen: error: unpacking of
archive failed on file /usr/share/texmf/tex/latex/lyx: cpio: rename
failed - Is a directory

Regards BB




Re: installation failed again

2009-06-12 Thread Jürgen Spitzmüller
bb wrote:
 Subprocess failed. Error: RPM fehlgeschlagen: error: unpacking of
 archive failed on file /usr/share/texmf/tex/latex/lyx: cpio: rename
 failed - Is a directory

rename the directory
/usr/share/texmf/tex/latex/lyx
to
/usr/share/texmf/tex/latex/lyx-old
and try again.

Jürgen



Help Needed in LYX

2009-06-12 Thread esrone noel
Good day,
I have been using lyx 1.5 version to type up my journals for the past few 
months. However I have asked someone to assist me in typing and I told them to 
download lyx from the internet. Unknowing to me, that there were different 
versions available on the internet, the person downloaded  
LyX-1.6.3-1-Installer.exe
When they were finished downloading and typing up the document I gave them they 
sent it to me. I was unable to open the document using lyx 1.5.  
What I need help with is the following:
Can I do something to make the newer version of lyx to work with lyx 1.5. Right 
now when I try opening the file it is saying ''cannot convert etc etc''

Regards,
Esrone.


  

SV: Need Verdana font for the PDF generated from Lyx

2009-06-12 Thread Ingar Pareliussen
I guess this package is your best bet. 

http://dante.ctan.org/CTAN/fonts/winfonts/

Read the README and the winfonts-doc.pdf for more information.

Ingar


SV: Help Needed in LYX

2009-06-12 Thread Ingar Pareliussen
You need to get the 1.6 version and use the file-export-Lyx 1.5.

I hope this helps.

Ingar


Elyxer and Lyx 1.6.3

2009-06-12 Thread Murat Yildizoglu
Hi,
I am trying elyxer under the last version of Lyx (1.6.3) . I have followed
the instructions in the list given by Olivier:


I managed to get elyxer working by doing the following:

- copy elyxer.py to the script folder (C:\Program Files\LyX
1.6.3\Resources\scripts)
on my machine,- in Preferences - Converters, in the LyX - HTML, modify the
command to be:


python $$s/scripts/elyxer.py $$i $$o


I have installed the last version (0.29) of the elyxer.py script in the
folder indicated by Olivier and changed Lyx-HTML conversion command as
indicated.
I have done a reconfigure, just incase.

But, when I do View/HTML or Export/HTML Lyx continues to try to run htlatex.
I am probably missing something but I do not know what :-(

Sorry if I am making a stupid mistake but I would appreciate a lot your help
at this point, since I am just blocked...

Regards,

Murat
-- 
Prof. Murat Yildizoglu
Université Paul Cézanne (Aix-Marseille 3)
GREQAM (UMR CNRS 6579)
Centre de la Vieille Charité
2, rue de la Charité
13236 Marseille cedex 02

Bureau 320
Tel : +33 4 91 14 07 27 (standard)
Tel : +33 4 91 14 07 70 (secrétariat)
Tel : +33 4 91 14 07 47 (bureau)
Fax : +33 4 91 90 02 27

e-mail: murat.yildizo...@univ-cezanne.fr
www : http://www.vcharite.univ-mrs.fr/PP/yildi/index.html
http://www.twitter.com/yildizoglu
__


Re: Help Needed in LYX

2009-06-12 Thread Olivier Ripoll

esrone noel wrote:

Good day,
I have been using lyx 1.5 version to type up my journals for the past few 
months. However I have asked someone to assist me in typing and I told them to 
download lyx from the internet. Unknowing to me, that there were different 
versions available on the internet, the person downloaded  
LyX-1.6.3-1-Installer.exe
When they were finished downloading and typing up the document I gave them they sent it to me. I was unable to open the document using lyx 1.5.  
What I need help with is the following:

Can I do something to make the newer version of lyx to work with lyx 1.5. Right 
now when I try opening the file it is saying ''cannot convert etc etc''

Regards,
Esrone.


Hi,

IIRC, 1.5.7 can open LyX 1.6 fileformat. If you do not want to upgrade 
to 1.6, perhaps you should at least upgrade to 1.5.7.


Best regards,

Olivier



how to skip to next page

2009-06-12 Thread Jason Lillywhite
I have not searched for this answer very well online because I'm not
sure exactly how to ask it in a few words. My problem is simple: I
have a cover page with title and abstract and I want to skip to the
next page to start my Introduction. How do you skip to the next page?
This would be the equivelent of doing Ctrl-Enter in MS-Word.

Thank you!


Re: how to skip to next page

2009-06-12 Thread James C. Sutherland


On Jun 12, 2009, at 8:58 AM, Jason Lillywhite wrote:


I have not searched for this answer very well online because I'm not
sure exactly how to ask it in a few words. My problem is simple: I
have a cover page with title and abstract and I want to skip to the
next page to start my Introduction. How do you skip to the next page?
This would be the equivelent of doing Ctrl-Enter in MS-Word.


