Re: Where is the right place for Biblatex redefinitions?

2022-09-28 Thread Jürgen Spitzmüller
Am Mittwoch, dem 28.09.2022 um 11:21 +0200 schrieb kzsta...@gmail.com:
> This may be solved by enclosing your specific settings in
> \AtEndPreamble{…}, for which you need the package etoolbox:

Or, with a reasonably new LaTeX release, use

\AddToHook{package/biblatex/after}{
...
}

which will issue the code as soon as biblatex has been loaded.

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RE: Where is the right place for Biblatex redefinitions?

2022-09-28 Thread kzstatis
>I need to apply some renewcommands to the standard ext-biblatex-verbose-trad3 
>style
>
>% specific settings:
>\DeclareFieldFormat{biblabeldate}{#1}
>\DeclareDelimFormat[bib]{nameyeardelim}{\addperiod\space}
>\DeclareFieldFormat{issuedate}{#1}
>\renewcommand*{\volnumdatedelim}{\addcomma\space}
>\renewcommand{\newunitpunct}{\addcomma\space}
>\renewcommand*{\locpubdelim}{\addcoma\space}
>
>If I put them in the preamble, they seem to be taken into account in the pdf, 
>but they cause a lot of error warnings (sequences of "undefined" >and "already 
>defined") and I would like to avoid that, since my document is very long and I 
>might miss other error warnings. 
>My question is: Is there a better way of inserting these lines? Before the 
>bibliography in TeX code? Or where?

When you make a pdf, LyX first exports the lyx file to latex. It places the 
\usepackage for biblatex after the document specific preamble. So when pdflatex 
sees your preamble settings, it does not know yet biblatex and its commands, 
such as biblabeldate.

This may be solved by enclosing your specific settings in \AtEndPreamble{…}, 
for which you need the package etoolbox:

\usepackage{etoolbox}
\AtEndPreamble{%
\DeclareFieldFormat{biblabeldate}{#1}
\DeclareDelimFormat[bib]{nameyeardelim}{\addperiod\space}
\DeclareFieldFormat{issuedate}{#1}
\renewcommand*{\volnumdatedelim}{\addcomma\space}
\renewcommand{\newunitpunct}{\addcomma\space}
\renewcommand*{\locpubdelim}{\addcoma\space}
}

This ensures that your specific settings are read at the very end of the 
preamble, when biblatex has already been read.

Kees


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Where is the right place for Biblatex redefinitions?

2022-09-28 Thread Mathias Girel
Dear Lyx users,
I need to apply some renewcommands to the standard
ext-biblatex-verbose-trad3 style

% specific settings:
\DeclareFieldFormat{biblabeldate}{#1}
\DeclareDelimFormat[bib]{nameyeardelim}{\addperiod\space}
\DeclareFieldFormat{issuedate}{#1}
\renewcommand*{\volnumdatedelim}{\addcomma\space}
\renewcommand{\newunitpunct}{\addcomma\space}
\renewcommand*{\locpubdelim}{\addcoma\space}

If I put them in the preamble, they seem to be taken into account in the
pdf, but they cause a lot of error warnings (sequences of "undefined" and
"already defined") and I would like to avoid that, since my document is
very long and I might miss other error warnings.
My question is: Is there a better way of inserting these lines? Before the
bibliography in TeX code? Or where?
Thanks for your help!
Best regards
Mathias
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Re: biblatex: excluding shorthand entries from the main bibliography in LyX ?

2022-08-21 Thread Mathias Girel
Edit : I was wrong introducing things in the preamble
Inserting in Tex code, at the end of the doc, just before the "commented
off" biblatex box the following lines did the trick
---
\printshorthands
\defbibcheck{noshorthand}{\iffieldundef{shorthand}{}{\skipentry}}
\printbibliography[check=noshorthand]
---
I then have my list of shorthands, and the biblio minus the titles with
shorthands.
There might be some "cleaner" ways to do it, I'll appreciate any
suggestions!
Best regards
Mathias


On Sun, Aug 21, 2022 at 8:57 PM Mathias Girel 
wrote:

> Dear LyX users
> For a monograph, I have a long list of shorthands and wish to remove these
> references from the main bibliography.
>
> I have seen the following link, but it generates errors if I paste the
> beginning of the code in the preamble, and the rest in ERT at the end of
> the doc (including, but not limited to "! LaTeX Error: Missing
> \begin{document}.")
>
>
> https://tex.stackexchange.com/questions/44372/biblatex-excluding-shorthand-entries-from-the-main-bibliography
>
> Is there a simple way to remove the references with shorthands from the
> main biblio in LyX?
> If so, what would be your advice ?
> I’m on OS X BigSur, LyX 2.3.6.2, Texlive 2022. The class is Memoir, I'm
> using variants of verbose for Biblatex.
> The whole doc compiles very well with just the \printshorthands in ERT
> before the Biblatex box, but I wished to remove the duplicates.
>
> With many thanks!
> Mathias
>
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biblatex: excluding shorthand entries from the main bibliography in LyX ?

2022-08-21 Thread Mathias Girel
Dear LyX users
For a monograph, I have a long list of shorthands and wish to remove these
references from the main bibliography.

I have seen the following link, but it generates errors if I paste the
beginning of the code in the preamble, and the rest in ERT at the end of
the doc (including, but not limited to "! LaTeX Error: Missing
\begin{document}.")

https://tex.stackexchange.com/questions/44372/biblatex-excluding-shorthand-entries-from-the-main-bibliography

Is there a simple way to remove the references with shorthands from the
main biblio in LyX?
If so, what would be your advice ?
I’m on OS X BigSur, LyX 2.3.6.2, Texlive 2022. The class is Memoir, I'm
using variants of verbose for Biblatex.
The whole doc compiles very well with just the \printshorthands in ERT
before the Biblatex box, but I wished to remove the duplicates.

With many thanks!
Mathias
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Re: Solved and addendum >Re: biblatex-spbasic

2022-03-16 Thread Herbert Voss via lyx-users




Am 16.03.22 um 09:08 schrieb Wolfgang Engelmann via lyx-users:



Am 16.03.22 um 08:59 schrieb Herbert Voss via lyx-users:



Am 16.03.22 um 08:46 schrieb Wolfgang Engelmann via lyx-users:


I selected biblatex citation style Nature and kept biblatex-spbasic 
for the bibliography style. The citations are now in [number], but 
that's ok.

Thanks, Herbert, for the suggestion.

Wolfgang


Addendum:

This is of course nonsense:

"I selected biblatex citation style Nature and kept biblatex-spbasic 
for

> the bibliography style."

I can't keep biblatex-spbasic, since it is not numeric.
The bibliography style should also be Nature



It is possible to combine the styles:

citestyle=nature, bibstyle=sbbasic

Herbert


You mean biblatex-spbasic (selected from the Biblatex bibliography 
style menu)? But this does not give numbers in the Bibliography, i.e. 
you can't find your citations there.



yes, I meant it more generally. For your need it makes sense to have

citestyle=nature, bibstyle=numeric

Herbert
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Re: Solved and addendum >Re: biblatex-spbasic

2022-03-16 Thread Wolfgang Engelmann via lyx-users




Am 16.03.22 um 08:59 schrieb Herbert Voss via lyx-users:



Am 16.03.22 um 08:46 schrieb Wolfgang Engelmann via lyx-users:


I selected biblatex citation style Nature and kept biblatex-spbasic 
for the bibliography style. The citations are now in [number], but 
that's ok.

Thanks, Herbert, for the suggestion.

Wolfgang


Addendum:

This is of course nonsense:

"I selected biblatex citation style Nature and kept biblatex-spbasic for
> the bibliography style."

I can't keep biblatex-spbasic, since it is not numeric.
The bibliography style should also be Nature



It is possible to combine the styles:

citestyle=nature, bibstyle=sbbasic

Herbert


You mean biblatex-spbasic (selected from the Biblatex bibliography style 
menu)? But this does not give numbers in the Bibliography, i.e. you 
can't find your citations there.


Wolfgang
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Re: Solved and addendum >Re: biblatex-spbasic

2022-03-16 Thread Herbert Voss via lyx-users




Am 16.03.22 um 08:46 schrieb Wolfgang Engelmann via lyx-users:


I selected biblatex citation style Nature and kept biblatex-spbasic 
for the bibliography style. The citations are now in [number], but 
that's ok.

Thanks, Herbert, for the suggestion.

Wolfgang


Addendum:

This is of course nonsense:

"I selected biblatex citation style Nature and kept biblatex-spbasic for
> the bibliography style."

I can't keep biblatex-spbasic, since it is not numeric.
The bibliography style should also be Nature



It is possible to combine the styles:

citestyle=nature, bibstyle=sbbasic

Herbert
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Solved and addendum >Re: biblatex-spbasic

2022-03-16 Thread Wolfgang Engelmann via lyx-users



Am 14.03.22 um 08:59 schrieb Wolfgang Engelmann via lyx-users:



Am 14.03.22 um 08:33 schrieb Wolfgang Engelmann via lyx-users:



Am 14.03.22 um 08:10 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 08:07 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:58 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:53 schrieb Wolfgang Engelmann via lyx-users:



Am 14.03.22 um 07:51 schrieb Herbert Voss via lyx-users:

Am 14.03.22 um 07:47 schrieb Wolfgang Engelmann via lyx-users:




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and 
bib as usual.


Herbert


I meant ONLY the ^7, WITHOUT the footnote


then you also need a bibliography in numeric style. But spbasic has
a bib in author-year-style

Herbert


What would be the next best numeric style to spbasic ?


there is no best, it is the default  style "numeric" with changing 
\cite

to footnotes.



You can try "style=nature"   instead of footnotes



sorry, read "instead of numeric"

Herbert


Thanks, Herbert, for the proposals. I Will take the Nature style.

Wolfgang


I selected biblatex citation style Nature and kept biblatex-spbasic for 
the bibliography style. The citations are now in [number], but that's ok.

Thanks, Herbert, for the suggestion.

Wolfgang


Addendum:

This is of course nonsense:

"I selected biblatex citation style Nature and kept biblatex-spbasic for
> the bibliography style."

I can't keep biblatex-spbasic, since it is not numeric.
The bibliography style should also be Nature

Wolfgang
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Re: biblatex-spbasic

2022-03-14 Thread Wolfgang Engelmann via lyx-users



Am 14.03.22 um 08:33 schrieb Wolfgang Engelmann via lyx-users:



Am 14.03.22 um 08:10 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 08:07 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:58 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:53 schrieb Wolfgang Engelmann via lyx-users:



Am 14.03.22 um 07:51 schrieb Herbert Voss via lyx-users:

Am 14.03.22 um 07:47 schrieb Wolfgang Engelmann via lyx-users:




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and 
bib as usual.


Herbert


I meant ONLY the ^7, WITHOUT the footnote


then you also need a bibliography in numeric style. But spbasic has
a bib in author-year-style

Herbert


What would be the next best numeric style to spbasic ?


there is no best, it is the default  style "numeric" with changing 
\cite

to footnotes.



You can try "style=nature"   instead of footnotes



sorry, read "instead of numeric"

Herbert


Thanks, Herbert, for the proposals. I Will take the Nature style.

Wolfgang


I selected biblatex citation style Nature and kept biblatex-spbasic for 
the bibliography style. The citations are now in [number], but that's ok.

Thanks, Herbert, for the suggestion.

Wolfgang
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Re: biblatex-spbasic

2022-03-14 Thread Wolfgang Engelmann via lyx-users



Am 14.03.22 um 08:10 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 08:07 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:58 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:53 schrieb Wolfgang Engelmann via lyx-users:



Am 14.03.22 um 07:51 schrieb Herbert Voss via lyx-users:

Am 14.03.22 um 07:47 schrieb Wolfgang Engelmann via lyx-users:




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and 
bib as usual.


Herbert


I meant ONLY the ^7, WITHOUT the footnote


then you also need a bibliography in numeric style. But spbasic has
a bib in author-year-style

Herbert


What would be the next best numeric style to spbasic ?


there is no best, it is the default  style "numeric" with changing \cite
to footnotes.



You can try "style=nature"   instead of footnotes



sorry, read "instead of numeric"

Herbert


Thanks, Herbert, for the proposals. I Will take the Nature style.

Wolfgang
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Re: biblatex-spbasic

2022-03-14 Thread Herbert Voss via lyx-users



Am 14.03.22 um 08:07 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:58 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:53 schrieb Wolfgang Engelmann via lyx-users:



Am 14.03.22 um 07:51 schrieb Herbert Voss via lyx-users:

Am 14.03.22 um 07:47 schrieb Wolfgang Engelmann via lyx-users:




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and 
bib as usual.


Herbert


I meant ONLY the ^7, WITHOUT the footnote


then you also need a bibliography in numeric style. But spbasic has
a bib in author-year-style

Herbert


What would be the next best numeric style to spbasic ?


there is no best, it is the default  style "numeric" with changing \cite
to footnotes.



You can try "style=nature"   instead of footnotes



sorry, read "instead of numeric"

Herbert
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Re: biblatex-spbasic

2022-03-14 Thread Herbert Voss via lyx-users



Am 14.03.22 um 07:58 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:53 schrieb Wolfgang Engelmann via lyx-users:



Am 14.03.22 um 07:51 schrieb Herbert Voss via lyx-users:

Am 14.03.22 um 07:47 schrieb Wolfgang Engelmann via lyx-users:




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and 
bib as usual.


Herbert


I meant ONLY the ^7, WITHOUT the footnote


then you also need a bibliography in numeric style. But spbasic has
a bib in author-year-style

Herbert


What would be the next best numeric style to spbasic ?


there is no best, it is the default  style "numeric" with changing \cite
to footnotes.



You can try "style=nature"   instead of footnotes
It is the style from the "nature" journal.

Herbert
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Re: biblatex-spbasic

2022-03-14 Thread Herbert Voss via lyx-users



Am 14.03.22 um 07:53 schrieb Wolfgang Engelmann via lyx-users:



Am 14.03.22 um 07:51 schrieb Herbert Voss via lyx-users:

Am 14.03.22 um 07:47 schrieb Wolfgang Engelmann via lyx-users:




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and bib 
as usual.


Herbert


I meant ONLY the ^7, WITHOUT the footnote


then you also need a bibliography in numeric style. But spbasic has
a bib in author-year-style

Herbert


What would be the next best numeric style to spbasic ?


there is no best, it is the default  style "numeric" with changing \cite
to footnotes.

Herbert
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Re: biblatex-spbasic

2022-03-14 Thread Wolfgang Engelmann via lyx-users




Am 14.03.22 um 07:51 schrieb Herbert Voss via lyx-users:

Am 14.03.22 um 07:47 schrieb Wolfgang Engelmann via lyx-users:




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and bib 
as usual.


Herbert


I meant ONLY the ^7, WITHOUT the footnote


then you also need a bibliography in numeric style. But spbasic has
a bib in author-year-style

Herbert


What would be the next best numeric style to spbasic ?

Wolfgang
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Re: biblatex-spbasic

2022-03-14 Thread Herbert Voss via lyx-users

Am 14.03.22 um 07:47 schrieb Wolfgang Engelmann via lyx-users:




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and bib 
as usual.


Herbert


I meant ONLY the ^7, WITHOUT the footnote


then you also need a bibliography in numeric style. But spbasic has
a bib in author-year-style

Herbert
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Re: biblatex-spbasic

2022-03-14 Thread Wolfgang Engelmann via lyx-users



Am 14.03.22 um 07:42 schrieb Herbert Voss via lyx-users:



Am 14.03.22 um 07:37 schrieb Wolfgang Engelmann via lyx-users:



Am 13.03.22 um 07:41 schrieb Herbert Voss via lyx-users:



Am 12.03.22 um 17:53 schrieb Wolfgang Engelmann via lyx-users:
I would like to use biblatex-spbasic for the literature citations 
and the Bibliography.


I have selected the style in Document Settings>Bibliography.

However, I would like to have a superscript number instead of the 
names/years in the document. The output in the Bibliography should 
be as before.



Do you mean \footcite and /or \footfullcite  ??   If yes, see 
documentation.


Herbert




Is this possible already or do I have to wait until somebody is kind 
enough to create it?


The reason is, that I have a large amount of citations in the 
document and reading the text would be less fluent if the names/year 
is given instead of just a superscript.




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and bib as 
usual.


Herbert


I meant ONLY the ^7, WITHOUT the footnote
Wolfgang
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Re: biblatex-spbasic

2022-03-14 Thread Herbert Voss via lyx-users



Am 14.03.22 um 07:37 schrieb Wolfgang Engelmann via lyx-users:



Am 13.03.22 um 07:41 schrieb Herbert Voss via lyx-users:



Am 12.03.22 um 17:53 schrieb Wolfgang Engelmann via lyx-users:
I would like to use biblatex-spbasic for the literature citations 
and the Bibliography.


I have selected the style in Document Settings>Bibliography.

However, I would like to have a superscript number instead of the 
names/years in the document. The output in the Bibliography should 
be as before.



Do you mean \footcite and /or \footfullcite  ??   If yes, see 
documentation.


Herbert




Is this possible already or do I have to wait until somebody is kind 
enough to create it?


The reason is, that I have a large amount of citations in the 
document and reading the text would be less fluent if the names/year 
is given instead of just a superscript.




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...



This _is_ \footcite{key} with a short reference as footnote and bib as 
usual.


Herbert

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Re: biblatex-spbasic

2022-03-14 Thread Wolfgang Engelmann via lyx-users



Am 13.03.22 um 07:41 schrieb Herbert Voss via lyx-users:



Am 12.03.22 um 17:53 schrieb Wolfgang Engelmann via lyx-users:
I would like to use biblatex-spbasic for the literature citations and 
the Bibliography.


I have selected the style in Document Settings>Bibliography.

However, I would like to have a superscript number instead of the 
names/years in the document. The output in the Bibliography should be 
as before.



Do you mean \footcite and /or \footfullcite  ??   If yes, see 
documentation.


Herbert




Is this possible already or do I have to wait until somebody is kind 
enough to create it?


The reason is, that I have a large amount of citations in the document 
and reading the text would be less fluent if the names/year is given 
instead of just a superscript.




Example:
was shown by Muller^7 and ...
The Bibliography shows the full reference Muller...
Wolfgang
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Re: biblatex-spbasic

2022-03-12 Thread Herbert Voss via lyx-users



Am 12.03.22 um 17:53 schrieb Wolfgang Engelmann via lyx-users:
I would like to use biblatex-spbasic for the literature citations and 
the Bibliography.


I have selected the style in Document Settings>Bibliography.

However, I would like to have a superscript number instead of the 
names/years in the document. The output in the Bibliography should be 
as before.



Do you mean \footcite and /or \footfullcite  ??   If yes, see documentation.

Herbert




Is this possible already or do I have to wait until somebody is kind 
enough to create it?


The reason is, that I have a large amount of citations in the document 
and reading the text would be less fluent if the names/year is given 
instead of just a superscript.


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biblatex-spbasic

2022-03-12 Thread Wolfgang Engelmann via lyx-users
I would like to use biblatex-spbasic for the literature citations and 
the Bibliography.


I have selected the style in Document Settings>Bibliography.

However, I would like to have a superscript number instead of the 
names/years in the document. The output in the Bibliography should be as 
before.


Is this possible already or do I have to wait until somebody is kind 
enough to create it?


The reason is, that I have a large amount of citations in the document 
and reading the text would be less fluent if the names/year is given 
instead of just a superscript.


Wolfgang

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Re: biblatex error. Can't get correct pdf output

2022-01-08 Thread Wolfgang Engelmann via lyx-users




On 08.01.22 12:09, Herbert Voss via lyx-users wrote:



There is the key missing, for example

@InBook{Ding2019,
...

btw: do not attached the biblatex-spbasic, it is already part of
TeXLive and MiKTeX.

Herbert



Heureka!

How stupid I missed it. Adding the key solved things, and now the pdf of 
the book to which the bibliography belongs is also outputted.

Would be nice to know how one could find out from the log file whats wrong.
Thanks a lot, Herbert.

Wolfgang
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Re: biblatex error. Can't get correct pdf output

2022-01-08 Thread Herbert Voss via lyx-users

Am 08.01.22 um 12:01 schrieb Wolfgang Engelmann via lyx-users:

However:
A08-TEST.lyx
with SP-WITTE-2022.bib
does not show the references in the bibliography and the one in the 
text is bold, not blue


These are the errors/warnings:
Biber error: BibTeX subsystem: 
/tmp/biber_tmp_tYGf/d7dc170ec507816e85d64326c042e07e_5570.utf8, line 
2837, syntax error: found ",", expected one of: number, name (entry 
type, key, field, or macro name), end of entry ("}" or ")") or quoted 
string ({...} or "...")


and descripition of error:
[6143] Utils.pm:411> ERROR - BibTeX subsystem: 
/tmp/biber_tmp_tYGf/d7dc170ec507816e85d64326c042e07e_5570.utf8, line 
2837, syntax error: found ",", expected one of: number, name (entry 
type, key, field, or macro name), end of entry ("}" or ")") or quoted 
string ({...} or "...")


Wolfgang,
the error message says it all:  Line 2837 of the bib file is a problem 
or at least the line

where something is detected as wrong. And in that line biber found a comma
but expected a number or name to read ...

Line 2837 is:

@InBook{,
...


There is the key missing, for example

@InBook{Ding2019,
...

btw: do not attached the biblatex-spbasic, it is already part of
TeXLive and MiKTeX.

Herbert


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Re: biblatex warning

2021-12-22 Thread Herbert Voss via lyx-users



Am 22.12.21 um 10:50 schrieb Wolfgang Engelmann via lyx-users:

What does
Package biblatex Warning: Macro 'note+pages' already defined.
mean?


Instead of \renewbibmacro there is a \newbibmacro in spbasic.bbx
Will be fixed, but already doesn't hurt.



These are the surrounding messages:

Package biblatex Info: Delimiter 'nametitledelim' in context 'bib' 
already defined, overwriting.
Package biblatex Info: Delimiter 'nametitledelim' in context 'biblist' 
already defined, overwriting.
Package biblatex Info: Delimiter 'finalnamedelim' in context '' 
already defined, overwriting.


Only infos that spbasic.bbx redefines existing delimiters.