Insert - Formatting - New Page


Re: how to skip to next page

2009-06-12 Thread Vincent van Ravesteijn

Jason Lillywhite schreef:

I have not searched for this answer very well online because I'm not
sure exactly how to ask it in a few words. My problem is simple: I
have a cover page with title and abstract and I want to skip to the
next page to start my Introduction. How do you skip to the next page?
This would be the equivelent of doing Ctrl-Enter in MS-Word.

Thank you!
  

Insert-Formatting- (New Page, Page Break, Clear Page, Clear Double Page)

Vincent


Problems with LyX 1.6.3

2009-06-12 Thread Reuven Segev
Hi,
I downloaded and installed version 1.6.3 (classic rather the alternative
installer) on WinXP64 system (over my previous 1.6.2 version). When I opened
documents, it would not compile them. It generated an empty tex file and issued
an error message about exporting buffer (don't have the exact wording). I tried
to reinstall. Same result. Reinstalled 1.6.2 and it works fine/

Did anybody have a similar experience? Ideas on how to solve the problem?

Thanks,
Reuven



Re: Need Verdana font for the PDF generated from Lyx

2009-06-12 Thread John Culleton
On Friday 12 June 2009 10:31:51 am Parul Bali wrote:
 Hi everyone,

 Could you please suggest any good packages that might be
 available if I want Verdana font for the PDF that's generated
 from Lyx, instead of the standard options available in Lyx.

 Thank you.

 Parul

Verdana is Microsoft's name for Helvetica.  Try Helvetica instead. 

-- 
John Culleton
Create Book Covers with Scribus/e-book $5.95
http://www.booklocker.com/books/4055.html


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Anders Ekberg

On 12 jun 2009, at 11.06, Graham Smith wrote:


Anders

Anders Ekberg wrote:
You can always try to change the encoding, e.g. using TextWrangler  
and see if that changes anything.
I'm sorry to say I don't how to do this. Do you mean my little bit  
of code giving me problems or do you mean the entire Lyx file.


If its the former do I change the encoding and paste it back into  
Lyx. I'm afraid I am  over my threshold of understanding here.


Yes, that was the quick-and-dirty idea. Open in TextWrangler, use save  
as... and click option to specify the encoding you want (there are  
probably much fancier ways of doing it).


However, if I type the commands into an Emacs buffer I get some  
strange syntax handling


cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002; etc

With  the X2001=2001  the   and the numbers are pink (including  
the X) and the = is black the ; is also pink and the ' is black


but in the

X2002=2002 this is reversed the  and the ; are still pink but  
so is the = sign. The X2002 and 2002 are now black, which is the  
pattern that persists for the rest of the code.


This is defenitely far over my (very low) threshold of understanding ;-)

/Anders


Re: Problems with LyX 1.6.3

2009-06-12 Thread Uwe Stöhr

Reuven Segev schrieb:


I downloaded and installed version 1.6.3 (classic rather the alternative
installer) on WinXP64 system (over my previous 1.6.2 version)...


Installing one version over another is in general problematic on Windows (not only for LyX). But 
when you uninstall LyX 1.6.2 and then install 1.6.3 it should work.


regards Uwe


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Anders,

Thanks again.

I have now been sent some trial code that works with Lyx/SWeave/R on 
Linux, but it is doing nothing on my Mac (with a fresh file). So I 
suspect there may be a real issue here rather than it me.



The strange syntax thing seems to have gone away now, so not sure what 
was going on there.


I think I am stuck now :-(

Graham



Anders Ekberg wrote:

On 12 jun 2009, at 11.06, Graham Smith wrote:


Anders

Anders Ekberg wrote:
You can always try to change the encoding, e.g. using TextWrangler 
and see if that changes anything.
I'm sorry to say I don't how to do this. Do you mean my little bit of 
code giving me problems or do you mean the entire Lyx file.


If its the former do I change the encoding and paste it back into 
Lyx. I'm afraid I am  over my threshold of understanding here.


Yes, that was the quick-and-dirty idea. Open in TextWrangler, use save 
as... and click option to specify the encoding you want (there are 
probably much fancier ways of doing it).


However, if I type the commands into an Emacs buffer I get some 
strange syntax handling


cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002; etc

With  the X2001=2001  the   and the numbers are pink (including 
the X) and the = is black the ; is also pink and the ' is black


but in the

X2002=2002 this is reversed the  and the ; are still pink but so 
is the = sign. The X2002 and 2002 are now black, which is the pattern 
that persists for the rest of the code.


This is defenitely far over my (very low) threshold of understanding ;-)

/Anders


--
Graham M Smith
graham.sm...@myotis.co.uk

Station Cottage, Station Road
Binegar, Somerset
BA3 4UQ




Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

With help from Anders and Jay, part of this problem seems to be solved.

Some sample code from Jay, refused to run until the document settings 
were changed to use utf8 encoding.


This worked for the sample code, but didn't help with my code.

However, I notice that with my code in the latex code window, the code 
is highlighted between the $ signs at the start of the code


cabbages$Year-recode(cabbages$Year,'.

I wonder if this suggests that the $ sign is being interpreted in some 
odd way.