Herbert




Package biblatex Warning: Macro 'note+pages' already defined.
(biblatex)    Using \renewbibmacro.

)
Package biblatex Info: Trying to load citation style 
'biblatex-spbasic'...

Package biblatex Info: ... file 'biblatex-spbasic.cbx' found.

Wolfgang


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biblatex warning

2021-12-22 Thread Wolfgang Engelmann via lyx-users

What does
Package biblatex Warning: Macro 'note+pages' already defined.
mean?

These are the surrounding messages:

Package biblatex Info: Delimiter 'nametitledelim' in context 'bib' 
already defined, overwriting.
Package biblatex Info: Delimiter 'nametitledelim' in context 'biblist' 
already defined, overwriting.
Package biblatex Info: Delimiter 'finalnamedelim' in context '' already 
defined, overwriting.


Package biblatex Warning: Macro 'note+pages' already defined.
(biblatex)Using \renewbibmacro.

)
Package biblatex Info: Trying to load citation style 'biblatex-spbasic'...
Package biblatex Info: ... file 'biblatex-spbasic.cbx' found.

Wolfgang
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Re: texlive and biblatex-spbasic

2021-12-20 Thread Herbert Voss via lyx-users



Am 20.12.21 um 19:20 schrieb Kornel Benko via lyx-users:

Am Mon, 20 Dec 2021 19:17:49 +0100
schrieb Wolfgang Engelmann via lyx-users :


Am 20.12.21 um 18:18 schrieb Herbert Voss via lyx-users:

Thanks, Herbert, for your help. One more question for chmod which did
not work:

   And if you do not run the tlmgr as root

then you do not need it for texhash. I prefer always user permissions for
texlive. The reason why I did after installtion of texlive:

sudo chmod -R voss:voss /usr/local/texlive
   

sudo chmod -R wolfgang:wolfgang /usr/local/texlive/
chmod: Ungültiger Modus: „wolfgang:wolfgang“
„chmod --help“ liefert weitere Informationen.

sudo chmod -R wolfgang /usr/local/texlive/
chmod: Ungültiger Modus: „wolfgang“

   who am i
wolfgang pts/22021-12-20 18:52 (:0)

who
wolfgang tty7 2021-12-20 10:16 (:0)
wolfgang pts/02021-12-20 10:16 (:0)
wolfgang pts/22021-12-20 18:52 (:0)
wolfgang pts/32021-12-20 10:16 (:0)

I do not know what would replace voss:voss in my case.

Wolfgang


You meant 'chown' probably.



Uh, yes!
Sorry Wolfgang and thanks Kornel

sudo chown -R voss:voss /usr/local/texlive



Herbert
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Re: texlive and biblatex-spbasic

2021-12-20 Thread Kornel Benko via lyx-users
Am Mon, 20 Dec 2021 19:17:49 +0100
schrieb Wolfgang Engelmann via lyx-users :

> Am 20.12.21 um 18:18 schrieb Herbert Voss via lyx-users:
> 
> Thanks, Herbert, for your help. One more question for chmod which did
> not work:
> 
>   And if you do not run the tlmgr as root
> > then you do not need it for texhash. I prefer always user permissions for
> > texlive. The reason why I did after installtion of texlive:
> > 
> > sudo chmod -R voss:voss /usr/local/texlive
> >   
> sudo chmod -R wolfgang:wolfgang /usr/local/texlive/
> chmod: Ungültiger Modus: „wolfgang:wolfgang“
> „chmod --help“ liefert weitere Informationen.
> 
> sudo chmod -R wolfgang /usr/local/texlive/
> chmod: Ungültiger Modus: „wolfgang“
> 
>   who am i
> wolfgang pts/22021-12-20 18:52 (:0)
> 
> who
> wolfgang tty7 2021-12-20 10:16 (:0)
> wolfgang pts/02021-12-20 10:16 (:0)
> wolfgang pts/22021-12-20 18:52 (:0)
> wolfgang pts/32021-12-20 10:16 (:0)
> 
> I do not know what would replace voss:voss in my case.
> 
> Wolfgang
> 

You meant 'chown' probably.

Kornel


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Re: texlive and biblatex-spbasic

2021-12-20 Thread Wolfgang Engelmann via lyx-users



Am 20.12.21 um 18:18 schrieb Herbert Voss via lyx-users:

Thanks, Herbert, for your help. One more question for chmod which did
not work:

 And if you do not run the tlmgr as root

then you do not need it for texhash. I prefer always user permissions for
texlive. The reason why I did after installtion of texlive:

sudo chmod -R voss:voss /usr/local/texlive


sudo chmod -R wolfgang:wolfgang /usr/local/texlive/
chmod: Ungültiger Modus: „wolfgang:wolfgang“
„chmod --help“ liefert weitere Informationen.

sudo chmod -R wolfgang /usr/local/texlive/
chmod: Ungültiger Modus: „wolfgang“

 who am i
wolfgang pts/22021-12-20 18:52 (:0)

who
wolfgang tty7 2021-12-20 10:16 (:0)
wolfgang pts/02021-12-20 10:16 (:0)
wolfgang pts/22021-12-20 18:52 (:0)
wolfgang pts/32021-12-20 10:16 (:0)

I do not know what would replace voss:voss in my case.

Wolfgang

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Re: texlive and biblatex-spbasic

2021-12-20 Thread Herbert Voss via lyx-users



Am 20.12.21 um 17:49 schrieb Wolfgang Engelmann via lyx-users:
I would like to better understand the tree(s) for texlive and what 
texhash and tlmgr do


The important points are found behind the  at the end of the mail.

Thanks a lot

Wolfgang

Your installed tlmgr will notice and ask you to update it before 
updating anything else. The command to do this is: tlmgr update --self 
After any updates of tlmgr, you can then run, for instance, tlmgr 
update --all, which will update (including additions and removals) all 
other packages in your installation that have been changed on the server.


sudo tlmgr update --self
[sudo] Passwort für wolfgang:
tlmgr: package repository 
https://ftp.tu-chemnitz.de/pub/tex/systems/texlive/tlnet (verified)

tlmgr: saving backups to /usr/local/texlive/2021/tlpkg/backups
tlmgr: no self-updates for tlmgr available

tlmgr update --all



Wolfgang,

you can run

tlmgr --self --all update

then you do not need two  comamnds



sudo texhash


that is already done my tlmgr.  And if you do not run the tlmgr as root
then you do not need it for texhash. I prefer always user permissions for
texlive. The reason why I did after installtion of texlive:

sudo chmod -R voss:voss /usr/local/texlive

then everything in this directors has user permission! And I never
need sudo to run texhash or tlmgr or 



wolfgang@Fuji:~$ find -iname 'texmf*'
./.texlive2020/texmf-var
./.texlive2016/texmf-var
./TEXMF-Sicherung
./TEXMF-Sicherung/texmf
./.texlive2019/texmf-var
./texmf
./.texlive2021/texmf-var

wolfgang@Fuji:/$ sudo find -iname 'texmf*'
./root/.texlive2020/texmf-var


this is always created if you install texlive as root and running
tlmgr also as root.

If you want to see which package is used, run

kpsewhich biblatex-spbasic.sty

then you'll get what TeX will find first and using. With

kpsewhich --all biblatex-spbasic.sty

you'll get all files in the TeX dirextory structure.


wolfgang@Fuji:/usr/local/texlive/texmf-local$ ls -l
insgesamt 52
-rw-r--r-- 1 wolfgang wolfgang 1943 15. Dez 15:02 biblatex-spbasic.bbx
-rw-r--r-- 1 wolfgang wolfgang 2601 15. Dez 15:02 biblatex-spbasic.cbx
-rw-rw-rw- 1 root staff    1578 10. Jul 20:01 
biblatex-spbasic-old.bbx
-rw-r--r-- 1 root staff 295 10. Jul 20:06 
biblatex-spbasic-old.cbx


 Questions:
How do I make sure the new version is used?


first the current directory is searched, then an existing texmf directory,
then the texmf-local directory, then the main texmf-dist/...


Should I remove the older biblatex-spbasic?


rename the old files to for example:

biblatex-spbasic.bbx.20211212


How do I tell lyx to use the new version?



It will be used automatically if you rename the old files.

Herbert


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texlive and biblatex-spbasic

2021-12-20 Thread Wolfgang Engelmann via lyx-users
I would like to better understand the tree(s) for texlive and what 
texhash and tlmgr do


The important points are found behind the  at the end of the mail.

Thanks a lot

Wolfgang

Your installed tlmgr will notice and ask you to update it before 
updating anything else. The command to do this is: tlmgr update --self 
After any updates of tlmgr, you can then run, for instance, tlmgr update 
--all, which will update (including additions and removals) all other 
packages in your installation that have been changed on the server.


sudo tlmgr update --self
[sudo] Passwort für wolfgang:
tlmgr: package repository 
https://ftp.tu-chemnitz.de/pub/tex/systems/texlive/tlnet (verified)

tlmgr: saving backups to /usr/local/texlive/2021/tlpkg/backups
tlmgr: no self-updates for tlmgr available

tlmgr update --all

tlmgr: saving backups to /usr/local/texlive/2021/tlpkg/backups
[ 1/69] auto-remove: pst-ghsb ... done
[ 2/69, ??:??/??:??] update: acmart [3572k] (60608 -> 61233) ... done
[ 3/69, 00:01/00:34] update: algpseudocodex [350k] (56125 -> 61230) ... done
[ 4/69, 00:03/01:34] update: arara [12457k] (61086 -> 61305) ... done

and a lot of updates ...

sudo texhash
texhash: Updating /usr/local/texlive/2021/texmf-config/ls-R...
texhash: Updating /usr/local/texlive/2021/texmf-dist/ls-R...
texhash: Updating /usr/local/texlive/2021/texmf-var/ls-R...
texhash: Updating /usr/local/texlive/texmf-local/ls-R...
texhash: Done.


wolfgang@Fuji:~$ find -iname 'texmf*'
./.texlive2020/texmf-var
./.texlive2016/texmf-var
./TEXMF-Sicherung
./TEXMF-Sicherung/texmf
./.texlive2019/texmf-var
./texmf
./.texlive2021/texmf-var

wolfgang@Fuji:/$ sudo find -iname 'texmf*'
./root/.texlive2020/texmf-var
./var/lib/dpkg/triggers/texmf-hyphen
./var/lib/dpkg/triggers/texmf-map
./var/lib/dpkg/triggers/texmf-format
./var/lib/texmf
./var/lib/tex-common/fmtutil-cnf/texmf
./var/lib/tex-common/fontmap-cfg/texmf
./home/wolfgang/.texlive2020/texmf-var
./home/wolfgang/.texlive2016/texmf-var
./home/wolfgang/TEXMF-Sicherung
./home/wolfgang/TEXMF-Sicherung/texmf
./home/wolfgang/.texlive2019/texmf-var
./home/wolfgang/texmf
./home/wolfgang/.texlive2021/texmf-var
./usr/local/share/man/man1/texmfstart.1
./usr/local/share/man/man1/texmfstart.man1.pdf
./usr/local/share/texmf
./usr/local/bin/texmfstart
./usr/local/texlive/2021/texmf.cnf
./usr/local/texlive/2021/texmf-var
./usr/local/texlive/2021/texmf-local
./usr/local/texlive/2021/texmf-config
./usr/local/texlive/2021/bin/x86_64-linux/texmfstart
./usr/local/texlive/2021/texmf-dist
./usr/local/texlive/2021/texmf-dist/web2c/texmf.cnf
./usr/local/texlive/2021/texmf-dist/web2c/texmfcnf.lua
./usr/local/texlive/2021/texmf-dist/doc/context/scripts/mkii/texmfstart.man
./usr/local/texlive/2021/texmf-dist/doc/context/scripts/mkii/texmfstart.html
./usr/local/texlive/2021/texmf-dist/doc/context/scripts/mkii/texmfstart.xml
./usr/local/texlive/2021/texmf-dist/doc/man/man1/texmfstart.1
./usr/local/texlive/2021/texmf-dist/doc/man/man1/texmfstart.man1.pdf
./usr/local/texlive/2021/texmf-dist/scripts/context/stubs/win64/texmfstart.exe
./usr/local/texlive/2021/texmf-dist/scripts/context/stubs/unix/texmfstart
./usr/local/texlive/2021/texmf-dist/scripts/context/stubs/mswin/texmfstart.exe
./usr/local/texlive/2021/texmf-dist/scripts/context/ruby/texmfstart.rb
./usr/local/texlive/2021/texmfcnf.lua
./usr/local/texlive/texmf-local
./usr/share/vim/vim82/syntax/texmf.vim
./usr/share/R/share/texmf
./usr/share/man/man1/texmfstart.1.gz
./usr/share/texmf
./usr/share/texmf/web2c/texmf.cnf
./usr/share/texmf/web2c/texmfcnf.lua
./usr/share/texmf/doc/context/scripts/mkii/texmfstart.man
./usr/share/texmf/doc/context/scripts/mkii/texmfstart.html
./usr/share/texmf/doc/context/scripts/mkii/texmfstart.xml
./usr/share/texmf/doc/man/man1/texmfstart.1
./usr/share/texmf/doc/man/man1/texmfstart.man1.pdf
./usr/share/texmf/scripts/context/ruby/texmfstart.rb
./usr/share/texlive/texmf-dist
./usr/share/texlive/texmf-dist/web2c/texmf.cnf
./usr/share/texlive/texmf-dist/web2c/texmfcnf.lua
./usr/bin/texmfstart
./etc/texmf
./etc/texmf/web2c/texmf.cnf
./etc/texmf/texmf.d


wolfgang@Fuji:/usr/local/texlive$ ls
2021  texmf-local


wolfgang@Fuji:/usr/local/texlive/texmf-local$ ls
biblatex-spbasic.bbx  bibtex  ls-R      web2c
biblatex-spbasic.cbx  doc metapost
biblatex-spbasic-old.bbx  dvips   tex
biblatex-spbasic-old.cbx  fonts   tlpkg
ls
biblatex-spbasic.bbx  biblatex-spbasic-old.cbx  dvips  metapost  web2c
biblatex-spbasic.cbx  bibtexfonts  tex
biblatex-spbasic-old.bbx  doc   ls-R   tlpkg


wolfgang@Fuji:/usr/local/texlive/2021$ ls
bin LICENSE.CTAN README.usergroupstexmf-dist
doc.htmlLICENSE.TL   release-texlive.txt  texmf-local
index.html  README   texmf.cnftexmf-var
install-tl  readme-html.dir  texmfcnf.lua tlpkg
install-tl.log  readme-txt.dir   texmf-config


wolfgang@Fuji:/usr/local/texlive/2021$ ls
bin install-tl.lo

SOLVED polyglossia loaded after biblatex

2021-12-08 Thread Wolfgang Engelmann



Am 08.12.21 um 10:19 schrieb Jürgen Spitzmüller:

Am Mittwoch, dem 08.12.2021 um 10:07 +0100 schrieb Wolfgang Engelmann:

You mean, I should take this away from the USER preamblel?
\usepackage[english]{babel}


Yes. LyX loads babel automatically (unless you selected Language
package "none" in Language settings, which you shouldn't without good
reasons).


and this should also be taken off?
  >> \usepackage[style=biblatex-spbasic]{biblatex}


Yes. Load biblatex in Document > Settings > Bibliography. You can also
set the spbasic style there.

Jürgen



Thanks, Jürgen,

taking out #

\usepackage[english]{babel}
\usepackage[style=biblatex-spbasic]{biblatex}
from the User preamble

solved the issue

Wolfgang
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Re: polyglossia loaded after biblatex

2021-12-08 Thread Jürgen Spitzmüller
Am Mittwoch, dem 08.12.2021 um 10:07 +0100 schrieb Wolfgang Engelmann:
> You mean, I should take this away from the USER preamblel?
> \usepackage[english]{babel}

Yes. LyX loads babel automatically (unless you selected Language
package "none" in Language settings, which you shouldn't without good
reasons).

> and this should also be taken off?
>  >> \usepackage[style=biblatex-spbasic]{biblatex}

Yes. Load biblatex in Document > Settings > Bibliography. You can also
set the spbasic style there.

Jürgen



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Re: polyglossia loaded after biblatex

2021-12-08 Thread Wolfgang Engelmann



Am 08.12.21 um 09:57 schrieb Jürgen Spitzmüller:

Am Mittwoch, dem 08.12.2021 um 08:58 +0100 schrieb Wolfgang Engelmann:

My preamble:

\usepackage[utf8]{inputenc}
\usepackage[english]{babel}
%%\setmainlanguage{english}
%\usepackage{biblatex}
%biblatex-spbasic Herbert Voss
\usepackage{xurl}
\usepackage[style=biblatex-spbasic]{biblatex}
\usepackage{libertinus-otf}}
 more without relevance to the question


This is your USER preamble (Document > Settings > LaTeX preamble)? Why
do you load babel and biblatex manually? And why does LaTeX warn about
polyglossia if you load babel?


You mean, I should take this away from the USER preamblel?
\usepackage[english]{babel}

and this should also be taken off?
>> \usepackage[style=biblatex-spbasic]{biblatex}

Wolfgang


This might be relevant?
from
https://wiki.lyx.org/BibTeX/Biblatex).#toc8
Using Biblatex with polyglossia (XeTeX or LuaTeX with non-TeX fonts)


No, this is old stuff that does not apply to LyX 2.3.

Jürgen



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Re: polyglossia loaded after biblatex

2021-12-08 Thread Jürgen Spitzmüller
Am Mittwoch, dem 08.12.2021 um 08:58 +0100 schrieb Wolfgang Engelmann:
> My preamble:
> 
> \usepackage[utf8]{inputenc}
> \usepackage[english]{babel}
> %%\setmainlanguage{english}
> %\usepackage{biblatex}
> %biblatex-spbasic Herbert Voss
> \usepackage{xurl}
> \usepackage[style=biblatex-spbasic]{biblatex}
> \usepackage{libertinus-otf}}
>  more without relevance to the question

This is your USER preamble (Document > Settings > LaTeX preamble)? Why
do you load babel and biblatex manually? And why does LaTeX warn about
polyglossia if you load babel?

> This might be relevant?
> from
> https://wiki.lyx.org/BibTeX/Biblatex).#toc8
> Using Biblatex with polyglossia (XeTeX or LuaTeX with non-TeX fonts)

No, this is old stuff that does not apply to LyX 2.3.

Jürgen



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Re: polyglossia loaded after biblatex

2021-12-07 Thread Wolfgang Engelmann



Am 08.12.21 um 08:25 schrieb Jürgen Spitzmüller:

Am Mittwoch, dem 08.12.2021 um 07:47 +0100 schrieb Wolfgang Engelmann:

Hi,
i get an error
! Package biblatex Error: 'polyglossia' loaded after biblatex.

However, in the tex file it comes BEFORE the biblatex

\usepackage{color}
\definecolor{fg}{rgb}{0.00,0.00,0.00}
\definecolor{bg}{rgb}{0.980392,0.941176,0.901961}
\pagecolor{bg}
\usepackage{polyglossia}
\setdefaultlanguage[variant=british]{english}
\usepackage[style=biblatex-spbasic]{biblatex}
\def\lyxlock{}

I am not sure were in the LyX file polyglossia is set;
should be another name.

I use Komascript book style, Debian, Lyx 2.4.0 dev

Question: Were in the lyx file can I correct the error?


Do you load biblatex, or polyglossia, manually in the preamble? LyX
should load the two packages in the correct order.

Jürgen



My preamble:

\usepackage[utf8]{inputenc}
\usepackage[english]{babel}
%%\setmainlanguage{english}
%\usepackage{biblatex}
%biblatex-spbasic Herbert Voss
\usepackage{xurl}
\usepackage[style=biblatex-spbasic]{biblatex}
\usepackage{libertinus-otf}}
 more without relevance to the question

 Do you need also the selected stuff in the DOCUMENTS?

This might be relevant?
from
https://wiki.lyx.org/BibTeX/Biblatex).#toc8
Using Biblatex with polyglossia (XeTeX or LuaTeX with non-TeX fonts)

If you use the polyglossia language package, you will need to manually 
load the polyglossia package and set the default language manually in 
the preamble just before the \usepackage of biblatex, as follows:

\usepackage{polyglossia}
\setdefaultlanguage{english}
Substitute english with the main language of your document.

Thanks
Wolfgang
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Re: polyglossia loaded after biblatex

2021-12-07 Thread Jürgen Spitzmüller
Am Mittwoch, dem 08.12.2021 um 07:47 +0100 schrieb Wolfgang Engelmann:
> Hi,
> i get an error
> ! Package biblatex Error: 'polyglossia' loaded after biblatex.
> 
> However, in the tex file it comes BEFORE the biblatex
> 
> \usepackage{color}
> \definecolor{fg}{rgb}{0.00,0.00,0.00}
> \definecolor{bg}{rgb}{0.980392,0.941176,0.901961}
> \pagecolor{bg}
> \usepackage{polyglossia}
> \setdefaultlanguage[variant=british]{english}
> \usepackage[style=biblatex-spbasic]{biblatex}
> \def\lyxlock{}
> 
> I am not sure were in the LyX file polyglossia is set;
> should be another name.
> 
> I use Komascript book style, Debian, Lyx 2.4.0 dev
> 
> Question: Were in the lyx file can I correct the error?

Do you load biblatex, or polyglossia, manually in the preamble? LyX
should load the two packages in the correct order.

Jürgen

> 
> Wolfgang



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polyglossia loaded after biblatex

2021-12-07 Thread Wolfgang Engelmann

Hi,
i get an error
! Package biblatex Error: 'polyglossia' loaded after biblatex.

However, in the tex file it comes BEFORE the biblatex

\usepackage{color}
\definecolor{fg}{rgb}{0.00,0.00,0.00}
\definecolor{bg}{rgb}{0.980392,0.941176,0.901961}
\pagecolor{bg}
\usepackage{polyglossia}
\setdefaultlanguage[variant=british]{english}
\usepackage[style=biblatex-spbasic]{biblatex}
\def\lyxlock{}

I am not sure were in the LyX file polyglossia is set;
should be another name.

I use Komascript book style, Debian, Lyx 2.4.0 dev

Question: Were in the lyx file can I correct the error?