Graham

Graham Smith wrote:

I've started using Sweave and having a problem

The code in Lyx is

library (car)

cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003; 
etc


But its appearing in the PDF as


 cabbages$Year - recode(cabbages$Year, 
\X2001\=\2001\;\X2002\=\2002\;\X2003\=\2003\;\ etc


And obviously isn't working as printing out incorrectly.

Can anyone suggest what is happening here.

Many thanks,

Graham



--
Graham M Smith
graham.sm...@myotis.co.uk

Station Cottage, Station Road
Binegar, Somerset
BA3 4UQ




LyX crashes upon referencing images

2009-06-12 Thread Jason Lillywhite
I am running LyX in Ubuntu 9.04 and I'm working on a document that
contains many figures and tables. LyX has crashed multiple times when
working with these figures I'm inserting.

I'm inserting figures by doing a float, then insert graphic. I found
that when I try to adjust the output size and/or LyX display size at
the time of first importing the image, it tends to crash the program.
I do not have a problem if I insert the graphic, close the dialogue
box, then edit the image settings after. I'm inserting bmp images. I'm
using an article Document Class.


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Well this is a bit embarrassing , it seems I had two problems, one
was that the recode command seems to need utf8 coding rather than the
Lyx default (which is fine), plus I had typing error in the data set,
which is not fine :-(

I rewrote my code using the with command which allowed it to run, but
it then became obvious that the recoded results were not what I had
expected. The typing error then being obvious.

The first entry in my code was 'X2001'='2001' but the first level in
the data set was X20001 and this was enough to cause recode to fail
in my original code, but run using the with command.

Its now working. BUT the code still runs off the edge of the page and 
doesn't wrap with a continuation symbol. Anyone have any suggestions for 
fixing this one?


Thanks to everyone for there help.

Graham Smith wrote:

I've started using Sweave and having a problem

The code in Lyx is

library (car)

cabbages$Year-recode(cabbages$Year,'X2001=2001;X2002=2002;X2003=2003; 
etc


But its appearing in the PDF as


 cabbages$Year - recode(cabbages$Year, 
\X2001\=\2001\;\X2002\=\2002\;\X2003\=\2003\;\ etc


And obviously isn't working as printing out incorrectly.

Can anyone suggest what is happening here.

Many thanks,

Graham



--
Graham M Smith
graham.sm...@myotis.co.uk

Station Cottage, Station Road
Binegar, Somerset
BA3 4UQ




Re: Problems with LyX 1.6.3

2009-06-12 Thread Uwe Stöhr

Reuven Segev schrieb:

Thanks a lot for your reply and help. I have a question though: If I 
uninstall 1.6.2, would it keep my preferences, e.g., user interface, 
keyboard shortcuts, file handling preferences, etc.?


I cannot speak for the standard installer, but as this is possible with my alternative installer, I 
guess that also the standard installer supports this. (There is an option in the uninstaller to keep 
your preferences.)


regards Uwe


Re: LyX crashes upon referencing images

2009-06-12 Thread Vincent van Ravesteijn

Jason Lillywhite schreef:

I am running LyX in Ubuntu 9.04 and I'm working on a document that
contains many figures and tables. LyX has crashed multiple times when
working with these figures I'm inserting.

I'm inserting figures by doing a float, then insert graphic. I found
that when I try to adjust the output size and/or LyX display size at
the time of first importing the image, it tends to crash the program.
I do not have a problem if I insert the graphic, close the dialogue
box, then edit the image settings after. I'm inserting bmp images. I'm
using an article Document Class.
  

Please try to upgrade your qt from 4.5.0 to 4.5.1 (if you didn't do so yet).

Vincent


Re: LyX crashes upon referencing images

2009-06-12 Thread Richard Heck

Vincent van Ravesteijn wrote:

Jason Lillywhite schreef:

I am running LyX in Ubuntu 9.04 and I'm working on a document that
contains many figures and tables. LyX has crashed multiple times when
working with these figures I'm inserting.

I'm inserting figures by doing a float, then insert graphic. I found
that when I try to adjust the output size and/or LyX display size at
the time of first importing the image, it tends to crash the program.
I do not have a problem if I insert the graphic, close the dialogue
box, then edit the image settings after. I'm inserting bmp images. I'm
using an article Document Class.
  
Please try to upgrade your qt from 4.5.0 to 4.5.1 (if you didn't do so 
yet).


And if that doesn't work, see if you can't get a perfect recipe for 
reproducing the crash. Then we can fix it. Otherwise, we are fishing.


rh



Re: Elyxer and Lyx 1.6.3

2009-06-12 Thread Alex Fernandez
Hi Murat,

On Fri, Jun 12, 2009 at 4:56 PM, Murat
Yildizoglumurat.yildizo...@univ-cezanne.fr wrote:
 I am trying elyxer under the last version of Lyx (1.6.3) . I have followed
 the instructions in the list given by Olivier:

Wasn't LyX 1.6.3 supposed to support eLyXer out of the box? I haven't
downloaded it to try, but I was under that impression. Well, maybe
not.