Wolfgang
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Re: Biblatex missing characters in Libertinus

2021-12-03 Thread Herbert Voss

Am 04.12.21 um 08:47 schrieb Wolfgang Engelmann:


Good news:
After commenting out

\usepackage[utf8]{inputenc}


That is the default since 2019 and not needed for lualatex/xelatex



%\usepackage[T1]{fontenc}
%\usepackage[english]{babel}
%\usepackage{biblatex}

in the preamble the Polyglossia errors were gone.
The references in the text are shown, the Bibliography is ok.

There are still errors concerning special characters such as:

Missing character: There is no œ (U+009C) in font 
[LibertinusSerif-Regular.otf]
Missing character: There is no 푆 (U+1D446) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no 푊 (U+1D44A) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no 푐 (U+1D450) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no 푐 (U+1D450) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no 푚 (U+1D45A) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no ▴ (U+25B4) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!Missing 
character: There is no 푥 (U+1D465) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!





I uppose that you do not used the math mode for 푆  and the other ones



I guess  I have to load more of the Libertinus- and Stixt stuff.
I have at the moment:

\usepackage{libertinus}
\usepackage{libertinus-otf}


only one is enough; libertinus loads itself the otf variant


\setmonofont[Scale=MatchLowercase,FakeStretch=0.88,Ligatures=ResetAll]{AnonymousPro} 


\usepackage{libertinusSerif-Regular.otf}



that is wrong and should be deleted.


\setmathfont{STIX2Math.otf}
\setmathfont{STIXTwoMath-Regular.otf}
\setmathfont{STIXTwoText-Italic.otf}




only the second one makes sense, the other ones should be deleted.

\setmathfont{STIXTwoMath-Regular.otf}



which should probably be corrected


Herbert
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Re: Biblatex missing characters in Libertinus

2021-12-03 Thread Wolfgang Engelmann



Am 03.12.21 um 19:57 schrieb Wolfgang Engelmann:



Am 03.12.21 um 12:11 schrieb Kees Zeelenberg (kzStats):

-Oorspronkelijk bericht-
Van: lyx-users  Namens Wolfgang 
Engelmann

Verzonden: vrijdag 3 december 2021 11:13
Aan: lyx-users@lists.lyx.org
Onderwerp: Re: Biblatex missing characters in Libertinus

Ups,
here the log file, the first one was empty.
Wolfgang


The latest stix2fonts seem to be called STIXTwootf, so with "Two" 
instead of "2", and have suffixes (Regular, etc).  With 
\setmathfont{STIXTwoMath-Regular.otf} in the preamble, the LyX-file 
compiles well and shows the correct pdf output, whereas with 
\setmathfont{STIX2Math.otf} it fails.


Kees



It is now better working after changing to STIXTwoMath-Regular.otf
\usepackage{libertinus}
%\setmathfont{STIX2Math.otf}
\setmathfont{STIXTwoMath-Regular.otf}

I added also
\setmathfont{STIXTwoMath-Italic.otf}

There is an error
no (U+009C) In Libertinus Serif-Regular.otf
and
no (U+1D446) In [STIXTwo-Italic.otf]:m

There is another error:
  Taken verbatim from babel files (2019/09/27 v3.34)

This error is a problem for me:
I don't know were Polyglossia was loaded after biblatex. I don't have it 
in the Document>settings>Latex Preamble.



Package polyglossia Info: Making " an active character on input line 177.
)
Package csquotes Info: Checking for multilingual support...
Package csquotes Info: ... found 'polyglossia' package.

! Package biblatex Error: 'polyglossia' loaded after biblatex.

See the biblatex package documentation for explanation

At least I am getting now a pdf with>
Show Output Anyway
But the Bibliograpy is not shown and the references in the text are all 
in Bold

I set Bibliography in TOC, which does not show up.

Wolfgang


Good news:
After commenting out

\usepackage[utf8]{inputenc}
%\usepackage[T1]{fontenc}
%\usepackage[english]{babel}
%\usepackage{biblatex}

in the preamble the Polyglossia errors were gone.
The references in the text are shown, the Bibliography is ok.

There are still errors concerning special characters such as:

Missing character: There is no œ (U+009C) in font 
[LibertinusSerif-Regular.otf]
Missing character: There is no 푆 (U+1D446) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no 푊 (U+1D44A) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no 푐 (U+1D450) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no 푐 (U+1D450) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no 푚 (U+1D45A) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!
Missing character: There is no ▴ (U+25B4) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!Missing 
character: There is no 푥 (U+1D465) in font 
[STIXTwoText-Italic.otf]:mode=base;script=latn;language=dflt;!


I guess  I have to load more of the Libertinus- and Stixt stuff.
I have at the moment:

\usepackage{libertinus}
\usepackage{libertinus-otf}
\setmonofont[Scale=MatchLowercase,FakeStretch=0.88,Ligatures=ResetAll]{AnonymousPro} 


\usepackage{libertinusSerif-Regular.otf}
\setmathfont{STIX2Math.otf}
\setmathfont{STIXTwoMath-Regular.otf}
\setmathfont{STIXTwoText-Italic.otf}

which should probably be corrected

Thanks all who helped!

Wolfgang
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Re: Biblatex missing characters in Libertinus

2021-12-03 Thread Wolfgang Engelmann




Am 03.12.21 um 12:11 schrieb Kees Zeelenberg (kzStats):

-Oorspronkelijk bericht-
Van: lyx-users  Namens Wolfgang Engelmann
Verzonden: vrijdag 3 december 2021 11:13
Aan: lyx-users@lists.lyx.org
Onderwerp: Re: Biblatex missing characters in Libertinus

Ups,
here the log file, the first one was empty.
Wolfgang


The latest stix2fonts seem to be called STIXTwootf, so with "Two" instead of 
"2", and have suffixes (Regular, etc).  With \setmathfont{STIXTwoMath-Regular.otf} in the 
preamble, the LyX-file compiles well and shows the correct pdf output, whereas with 
\setmathfont{STIX2Math.otf} it fails.

Kees



It is now better working after changing to STIXTwoMath-Regular.otf
\usepackage{libertinus}
%\setmathfont{STIX2Math.otf}
\setmathfont{STIXTwoMath-Regular.otf}

I added also
\setmathfont{STIXTwoMath-Italic.otf}

There is an error
no (U+009C) In Libertinus Serif-Regular.otf
and
no (U+1D446) In [STIXTwo-Italic.otf]:m

There is another error:
 Taken verbatim from babel files (2019/09/27 v3.34)

This error is a problem for me:
I don't know were Polyglossia was loaded after biblatex. I don't have it 
in the Document>settings>Latex Preamble.



Package polyglossia Info: Making " an active character on input line 177.
)
Package csquotes Info: Checking for multilingual support...
Package csquotes Info: ... found 'polyglossia' package.

! Package biblatex Error: 'polyglossia' loaded after biblatex.

See the biblatex package documentation for explanation

At least I am getting now a pdf with>
Show Output Anyway
But the Bibliograpy is not shown and the references in the text are all 
in Bold

I set Bibliography in TOC, which does not show up.

Wolfgang
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RE: Biblatex missing characters in Libertinus

2021-12-03 Thread Kees Zeelenberg (kzStats)
> -Oorspronkelijk bericht-
> Van: lyx-users  Namens Wolfgang Engelmann
> Verzonden: vrijdag 3 december 2021 11:13
> Aan: lyx-users@lists.lyx.org
> Onderwerp: Re: Biblatex missing characters in Libertinus
> 
> Ups,
> here the log file, the first one was empty.
> Wolfgang

The latest stix2fonts seem to be called STIXTwootf, so with "Two" instead 
of "2", and have suffixes (Regular, etc).  With 
\setmathfont{STIXTwoMath-Regular.otf} in the preamble, the LyX-file compiles 
well and shows the correct pdf output, whereas with \setmathfont{STIX2Math.otf} 
it fails.

Kees


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Re: Biblatex missing characters in Libertinus

2021-12-03 Thread Wolfgang Engelmann



Am 03.12.21 um 09:08 schrieb Herbert Voss:

Am 03.12.21 um 08:53 schrieb Wolfgang Engelmann:



Thankful for any indication what I could try,



Run

luaotfload-tool --cache=purge --update -v

which should report _no_ problem. Is it true?

Herbert


At the end it says:
Task completed successfully.

But there where quite a number of outputs such as:

luaotfload | db : Found 7569 font files; 0 new, 0 stale entries.
luaotfload | db : Creating filename map.
luaotfload | db : Conflicting basename: "Asana-Math" already indexed in 
category texmf, ignoring.
luaotfload | db : Conflicting barename: "Asana-Math" already indexed in 
category texmf/otf, ignoring.


I reconfigured the lyx file,
but still got

luaotfload | db : Found 7569 font files; 0 new, 0 stale entries.

I am enclosing the lyx log file. Perhaps somebody has an idea whats 
going wrong.


Wolfgang
 
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Re: Biblatex missing characters in Libertinus

2021-12-03 Thread Herbert Voss

Am 03.12.21 um 08:53 schrieb Wolfgang Engelmann:



Thankful for any indication what I could try,



Run

luaotfload-tool --cache=purge --update -v

which should report _no_ problem. Is it true?



Herbert



Wolfgang


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Re: Biblatex missing characters in Libertinus

2021-12-02 Thread Wolfgang Engelmann




Am 02.12.21 um 21:35 schrieb Herbert Voss:

Wolfgang Engelmann schrieb:

ok, Herbert, you are ahead of me and the https://www.lyx.org/
since you are using lyx 2.4
where did you get it?


Ah yes. I had the development version.
Now attached the version for 2.3.6 (original ubuntu)

Herbert


As expected, Herberts test file does not work
The error message:

! Package fontspec Error: The font "STIX2Math" cannot be found.
For immediate help type H .
 ...

l.13

A font might not be found for many reasons.
 Check the spelling, where the font is installed etc. etc.

 When in doubt, ask someone for help!

So I do, what the last sentence says!
---

What I did so far:
I do have the sticks2 fonts, as shown by
/usr/local/texlive/2021/texmf-dist/fonts$ find -iname 'stix2*'
May be, I have to set a PATH to it? How?
---
I put
 PATH=/usr/local/texlive/2021/bin/x86_64-linux:$PATH
in /etc/environment with sudo
The file was empty before. I rebootet and started my lyx file again, but 
get again
luaotfload | db : Reload initiated (formats: otf,ttf,ttc); reason: File 
not found: "STIX2Math.otf".

! Package fontspec Error: The font "STIX2Math" cannot be found.

I tried also /etc/environment.d
but I do not understand its functioning and stopped it
--
same after a reconfigure of the lyx file
-
my LyX version is 2.3.6
and
sudo apt-get install lyx
tells me for my version:
lyx ist schon die neueste Version (2.3.6-1).
0 aktualisiert, 0 neu installiert, 0 zu entfernen und 0 nicht aktualisiert.
-
Thankful for any indication what I could try,

Wolfgang
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Re: Biblatex missing characters in Libertinus

2021-12-02 Thread Herbert Voss
Wolfgang Engelmann schrieb:
> ok, Herbert, you are ahead of me and the https://www.lyx.org/
> since you are using lyx 2.4
> where did you get it?