 But, when I do View/HTML or Export/HTML Lyx continues to try to run htlatex.
 I am probably missing something but I do not know what :-(

I am sorry I can't help you. Surely someone else on the list can help
you. Meanwhile you can try manual conversion on a DOS terminal,
writing:
   Python.exe route_to_elyxer\elyxer.py filein.lyx fileout.html

Let us hope that LyX 1.6.4 comes already preconfigured to use eLyXer
and that the Windows installer optionally installs it. It would solve
a lot of problems for users.

Thanks,

Alex.


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Phillippe.

I have already replied directly to you on this (in error) but to keep 
the help within the list  I have repeated my answers here and added  
some information:


If I convert the SWeave Scrap environment to Lyx Code,  it  compiles (as 
a bit of text) to PDF as expected, no strange escape codes.


<<>>=
library (car)
cabbages$Year<-recode(cabbages$Year,'"X2001"="2001";"X2002"="2002";"X2003"="2003";"X2004"="2004";etc
@

So it seems to be definitely connected with the Sweave part of the process

The rest of my reply is below

Philippe Grosjean wrote:

1) Have you placed your code in an ERT (Tex code)?
No,  I have now got a twelve chunks of Sweave code in the document 
(which all work) and none are in ERT


2) Did you enclose it with the required tags for noweb (INSIDE de 
ERT), i.e.,


<<>>=
library (car)
cabbages$Year<-recode(cabbages$Year,'"X2001"="2001";"X2002"="2002";"X2003"="2003"; 


etc
@
Yes,  the full code copied from Lyx is (its in the Scrap environment and 
I have added the +'s to make it fit the email):


<<>>=library(car)
cabbages$Year<-recode(cabbages$Year,'"X2001"="2001";"X2002"="2002";"X2003"="2003";"X2004"="2004"; 

+"X2005"="2005";"X2006"="2006";"X2007"="2007";"X2008"="2008";"X2009"="2009";"X2010"="2010"; 


+"X2011"="2011";"X2012"="2012"')
@


3) Did you run Sweave on the Noweb version produced?
Not manually in any way, I have just compiled to PDF from Lyx as I have 
been doing successfully with all the other SWeave chunks, up until this 
one.


But I haven't called an R package before, or used the recode function.  
Which are functioning in R OK, as I try the code in R first before 
copying into Lyx.


Strangely of course, it is compiling OK and giving me a PDF. With the 
other chunks of code, if I made a mistake, it refused to compile and I 
got an Rcmd error.


Not sure if that gives any more of a clue.

Graham




Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith
I wonder if its worth mentioning I am using a Mac, as it seems to be 
character code issue and maybe its something peculiar to the Mac.


Graham




Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Anders Ekberg

On 12 jun 2009, at 08.59, Graham Smith wrote:

I wonder if its worth mentioning I am using a Mac, as it seems to be  
character code issue and maybe its something peculiar to the Mac.


Graham


You can always try to change the encoding, e.g. using TextWrangler and  
see if that changes anything.


/Anders



Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Anders

Anders Ekberg wrote:
You can always try to change the encoding, e.g. using TextWrangler and 
see if that changes anything.
I'm sorry to say I don't how to do this. Do you mean my little bit of 
code giving me problems or do you mean the entire Lyx file.


If its the former do I change the encoding and paste it back into Lyx. 
I'm afraid I am  over my threshold of understanding here.


However, if I type the commands into an Emacs buffer I get some strange 
syntax handling


cabbages$Year<-recode(cabbages$Year,'"X2001"="2001;"X2002"="2002"; etc

With  the "X2001"="2001"  the  " and the numbers are pink (including the 
X) and the = is black the ; is also pink and the ' is black


but in the

"X2002"="2002" this is reversed the " and the ; are still pink but so is 
the = sign. The X2002 and 2002 are now black, which is the pattern that 
persists for the rest of the code.



Graham






Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

I have now tried reversing the single quotes and double quotes as here:

cabbages$Year<-recode(cabbages$Year,"'X2001'='2001';'X2002'='2002';'X2003'='2003'; 
etc


This is now compiling verbatim (so no spurious slashes) when it appears 
in the PDF , but it is running off the edge of the page and not actually 
running in R.


My next command

<<>>=
head(cabbages, n=10)
@


is showing no recoding has taken place.

Graham


error in make

2009-06-12 Thread bb
I tried to install lyx 1.6.3 on Suse 11.1 32 bit. In applying make I get
the following error message (only the last lines of very many). Does
anyone have an idea how to proceed? 

regards bb 

.
make[4]: Entering directory `/home/bb/lyx/lyx-1.6.3/src'
/bin/sh ../libtool --tag=CXX   --mode=link g++  -O2   -o liblyxmathed.la
InsetMathAMSArray.lo InsetMathArray.lo InsetMathBig.lo
InsetMathBoldSymbol.lo InsetMathBox.lo InsetMathBrace.lo InsetMath.lo
InsetMathCases.lo InsetMathChar.lo InsetMathColor.lo CommandInset.lo
InsetMathComment.lo InsetMathDecoration.lo InsetMathDelim.lo
InsetMathDiff.lo InsetMathDots.lo InsetMathEnsureMath.lo InsetMathEnv.lo
InsetMathExFunc.lo InsetMathExInt.lo InsetMathFont.lo
InsetMathFontOld.lo InsetMathFrac.lo InsetMathGrid.lo InsetMathHull.lo
InsetMathKern.lo InsetMathLefteqn.lo InsetMathLim.lo MathMacro.lo
InsetMathMatrix.lo InsetMathNest.lo InsetMathNumber.lo
InsetMathOverset.lo InsetMathPar.lo InsetMathPhantom.lo InsetMathRef.lo
InsetMathRoot.lo InsetMathScript.lo InsetMathSize.lo InsetMathSpace.lo
InsetMathSpecialChar.lo InsetMathSplit.lo InsetMathSqrt.lo
InsetMathStackrel.lo InsetMathString.lo InsetMathSubstack.lo
InsetMathSymbol.lo InsetMathTabular.lo InsetMathUnderset.lo
InsetMathUnknown.lo InsetMathXArrow.lo InsetMathXYMatrix.lo MathAtom.lo
MathAutoCorrect.lo MathData.lo MathExtern.lo MathFactory.lo
MathMacroArgument.lo MacroTable.lo MathMacroTemplate.lo MathParser.lo
MathStream.lo MathSupport.lo TextPainter.lo   
libtool: link: `InsetMathNest.lo' is not a valid libtool object
make[4]: *** [liblyxmathed.la] Fehler 1
make[4]: Leaving directory `/home/bb/lyx/lyx-1.6.3/src'
make[3]: *** [all-recursive] Fehler 1
make[3]: Leaving directory `/home/bb/lyx/lyx-1.6.3/src'
make[2]: *** [all] Fehler 2
make[2]: Leaving directory `/home/bb/lyx/lyx-1.6.3/src'
make[1]: *** [all-recursive] Fehler 1
make[1]: Leaving directory `/home/bb/lyx/lyx-1.6.3'
make: *** [all] Fehler 2
b...@linux-8tal:~/lyx/lyx-1.6.3> 



rpm install failes

2009-06-12 Thread bb
As the installation from source failed I tried to install rpm-packages:

Paket /tmp/lyx-1.6.2-openSuse_11_1-1.i586-3.rpm kann nicht installiert
werden.

Details:
Subprocess failed. Error: RPM fehlgeschlagen: error: Failed
dependencies:
libAiksaurus-1.2.so.0 is needed by lyx-1.6.2-1.i586

After installing that package a new trial gives the Message:
Paket /tmp/lyx-1.6.2-openSuse_11_1-1.i586-7.rpm kann nicht installiert
werden.

Details:
Subprocess failed. Error: RPM fehlgeschlagen: /var/tmp/rpm-tmp.88270:
line 2: texhash: command not found
error: %post(lyx-1.6.2-1.i586) scriptlet failed, exit status 127

Whe trying to install lyx-1.6.2

Paket /tmp/lyx-1.6.2-openSuse_11_1-1.i586-10.rpm kann nicht installiert
werden.

Details:
Subprocess failed. Error: RPM fehlgeschlagen:   package lyx-1.6.2-1.i586
is already installed

I think there is something wrong with the rpm-packages. 

At least I was able to install lyx-1.6.0 on suse 11.1

Regards BB





Re: rpm install failes

2009-06-12 Thread Jürgen Spitzmüller
bb wrote:
> As the installation from source failed I tried to install rpm-packages:

Try this one:
http://software.opensuse.org/ymp/KDE:Backports/openSUSE_11.1/lyx.ymp

(this is the official openSuse RPM for LyX 1.6.3).

HTH,
Jürgen


Need Verdana font for the PDF generated from Lyx

2009-06-12 Thread Parul Bali
Hi everyone,

Could you please suggest any good packages that might be available if I want
Verdana font for the PDF that's generated from Lyx, instead of the standard
options available in Lyx.

Thank you.

Parul


installation failed again

2009-06-12 Thread bb
I tried to install from
software.opensuse.org/ymp/KDE:Backports/openSUSE_11.1/lyx.ymp
Negativ! 
Installation of package ./i586/lyx-1.6.3-2.1.i586.rpm failed.
Details:
Subprocess failed. Error: RPM fehlgeschlagen: error: unpacking of
archive failed on file /usr/share/texmf/tex/latex/lyx: cpio: rename
failed - Is a directory

Regards BB




Re: installation failed again

2009-06-12 Thread Jürgen Spitzmüller
bb wrote:
> Subprocess failed. Error: RPM fehlgeschlagen: error: unpacking of
> archive failed on file /usr/share/texmf/tex/latex/lyx: cpio: rename
> failed - Is a directory

rename the directory
/usr/share/texmf/tex/latex/lyx
to
/usr/share/texmf/tex/latex/lyx-old
and try again.