Ah yes. I had the development version.
Now attached the version for 2.3.6 (original ubuntu)

Herbert

stix2.lyx
Description: application/lyx
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Re: Biblatex missing characters in Libertinus

2021-12-02 Thread Wolfgang Engelmann




Am 02.12.21 um 10:39 schrieb Wolfgang Engelmann:



Am 02.12.21 um 10:18 schrieb Herbert Voss:

Wolfgang Engelmann schrieb:






\usepackage{libertinus}
\setmathfont{STIX2Math.otf}


luaotfload | db : Reload initiated (formats: otf,ttf,ttc); reason: File
not foun
d: "STIX2Math.otf".
! Package fontspec Error: The font "STIX2Math" cannot be found.

I tried also /etc/environment.d
but I do not understand its functioning and stopped it


for font files in official directories you do not need
any path setting. Try the attaches minimal example. It works
under Ubuntu and TeXLive

Herbert


Thanks for the test file. I ran it, but get

/tmp/mozilla_wolfgang0/stix2.lyx is from a newer version of LyX and the 
lyx2lyx script failed to convert it.


my LyX version is 2.3.6
and
sudo apt-get install lyx
tells me for my version:
lyx ist schon die neueste Version (2.3.6-1).
0 aktualisiert, 0 neu installiert, 0 zu entfernen und 0 nicht aktualisiert.

Strange.

Wolfgang


ok, Herbert, you are ahead of me and the https://www.lyx.org/
since you are using lyx 2.4
where did you get it?
Wolfgang
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Re: Biblatex missing characters in Libertinus

2021-12-02 Thread Wolfgang Engelmann



Am 02.12.21 um 09:05 schrieb Wolfgang Engelmann:



Am 02.12.21 um 09:03 schrieb Wolfgang Engelmann:



Am 02.12.21 um 07:51 schrieb Wolfgang Engelmann:



Am 01.12.21 um 20:18 schrieb Herbert Voss:



Am 01.12.21 um 18:36 schrieb Wolfgang Engelmann:




\usepackage{libertinus}
\setmathfont{STIX2Math.otf}



I inserted your
\usepackage{libertinus}
\setmathfont{STIX2Math.otf}

(I had before
\usepackage{libertinus-otf}
\setmonofont[Scale=MatchLowercase,FakeStretch=0.88,Ligatures=ResetAll]{AnonymousPro} 


>the second one in one line, i.e. [...]{AnonymousPro}


that is also ok, libertinus is a wrapper for libertinus-otf and 
libertinus-type1






which gives an error message
! Package fontspec Error: The font "STIX2Math" cannot be found.



it is  part of a full texlive installation.  You can try the file name:

\setmathfont{STIXTwoMath-Regular.otf}

it it doesn't help, then try to install STIXTwo:
https://ctan.org/tex-archive/fonts/stix2-otf?lang=de

Maybe that Ubuntu has an own package for that.

Herbert
Thanks, Herbert


I do have the sticks2 fonts, as shown by

/usr/local/texlive/2021/texmf-dist/fonts$ find -iname 'stix2*'

May be, I have to set a PATH to it? ow?

Wolfgang


I put

  PATH=/usr/local/texlive/2021/bin/x86_64-linux:$PATH
in /etc/environment with sudo

The file was empty before. I rebootet and started my lyx file again, 
but get again


luaotfload | db : Reload initiated (formats: otf,ttf,ttc); reason: 
File not foun

d: "STIX2Math.otf".
! Package fontspec Error: The font "STIX2Math" cannot be found.

I tried also /etc/environment.d
but I do not understand its functioning and stopped it

Wolfgang


same after a reconfigure of the lyx file

Wolfgang


also problems with tlmgr:

sudo tlmgr install stix2math
tlmgr: package repository 
https://mirror.dogado.de/tex-archive/systems/texlive/tlnet (verified)

tlmgr install: package stix2math not present in repository.
tlmgr: action install returned an error; continuing.
tlmgr: An error has occurred. See above messages. Exiting.

Wolfgang
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Re: Biblatex missing characters in Libertinus

2021-12-02 Thread Wolfgang Engelmann




Am 02.12.21 um 10:18 schrieb Herbert Voss:

Wolfgang Engelmann schrieb:






\usepackage{libertinus}
\setmathfont{STIX2Math.otf}


luaotfload | db : Reload initiated (formats: otf,ttf,ttc); reason: File
not foun
d: "STIX2Math.otf".
! Package fontspec Error: The font "STIX2Math" cannot be found.

I tried also /etc/environment.d
but I do not understand its functioning and stopped it


for font files in official directories you do not need
any path setting. Try the attaches minimal example. It works
under Ubuntu and TeXLive

Herbert


Thanks for the test file. I ran it, but get

/tmp/mozilla_wolfgang0/stix2.lyx is from a newer version of LyX and the 
lyx2lyx script failed to convert it.


my LyX version is 2.3.6
and
sudo apt-get install lyx
tells me for my version:
lyx ist schon die neueste Version (2.3.6-1).
0 aktualisiert, 0 neu installiert, 0 zu entfernen und 0 nicht aktualisiert.

Strange.

Wolfgang
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Re: Biblatex missing characters in Libertinus

2021-12-02 Thread Herbert Voss
Wolfgang Engelmann schrieb:
>
>
>
>> \usepackage{libertinus}
>> \setmathfont{STIX2Math.otf}
>>
>> luaotfload | db : Reload initiated (formats: otf,ttf,ttc); reason: File
>> not foun
>> d: "STIX2Math.otf".
>> ! Package fontspec Error: The font "STIX2Math" cannot be found.
>>
>> I tried also /etc/environment.d
>> but I do not understand its functioning and stopped it

for font files in official directories you do not need
any path setting. Try the attaches minimal example. It works
under Ubuntu and TeXLive

Herbert

stix2.pdf
Description: Adobe PDF document


stix2.lyx
Description: application/lyx
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Re: Biblatex missing characters in Libertinus

2021-12-02 Thread Wolfgang Engelmann



Am 02.12.21 um 09:03 schrieb Wolfgang Engelmann:



Am 02.12.21 um 07:51 schrieb Wolfgang Engelmann:



Am 01.12.21 um 20:18 schrieb Herbert Voss:



Am 01.12.21 um 18:36 schrieb Wolfgang Engelmann:




\usepackage{libertinus}
\setmathfont{STIX2Math.otf}



I inserted your
\usepackage{libertinus}
\setmathfont{STIX2Math.otf}

(I had before
\usepackage{libertinus-otf}
\setmonofont[Scale=MatchLowercase,FakeStretch=0.88,Ligatures=ResetAll]{AnonymousPro} 


>the second one in one line, i.e. [...]{AnonymousPro}


that is also ok, libertinus is a wrapper for libertinus-otf and 
libertinus-type1






which gives an error message
! Package fontspec Error: The font "STIX2Math" cannot be found.



it is  part of a full texlive installation.  You can try the file name:

\setmathfont{STIXTwoMath-Regular.otf}

it it doesn't help, then try to install STIXTwo:
https://ctan.org/tex-archive/fonts/stix2-otf?lang=de

Maybe that Ubuntu has an own package for that.

Herbert
Thanks, Herbert


I do have the sticks2 fonts, as shown by

/usr/local/texlive/2021/texmf-dist/fonts$ find -iname 'stix2*'

May be, I have to set a PATH to it? ow?

Wolfgang


I put

  PATH=/usr/local/texlive/2021/bin/x86_64-linux:$PATH
in /etc/environment with sudo

The file was empty before. I rebootet and started my lyx file again, but 
get again


luaotfload | db : Reload initiated (formats: otf,ttf,ttc); reason: File 
not foun

d: "STIX2Math.otf".
! Package fontspec Error: The font "STIX2Math" cannot be found.

I tried also /etc/environment.d
but I do not understand its functioning and stopped it

Wolfgang


same after a reconfigure of the lyx file

Wolfgang
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Re: Biblatex missing characters in Libertinus

2021-12-02 Thread Wolfgang Engelmann



Am 02.12.21 um 07:51 schrieb Wolfgang Engelmann:



Am 01.12.21 um 20:18 schrieb Herbert Voss:



Am 01.12.21 um 18:36 schrieb Wolfgang Engelmann:




\usepackage{libertinus}
\setmathfont{STIX2Math.otf}



I inserted your
\usepackage{libertinus}
\setmathfont{STIX2Math.otf}

(I had before
\usepackage{libertinus-otf}
\setmonofont[Scale=MatchLowercase,FakeStretch=0.88,Ligatures=ResetAll]{AnonymousPro} 


>the second one in one line, i.e. [...]{AnonymousPro}


that is also ok, libertinus is a wrapper for libertinus-otf and 
libertinus-type1






which gives an error message
! Package fontspec Error: The font "STIX2Math" cannot be found.



it is  part of a full texlive installation.  You can try the file name:

\setmathfont{STIXTwoMath-Regular.otf}

it it doesn't help, then try to install STIXTwo:
https://ctan.org/tex-archive/fonts/stix2-otf?lang=de

Maybe that Ubuntu has an own package for that.

Herbert
Thanks, Herbert


I do have the sticks2 fonts, as shown by

/usr/local/texlive/2021/texmf-dist/fonts$ find -iname 'stix2*'

May be, I have to set a PATH to it? ow?

Wolfgang


I put

 PATH=/usr/local/texlive/2021/bin/x86_64-linux:$PATH
in /etc/environment with sudo

The file was empty before. I rebootet and started my lyx file again, but 
get again


luaotfload | db : Reload initiated (formats: otf,ttf,ttc); reason: File 
not foun

d: "STIX2Math.otf".
! Package fontspec Error: The font "STIX2Math" cannot be found.

I tried also /etc/environment.d
but I do not understand its functioning and stopped it

Wolfgang
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Re: Biblatex missing characters in Libertinus

2021-12-01 Thread Wolfgang Engelmann



Am 01.12.21 um 20:18 schrieb Herbert Voss:



Am 01.12.21 um 18:36 schrieb Wolfgang Engelmann:




\usepackage{libertinus}
\setmathfont{STIX2Math.otf}



I inserted your
\usepackage{libertinus}
\setmathfont{STIX2Math.otf}

(I had before
\usepackage{libertinus-otf}
\setmonofont[Scale=MatchLowercase,FakeStretch=0.88,Ligatures=ResetAll]{AnonymousPro} 


>the second one in one line, i.e. [...]{AnonymousPro}


that is also ok, libertinus is a wrapper for libertinus-otf and 
libertinus-type1






which gives an error message
! Package fontspec Error: The font "STIX2Math" cannot be found.



it is  part of a full texlive installation.  You can try the file name:

\setmathfont{STIXTwoMath-Regular.otf}

it it doesn't help, then try to install STIXTwo:
https://ctan.org/tex-archive/fonts/stix2-otf?lang=de

Maybe that Ubuntu has an own package for that.

Herbert
Thanks, Herbert


I do have the sticks2 fonts, as shown by

/usr/local/texlive/2021/texmf-dist/fonts$ find -iname 'stix2*'

May be, I have to set a PATH to it? ow?