Jürgen



Help Needed in LYX

2009-06-12 Thread esrone noel
Good day,
I have been using lyx 1.5 version to type up my journals for the past few 
months. However I have asked someone to assist me in typing and I told them to 
download lyx from the internet. Unknowing to me, that there were different 
versions available on the internet, the person downloaded  
LyX-1.6.3-1-Installer.exe
When they were finished downloading and typing up the document I gave them they 
sent it to me. I was unable to open the document using lyx 1.5.  
What I need help with is the following:
Can I do something to make the newer version of lyx to work with lyx 1.5. Right 
now when I try opening the file it is saying ''cannot convert etc etc''

Regards,
Esrone.


  

SV: Need Verdana font for the PDF generated from Lyx

2009-06-12 Thread Ingar Pareliussen
I guess this package is your best bet. 

http://dante.ctan.org/CTAN/fonts/winfonts/

Read the README and the winfonts-doc.pdf for more information.

Ingar


SV: Help Needed in LYX

2009-06-12 Thread Ingar Pareliussen
You need to get the 1.6 version and use the file->export->Lyx 1.5.

I hope this helps.

Ingar


Elyxer and Lyx 1.6.3

2009-06-12 Thread Murat Yildizoglu
Hi,
I am trying elyxer under the last version of Lyx (1.6.3) . I have followed
the instructions in the list given by Olivier:


"I managed to get elyxer working by doing the following:

- copy elyxer.py to the script folder ("C:\Program Files\LyX
1.6.3\Resources\scripts")
on my machine,- in Preferences -> Converters, in the LyX -> HTML, modify the
command to be:


python $$s/scripts/elyxer.py $$i $$o"


I have installed the last version (0.29) of the elyxer.py script in the
folder indicated by Olivier and changed Lyx->HTML conversion command as
indicated.
I have done a reconfigure, just incase.

But, when I do View/HTML or Export/HTML Lyx continues to try to run htlatex.
I am probably missing something but I do not know what :-(

Sorry if I am making a stupid mistake but I would appreciate a lot your help
at this point, since I am just blocked...

Regards,

Murat
-- 
Prof. Murat Yildizoglu
Université Paul Cézanne (Aix-Marseille 3)
GREQAM (UMR CNRS 6579)
Centre de la Vieille Charité
2, rue de la Charité
13236 Marseille cedex 02

Bureau 320
Tel : +33 4 91 14 07 27 (standard)
Tel : +33 4 91 14 07 70 (secrétariat)
Tel : +33 4 91 14 07 47 (bureau)
Fax : +33 4 91 90 02 27

e-mail: murat.yildizo...@univ-cezanne.fr
www : http://www.vcharite.univ-mrs.fr/PP/yildi/index.html
http://www.twitter.com/yildizoglu
__


Re: Help Needed in LYX

2009-06-12 Thread Olivier Ripoll

esrone noel wrote:

Good day,
I have been using lyx 1.5 version to type up my journals for the past few 
months. However I have asked someone to assist me in typing and I told them to 
download lyx from the internet. Unknowing to me, that there were different 
versions available on the internet, the person downloaded  
LyX-1.6.3-1-Installer.exe
When they were finished downloading and typing up the document I gave them they sent it to me. I was unable to open the document using lyx 1.5.  
What I need help with is the following:

Can I do something to make the newer version of lyx to work with lyx 1.5. Right 
now when I try opening the file it is saying ''cannot convert etc etc''

Regards,
Esrone.


Hi,

IIRC, 1.5.7 can open LyX 1.6 fileformat. If you do not want to upgrade 
to 1.6, perhaps you should at least upgrade to 1.5.7.


Best regards,

Olivier



how to skip to next page

2009-06-12 Thread Jason Lillywhite
I have not searched for this answer very well online because I'm not
sure exactly how to ask it in a few words. My problem is simple: I
have a cover page with title and abstract and I want to skip to the
next page to start my Introduction. How do you skip to the next page?
This would be the equivelent of doing Ctrl-Enter in MS-Word.

Thank you!


Re: how to skip to next page

2009-06-12 Thread James C. Sutherland


On Jun 12, 2009, at 8:58 AM, Jason Lillywhite wrote:


I have not searched for this answer very well online because I'm not
sure exactly how to ask it in a few words. My problem is simple: I
have a cover page with title and abstract and I want to skip to the
next page to start my Introduction. How do you skip to the next page?
This would be the equivelent of doing Ctrl-Enter in MS-Word.


Insert -> Formatting -> New Page


Re: how to skip to next page

2009-06-12 Thread Vincent van Ravesteijn

Jason Lillywhite schreef:

I have not searched for this answer very well online because I'm not
sure exactly how to ask it in a few words. My problem is simple: I
have a cover page with title and abstract and I want to skip to the
next page to start my Introduction. How do you skip to the next page?
This would be the equivelent of doing Ctrl-Enter in MS-Word.

Thank you!
  

Insert->Formatting-> (New Page, Page Break, Clear Page, Clear Double Page)

Vincent


Problems with LyX 1.6.3

2009-06-12 Thread Reuven Segev
Hi,
I downloaded and installed version 1.6.3 (classic rather the alternative
installer) on WinXP64 system (over my previous 1.6.2 version). When I opened
documents, it would not compile them. It generated an empty tex file and issued
an error message about exporting buffer (don't have the exact wording). I tried
to reinstall. Same result. Reinstalled 1.6.2 and it works fine/

Did anybody have a similar experience? Ideas on how to solve the problem?