Wolfgang
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Re: Biblatex missing characters in Libertinus

2021-12-01 Thread Herbert Voss



Am 01.12.21 um 18:36 schrieb Wolfgang Engelmann:




\usepackage{libertinus}
\setmathfont{STIX2Math.otf}



I inserted your
\usepackage{libertinus}
\setmathfont{STIX2Math.otf}

(I had before
\usepackage{libertinus-otf}
\setmonofont[Scale=MatchLowercase,FakeStretch=0.88,Ligatures=ResetAll]{AnonymousPro} 


>the second one in one line, i.e. [...]{AnonymousPro}


that is also ok, libertinus is a wrapper for libertinus-otf and 
libertinus-type1






which gives an error message
! Package fontspec Error: The font "STIX2Math" cannot be found.



it is  part of a full texlive installation.  You can try the file name:

\setmathfont{STIXTwoMath-Regular.otf}

it it doesn't help, then try to install STIXTwo:
https://ctan.org/tex-archive/fonts/stix2-otf?lang=de

Maybe that Ubuntu has an own package for that.

Herbert



What was wrong?
Do you need more of the log-file? >
 A font might not be found for many reasons.
 Check the spelling, where the font is installed etc. etc.

 When in doubt, ask someone for help!


luaotfload | aux : no font with id 0

Package fontspec Warning: Font "STIX2Math" does not contain requested 
Script

(fontspec)    "Math".

luaotfload | aux : no font with id 0
luaotfload | aux : no font with id 0

! Package fontspec Error: The font "STIX2Math" cannot be found.



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Re: Biblatex missing characters in Libertinus

2021-12-01 Thread Wolfgang Engelmann



Am 01.12.21 um 16:22 schrieb Herbert Voss:



Am 01.12.21 um 09:22 schrieb Wolfgang Engelmann:
Running a biblatex document for the pdf output I get errors for 
missing characters.

What is the best way to remove these errors?
Wolfgang


Missing character: There is no ▴ (U+25B4) in font 
[LibertinusMath-Regular.otf]
Missing character: There is no œ (U+009C) in font 
[LibertinusSerif-Regular.otf]


Missing character: There is no 휇 (U+1D707) in font 
[LibertinusSerif-Regular.o
Missing character: There is no 휑 (U+1D711) in font 
[LibertinusSerif-Regular.o


Wolfgang, three of the four characters are math symbols. You have
to load a proper math font. Write into the preamble:

\usepackage{libertinus}
\setmathfont{STIX2Math.otf}



I inserted your
\usepackage{libertinus}
\setmathfont{STIX2Math.otf}

(I had before
\usepackage{libertinus-otf}
\setmonofont[Scale=MatchLowercase,FakeStretch=0.88,Ligatures=ResetAll]{AnonymousPro} 


>the second one in one line, i.e. [...]{AnonymousPro}

which gives an error message
! Package fontspec Error: The font "STIX2Math" cannot be found.

What was wrong?
Do you need more of the log-file? >
 A font might not be found for many reasons.
 Check the spelling, where the font is installed etc. etc.

 When in doubt, ask someone for help!


luaotfload | aux : no font with id 0

Package fontspec Warning: Font "STIX2Math" does not contain requested Script
(fontspec)"Math".

luaotfload | aux : no font with id 0
luaotfload | aux : no font with id 0

! Package fontspec Error: The font "STIX2Math" cannot be found.

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Re: Biblatex missing characters in Libertinus

2021-12-01 Thread Wolfgang Engelmann



Am 01.12.21 um 16:22 schrieb Herbert Voss:



Am 01.12.21 um 09:22 schrieb Wolfgang Engelmann:
Running a biblatex document for the pdf output I get errors for 
missing characters.

What is the best way to remove these errors?
Wolfgang


Missing character: There is no ▴ (U+25B4) in font 
[LibertinusMath-Regular.otf]
Missing character: There is no œ (U+009C) in font 
[LibertinusSerif-Regular.otf]


Missing character: There is no 휇 (U+1D707) in font 
[LibertinusSerif-Regular.o
Missing character: There is no 휑 (U+1D711) in font 
[LibertinusSerif-Regular.o


Wolfgang, three of the four characters are math symbols. You have
to load a proper math font. Write into the preamble:

\usepackage{libertinus}
\setmathfont{STIX2Math.otf}


then you can write:



There is a $▴$ (U+25B4) in font [STIX2Math.otf]

There is a œ  (U+009C) in font Libertinus Serif

There is a $휇$ (U+1D707) in font [STIX2Math.otf]

There is a $휑$  (U+1D711) in font [STIX2Math.otf]



Herbert



Thanks a lot, Herbert. That is very helpful.
By the way, I know you have published quite a number of books on topics 
related to tex et al. Is there one which helps to better understand 
biblatex?

Yours,
Wolfgang


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Re: Biblatex missing characters in Libertinus

2021-12-01 Thread Herbert Voss



Am 01.12.21 um 09:22 schrieb Wolfgang Engelmann:
Running a biblatex document for the pdf output I get errors for 
missing characters.

What is the best way to remove these errors?
Wolfgang


Missing character: There is no ▴ (U+25B4) in font 
[LibertinusMath-Regular.otf]
Missing character: There is no œ (U+009C) in font 
[LibertinusSerif-Regular.otf]


Missing character: There is no 휇 (U+1D707) in font 
[LibertinusSerif-Regular.o
Missing character: There is no 휑 (U+1D711) in font 
[LibertinusSerif-Regular.o


Wolfgang, three of the four characters are math symbols. You have
to load a proper math font. Write into the preamble:

\usepackage{libertinus}
\setmathfont{STIX2Math.otf}


then you can write:



There is a $▴$ (U+25B4) in font [STIX2Math.otf]

There is a œ  (U+009C) in font Libertinus Serif

There is a $휇$ (U+1D707) in font [STIX2Math.otf]

There is a $휑$  (U+1D711) in font [STIX2Math.otf]



Herbert


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Biblatex missing characters in Libertinus

2021-12-01 Thread Wolfgang Engelmann
Running a biblatex document for the pdf output I get errors for missing 
characters.

What is the best way to remove these errors?
Wolfgang


Missing character: There is no ▴ (U+25B4) in font 
[LibertinusMath-Regular.otf]
Missing character: There is no œ (U+009C) in font 
[LibertinusSerif-Regular.otf]


Missing character: There is no 휇 (U+1D707) in font 
[LibertinusSerif-Regular.o
Missing character: There is no 휑 (U+1D711) in font 
[LibertinusSerif-Regular.o

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Biblatex styles

2021-10-12 Thread Rich Shepard

One reason the document has no bibliography is that biber cannot find the
authoryear style presented in the Settings -> Bibliography style list:
Package biblatex Info: Trying to load biblatex default data model...
Package biblatex Info: ... file 'blx-dm.def' found.
(/usr/share/texmf-dist/tex/latex/biblatex/blx-dm.def
File: blx-dm.def 2019/12/01 v3.14 biblatex localization (PK/MW)
)
Package biblatex Info: Trying to load biblatex style data model...
Package biblatex Info: ... file 'authoryear.dbx' not found.
Package biblatex Info: Trying to load biblatex custom data model...
Package biblatex Info: ... file 'biblatex-dm.cfg' not found.

Here, /usr/share/texmf-dist/tex/latex/ has several biblatex subdirectories.
Is there a source where I can learn the diffences among them? I've tried a
couple of authoryear-* selections from Settings -> Bibliography Citation and
Bibliography Styles but none I've tried create a bibliography in the
document.

Help's needed!

Rich
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Re: biblatex > two bibliographies

2021-08-10 Thread Daniel

On 2021-08-04 09:37, Daniel wrote:

On 03/08/2021 18:12, Wolfgang Engelmann wrote:

Thanks, Daniel and Herbert for the proposals.
Daniels method works alright, except that it produces Š=Š= at the begin.
I don't know how to get rid of them.

Further Readings
Š=Š=
Bünning, E. (1983). The physiological clock. 2nd ed. Vol. 1. 
Heidelberg Science Library. Springer New York.
Forger, D. B. (2017). Biological clocks, rhythms, and oscillations - 
The theory of biological timekeeping. MIT Press.


I don't see these symbols in the example file. So, there might be 
problem with the files you are using. But it is hard to tell without a 
minimal example or log file.


I missed that LuaTeX is involved. I don't have experience with LuaTeX. 
But it seems the problem is fixed by checking "Use non-TeX fonts (via 
XeTeX/LuaTeX)" in Document > Settings > Fonts.


I am just updating this here because it seems still a bit easier than 
adding keywords.


Daniel#LyX 2.3 created this file. For more info see http://www.lyx.org/
\lyxformat 544
\begin_document
\begin_header
\save_transient_properties true
\origin unavailable
\textclass scrbook
\use_default_options true
\maintain_unincluded_children false
\language english
\language_package default
\inputencoding auto
\fontencoding global
\font_roman "default" "default"
\font_sans "default" "default"
\font_typewriter "default" "default"
\font_math "auto" "auto"
\font_default_family default
\use_non_tex_fonts true
\font_sc false
\font_osf false
\font_sf_scale 100 100
\font_tt_scale 100 100
\use_microtype false
\use_dash_ligatures true
\graphics default
\default_output_format default
\output_sync 0
\bibtex_command default
\index_command default
\paperfontsize default
\spacing single
\use_hyperref true
\pdf_bookmarks true
\pdf_bookmarksnumbered false
\pdf_bookmarksopen false
\pdf_bookmarksopenlevel 1
\pdf_breaklinks false
\pdf_pdfborder false
\pdf_colorlinks false
\pdf_backref false
\pdf_pdfusetitle true
\papersize default
\use_geometry false
\use_package amsmath 1
\use_package amssymb 1
\use_package cancel 1
\use_package esint 1
\use_package mathdots 1
\use_package mathtools 1
\use_package mhchem 1
\use_package stackrel 1
\use_package stmaryrd 1
\use_package undertilde 1
\cite_engine biblatex
\cite_engine_type authoryear
\biblio_style plain
\biblatex_bibstyle authoryear
\biblatex_citestyle authoryear
\use_bibtopic false
\use_indices false
\paperorientation portrait
\suppress_date false
\justification false
\use_refstyle 1
\use_minted 0
\index Index
\shortcut idx
\color #008000
\end_index
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
\paragraph_indentation default
\is_math_indent 0
\math_numbering_side default
\quotes_style english
\dynamic_quotes 0
\papercolumns 1
\papersides 1
\paperpagestyle default
\tracking_changes false
\output_changes false
\html_math_output 0
\html_css_as_file 0
\html_be_strict false
\end_header

\begin_body

\begin_layout Chapter
Normal section
\end_layout

\begin_layout Standard
\begin_inset CommandInset citation
LatexCommand cite
key "aksin"
literal "false"

\end_inset


\begin_inset CommandInset nomenclature
LatexCommand nomenclature
symbol "Test"
description "Test"
literal "false"

\end_inset


\end_layout

\begin_layout Standard
\begin_inset CommandInset nomencl_print
LatexCommand printnomenclature
set_width "auto"

\end_inset


\end_layout

\begin_layout Standard
\begin_inset CommandInset bibtex
LatexCommand bibtex
btprint "btPrintCited"
bibfiles "biblatex-examples"
options "plain"

\end_inset


\end_layout

\begin_layout Chapter*
Further Readings
\end_layout

\begin_layout Standard
\begin_inset ERT
status open

\begin_layout Plain Layout


\backslash
begin{refsection}
\end_layout

\end_inset


\end_layout

\begin_layout Standard
\begin_inset CommandInset citation
LatexCommand nocite
key "almendro"
literal "false"

\end_inset


\end_layout

\begin_layout Standard
\begin_inset ERT
status open

\begin_layout Plain Layout


\backslash
printbibliography[heading=none]
\end_layout

\end_inset


\end_layout

\begin_layout Standard
\begin_inset ERT
status open

\begin_layout Plain Layout


\backslash
end{refsection}
\end_layout

\end_inset


\end_layout

\begin_layout Chapter
\start_of_appendix
Appendix
\end_layout

\end_body
\end_document
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Re: biblatex > two bibliographies

2021-08-04 Thread Daniel

On 03/08/2021 18:12, Wolfgang Engelmann wrote:

Thanks, Daniel and Herbert for the proposals.
Daniels method works alright, except that it produces Š=Š= at the begin.
I don't know how to get rid of them.