Thanks,
Reuven



Re: Need Verdana font for the PDF generated from Lyx

2009-06-12 Thread John Culleton
On Friday 12 June 2009 10:31:51 am Parul Bali wrote:
> Hi everyone,
>
> Could you please suggest any good packages that might be
> available if I want Verdana font for the PDF that's generated
> from Lyx, instead of the standard options available in Lyx.
>
> Thank you.
>
> Parul

Verdana is Microsoft's name for Helvetica.  Try Helvetica instead. 

-- 
John Culleton
Create Book Covers with Scribus/e-book $5.95
http://www.booklocker.com/books/4055.html


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Anders Ekberg

On 12 jun 2009, at 11.06, Graham Smith wrote:


Anders

Anders Ekberg wrote:
You can always try to change the encoding, e.g. using TextWrangler  
and see if that changes anything.
I'm sorry to say I don't how to do this. Do you mean my little bit  
of code giving me problems or do you mean the entire Lyx file.


If its the former do I change the encoding and paste it back into  
Lyx. I'm afraid I am  over my threshold of understanding here.


Yes, that was the quick-and-dirty idea. Open in TextWrangler, use save  
as... and click option to specify the encoding you want (there are  
probably much fancier ways of doing it).


However, if I type the commands into an Emacs buffer I get some  
strange syntax handling


cabbages$Year<-recode(cabbages$Year,'"X2001"="2001;"X2002"="2002"; etc

With  the "X2001"="2001"  the  " and the numbers are pink (including  
the X) and the = is black the ; is also pink and the ' is black


but in the

"X2002"="2002" this is reversed the " and the ; are still pink but  
so is the = sign. The X2002 and 2002 are now black, which is the  
pattern that persists for the rest of the code.


This is defenitely far over my (very low) threshold of understanding ;-)

/Anders


Re: Problems with LyX 1.6.3

2009-06-12 Thread Uwe Stöhr

Reuven Segev schrieb:


I downloaded and installed version 1.6.3 (classic rather the alternative
installer) on WinXP64 system (over my previous 1.6.2 version)...


Installing one version over another is in general problematic on Windows (not only for LyX). But 
when you uninstall LyX 1.6.2 and then install 1.6.3 it should work.


regards Uwe


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Anders,

Thanks again.

I have now been sent some trial code that works with Lyx/SWeave/R on 
Linux, but it is doing nothing on my Mac (with a fresh file). So I 
suspect there may be a real issue here rather than it me.



The strange syntax thing seems to have gone away now, so not sure what 
was going on there.


I think I am stuck now :-(

Graham



Anders Ekberg wrote:

On 12 jun 2009, at 11.06, Graham Smith wrote:


Anders

Anders Ekberg wrote:
You can always try to change the encoding, e.g. using TextWrangler 
and see if that changes anything.
I'm sorry to say I don't how to do this. Do you mean my little bit of 
code giving me problems or do you mean the entire Lyx file.


If its the former do I change the encoding and paste it back into 
Lyx. I'm afraid I am  over my threshold of understanding here.


Yes, that was the quick-and-dirty idea. Open in TextWrangler, use save 
as... and click option to specify the encoding you want (there are 
probably much fancier ways of doing it).


However, if I type the commands into an Emacs buffer I get some 
strange syntax handling


cabbages$Year<-recode(cabbages$Year,'"X2001"="2001;"X2002"="2002"; etc

With  the "X2001"="2001"  the  " and the numbers are pink (including 
the X) and the = is black the ; is also pink and the ' is black


but in the

"X2002"="2002" this is reversed the " and the ; are still pink but so 
is the = sign. The X2002 and 2002 are now black, which is the pattern 
that persists for the rest of the code.


This is defenitely far over my (very low) threshold of understanding ;-)

/Anders


--
Graham M Smith
graham.sm...@myotis.co.uk

Station Cottage, Station Road
Binegar, Somerset
BA3 4UQ




Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

With help from Anders and Jay, part of this problem seems to be solved.

Some sample code from Jay, refused to run until the document settings 
were changed to use utf8 encoding.


This worked for the sample code, but didn't help with my code.

However, I notice that with my code in the latex code window, the code 
is highlighted between the $ signs at the start of the code


cabbages$Year<-recode(cabbages$Year,"'.

I wonder if this suggests that the $ sign is being interpreted in some 
odd way.


Graham

Graham Smith wrote:

I've started using Sweave and having a problem

The code in Lyx is

library (car)

cabbages$Year<-recode(cabbages$Year,'"X2001"="2001";"X2002"="2002";"X2003"="2003"; 
etc


But its appearing in the PDF as


> cabbages$Year <- recode(cabbages$Year, 
"\"X2001\"=\"2001\";\"X2002\"=\"2002\";\"X2003\"=\"2003\";\ etc


And obviously isn't working as printing out incorrectly.

Can anyone suggest what is happening here.

Many thanks,

Graham



--
Graham M Smith
graham.sm...@myotis.co.uk

Station Cottage, Station Road
Binegar, Somerset
BA3 4UQ




LyX crashes upon referencing images

2009-06-12 Thread Jason Lillywhite
I am running LyX in Ubuntu 9.04 and I'm working on a document that
contains many figures and tables. LyX has crashed multiple times when
working with these figures I'm inserting.

I'm inserting figures by doing a float, then insert graphic. I found
that when I try to adjust the output size and/or LyX display size at
the time of first importing the image, it tends to crash the program.
I do not have a problem if I insert the graphic, close the dialogue
box, then edit the image settings after. I'm inserting bmp images. I'm
using an article Document Class.


Re: Sweave code full of escape codes when printed?

2009-06-12 Thread Graham Smith

Well this is a bit embarrassing , it seems I had two problems, one
was that the recode command seems to need utf8 coding rather than the
Lyx default (which is fine), plus I had typing error in the data set,
which is not fine :-(

I rewrote my code using the "with" command which allowed it to run, but
it then became obvious that the recoded results were not what I had
expected. The typing error then being obvious.

The first entry in my code was 'X2001'='2001' but the first level in
the data set was "X20001" and this was enough to cause recode to fail
in my original code, but run using the with command.

Its now working. BUT the code still runs off the edge of the page and 
doesn't wrap with a continuation symbol. Anyone have any suggestions for 
fixing this one?


Thanks to everyone for there help.

Graham Smith wrote:

I've started using Sweave and having a problem

The code in Lyx is

library (car)

cabbages$Year<-recode(cabbages$Year,'"X2001"="2001";"X2002"="2002";"X2003"="2003"; 
etc


But its appearing in the PDF as


> cabbages$Year <- recode(cabbages$Year, 
"\"X2001\"=\"2001\";\"X2002\"=\"2002\";\"X2003\"=\"2003\";\ etc


And obviously isn't working as printing out incorrectly.

Can anyone suggest what is happening here.

Many thanks,

Graham



--
Graham M Smith
graham.sm...@myotis.co.uk

Station Cottage, Station Road
Binegar, Somerset
BA3 4UQ




Re: Problems with LyX 1.6.3

2009-06-12 Thread Uwe Stöhr

Reuven Segev schrieb:

Thanks a lot for your reply and help. I have a question though: If I 
uninstall 1.6.2, would it keep my preferences, e.g., user interface, 
keyboard shortcuts, file handling preferences, etc.?


I cannot speak for the standard installer, but as this is possible with my alternative installer, I 
guess that also the standard installer supports this. (There is an option in the uninstaller to keep 
your preferences.)


regards Uwe


Re: LyX crashes upon referencing images

2009-06-12 Thread Vincent van Ravesteijn

Jason Lillywhite schreef:

I am running LyX in Ubuntu 9.04 and I'm working on a document that
contains many figures and tables. LyX has crashed multiple times when
working with these figures I'm inserting.

I'm inserting figures by doing a float, then insert graphic. I found
that when I try to adjust the output size and/or LyX display size at
the time of first importing the image, it tends to crash the program.
I do not have a problem if I insert the graphic, close the dialogue
box, then edit the image settings after. I'm inserting bmp images. I'm
using an article Document Class.
  

Please try to upgrade your qt from 4.5.0 to 4.5.1 (if you didn't do so yet).

Vincent


Re: LyX crashes upon referencing images

2009-06-12 Thread Richard Heck

Vincent van Ravesteijn wrote:

Jason Lillywhite schreef:

I am running LyX in Ubuntu 9.04 and I'm working on a document that
contains many figures and tables. LyX has crashed multiple times when
working with these figures I'm inserting.

I'm inserting figures by doing a float, then insert graphic. I found
that when I try to adjust the output size and/or LyX display size at
the time of first importing the image, it tends to crash the program.
I do not have a problem if I insert the graphic, close the dialogue
box, then edit the image settings after. I'm inserting bmp images. I'm
using an article Document Class.
  
Please try to upgrade your qt from 4.5.0 to 4.5.1 (if you didn't do so 
yet).


And if that doesn't work, see if you can't get a perfect "recipe" for 
reproducing the crash. Then we can fix it. Otherwise, we are fishing.


rh



Re: Elyxer and Lyx 1.6.3

2009-06-12 Thread Alex Fernandez
Hi Murat,

On Fri, Jun 12, 2009 at 4:56 PM, Murat
Yildizoglu wrote:
> I am trying elyxer under the last version of Lyx (1.6.3) . I have followed
> the instructions in the list given by Olivier:

Wasn't LyX 1.6.3 supposed to support eLyXer out of the box? I haven't
downloaded it to try, but I was under that impression. Well, maybe
not.

> But, when I do View/HTML or Export/HTML Lyx continues to try to run htlatex.
> I am probably missing something but I do not know what :-(

I am sorry I can't help you. Surely someone else on the list can help
you. Meanwhile you can try manual conversion on a DOS terminal,
writing:
  > Python.exe \elyxer.py filein.lyx fileout.html

Let us hope that LyX 1.6.4 comes already preconfigured to use eLyXer
and that the Windows installer optionally installs it. It would solve
a lot of problems for users.

Thanks,

Alex.