Further Readings
Š=Š=
Bünning, E. (1983). The physiological clock. 2nd ed. Vol. 1. Heidelberg 
Science Library. Springer New York.
Forger, D. B. (2017). Biological clocks, rhythms, and oscillations - The 
theory of biological timekeeping. MIT Press.


I don't see these symbols in the example file. So, there might be 
problem with the files you are using. But it is hard to tell without a 
minimal example or log file.


Daniel

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SOLVED: biblatex > two bibliographies

2021-08-04 Thread Wolfgang Engelmann

Thanks, Herbert,
the lyx example was very helpful indeed. Now I know how to do it:
Using a keyword for marking and selecting the bib items which should go 
in one of the bibliographies was an important point. Also how to fill 
out the options. Thanks a lot.

Wolfgang

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Re: biblatex > two bibliographies

2021-08-03 Thread Herbert Voss



Am 03.08.21 um 18:12 schrieb Wolfgang Engelmann:

Thanks, Daniel and Herbert for the proposals.
Daniels method works alright, except that it produces Š=Š= at the begin.
I don't know how to get rid of them.

Further Readings
Š=Š=
Bünning, E. (1983). The physiological clock. 2nd ed. Vol. 1. 
Heidelberg Science Library. Springer New York.
Forger, D. B. (2017). Biological clocks, rhythms, and oscillations - 
The theory of biological timekeeping. MIT Press.


I might need to use the way Herbert recommended:
define keys in the bib-data file to get different bibliographies, e.g. 
for one entry data:

@{book,
  keywords = {second},
  author =
}
Can this be done in the options box of the Biblatex Generated 
Bibliography in LyX? I must play with it (with [xxx]??). It is not 
well described in the LyX help file.


The keywords must be part of the bibliography data file. Look into the 
source

of biblatex-examples.bib, it is part of your local TeX distribution.
Attached is a LyX file wihich uses the already defined keyword "primary"

Herbert




I also tried to use two Biblatex Generated Bibliography behind each 
other. The first one contains the bibliography of all the references 
(AUX2.bib). The second one contains only the recommended literature, 
which are in another bib file (AUX3.bib). The pdf output does not show 
any references.


Would be nice to have an example file in LyX which explains -shows the 
way of getting two biblatex Bibiographies.


Wolfgang


#LyX 2.3 created this file. For more info see http://www.lyx.org/
\lyxformat 544
\begin_document
\begin_header
\save_transient_properties true
\origin unavailable
\textclass scrbook
\begin_preamble

\usepackage{libertinus-otf}
\setmonofont[Scale=MatchLowercase,FakeStretch=0.88,Ligatures=ResetAll]{AnonymousPro}
 
\end_preamble
\use_default_options false
\begin_modules
logicalmkup
\end_modules
\maintain_unincluded_children false
\begin_local_layout
PackageOptions nomencl intoc
\end_local_layout
\language british
\language_package babel
\inputencoding utf8
\fontencoding global
\font_roman "default" "libertine"
\font_sans "default" "helvet"
\font_typewriter "default" "cmtt"
\font_math "auto" "auto"
\font_default_family default
\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100 100
\font_tt_scale 100 100
\use_microtype true
\use_dash_ligatures false
\graphics default
\default_output_format pdf5
\output_sync 1
\bibtex_command biber
\index_command default
\float_placement tbph
\paperfontsize default
\spacing single
\use_hyperref false
\pdf_title "Modelle für biologische Rhythmen"
\pdf_author "Karl-Heinz Witte, Wolfgang Engelmann und Anders Johnsson"
\pdf_subject "Chronobiologie"
\pdf_keywords "Beispiele Rhythmen Modelle Simulationen Bedeutung"
\pdf_bookmarks true
\pdf_bookmarksnumbered false
\pdf_bookmarksopen false
\pdf_bookmarksopenlevel 1
\pdf_breaklinks true
\pdf_pdfborder true
\pdf_colorlinks true
\pdf_backref page
\pdf_pdfusetitle true
\pdf_quoted_options "linkcolor=red, citecolor=blue, urlcolor=green, 
filecolor=blue"
\papersize a5paper
\use_geometry false
\use_package amsmath 1
\use_package amssymb 1
\use_package cancel 1
\use_package esint 0
\use_package mathdots 1
\use_package mathtools 1
\use_package mhchem 0
\use_package stackrel 1
\use_package stmaryrd 1
\use_package undertilde 1
\cite_engine biblatex
\cite_engine_type authoryear
\biblio_style plainnat
\biblio_options minnames=1,maxnames=3
\biblatex_bibstyle authoryear
\biblatex_citestyle authoryear
\use_bibtopic false
\use_indices true
\paperorientation portrait
\suppress_date false
\justification true
\use_refstyle 0
\use_minted 0
\index Subject index
\shortcut idx
\color #008000
\end_index
\index Name index
\shortcut nam
\color #00
\end_index
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
\paragraph_indentation default
\is_math_indent 0
\math_numbering_side default
\quotes_style british
\dynamic_quotes 0
\papercolumns 1
\papersides 2
\paperpagestyle default
\tracking_changes false
\output_changes false
\html_math_output 0
\html_css_as_file 0
\html_be_strict false
\end_header

\begin_body

\begin_layout Chapter
Sources
\end_layout

\begin_layout Standard
The bibliography source is the existing file 
\family typewriter
biblatex-examples.bib.
\end_layout

\begin_layout Standard
\begin_inset CommandInset bibtex
LatexCommand bibtex
btprint "btPrintAll"
bibfiles "biblatex-examples"
biblatexopts "keyword=primary,title=Primary Literature,heading=subbibliography"

\end_inset


\end_layout

\begin_layout Standard
\begin_inset CommandInset bibtex
LatexCommand bibtex
btprint "btPrintAll"
bibfiles "biblatex-examples"
biblatexopts "notkeyword=primary, title=Secondary Literatur, 
heading=subbibliography"

\end_inset


\end_layout

\end_body
\end_document


TwoBib.pdf
Description: Adobe PDF document
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Re: biblatex > two bibliographies

2021-08-03 Thread Wolfgang Engelmann

Thanks, Daniel and Herbert for the proposals.
Daniels method works alright, except that it produces Š=Š= at the begin.
I don't know how to get rid of them.

Further Readings
Š=Š=
Bünning, E. (1983). The physiological clock. 2nd ed. Vol. 1. Heidelberg 
Science Library. Springer New York.
Forger, D. B. (2017). Biological clocks, rhythms, and oscillations - The 
theory of biological timekeeping. MIT Press.


I might need to use the way Herbert recommended:
define keys in the bib-data file to get different bibliographies, e.g. 
for one entry data:

@{book,
  keywords = {second},
  author =
}
Can this be done in the options box of the Biblatex Generated 
Bibliography in LyX? I must play with it (with [xxx]??). It is not well 
described in the LyX help file.


I also tried to use two Biblatex Generated Bibliography behind each 
other. The first one contains the bibliography of all the references 
(AUX2.bib). The second one contains only the recommended literature, 
which are in another bib file (AUX3.bib). The pdf output does not show 
any references.


Would be nice to have an example file in LyX which explains -shows the 
way of getting two biblatex Bibiographies.


Wolfgang
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Re: biblatex > two bibliographies

2021-07-31 Thread Daniel

On 2021-07-31 17:10, Wolfgang Engelmann wrote:



Am 31.07.21 um 15:57 schrieb Daniel:

On 2021-07-31 14:53, Wolfgang Engelmann wrote:
I haven't found a reasonable info to set up two (or more) 
bibliographies under biblatex.
I would like to divide the bibliography in one part for normal 
reference stuff, and one part for a few references which are 
recommended for further readings.

The lyx menu for multiple bibliographies allows it
per partition, chapter, section, subsection, and child document,
but I would like to have it in the one bibliography with different 
headings (colour?) or in two bibliographies following each other 
directly and corresponding heading(s).

Could somebody tell me where to find infos for it?
Wolfgang


For the multiple bibliographies part, you could manually insert the 
refsection environment as in the attached file.


Daniel

Thanks, Daniel, for the example. What I meant was the bibliography at 
the end of my (KOMA script) book and the additional one in or after that 
one. My bibliography comes after the nomenclature (=glossary) and before 
the appendix.

Yours comes after a section.
Wolfgang


Sorry, I am still missing what the issue is. I can just change the 
example file's class to a KOMA-Script Book, make the sections chapters, 
insert a nomenclature before the bibliographies, add an appendix after 
them and it seems to have the structure you want (again attached). So, 
that is probably not all you want, or?


Daniel#LyX 2.3 created this file. For more info see http://www.lyx.org/
\lyxformat 544
\begin_document
\begin_header
\save_transient_properties true
\origin unavailable
\textclass scrbook
\use_default_options true
\maintain_unincluded_children false
\language english
\language_package default
\inputencoding auto
\fontencoding global
\font_roman "default" "default"
\font_sans "default" "default"
\font_typewriter "default" "default"
\font_math "auto" "auto"
\font_default_family default
\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100 100
\font_tt_scale 100 100
\use_microtype false
\use_dash_ligatures true
\graphics default
\default_output_format default
\output_sync 0
\bibtex_command default
\index_command default
\paperfontsize default
\spacing single
\use_hyperref true
\pdf_bookmarks true
\pdf_bookmarksnumbered false
\pdf_bookmarksopen false
\pdf_bookmarksopenlevel 1
\pdf_breaklinks false
\pdf_pdfborder false
\pdf_colorlinks false
\pdf_backref false
\pdf_pdfusetitle true
\papersize default
\use_geometry false
\use_package amsmath 1
\use_package amssymb 1
\use_package cancel 1
\use_package esint 1
\use_package mathdots 1
\use_package mathtools 1
\use_package mhchem 1
\use_package stackrel 1
\use_package stmaryrd 1
\use_package undertilde 1
\cite_engine biblatex
\cite_engine_type authoryear
\biblio_style plain
\biblatex_bibstyle authoryear
\biblatex_citestyle authoryear
\use_bibtopic false
\use_indices false
\paperorientation portrait
\suppress_date false
\justification false
\use_refstyle 1
\use_minted 0
\index Index
\shortcut idx
\color #008000
\end_index
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
\paragraph_indentation default
\is_math_indent 0
\math_numbering_side default
\quotes_style english
\dynamic_quotes 0
\papercolumns 1
\papersides 1
\paperpagestyle default
\tracking_changes false
\output_changes false
\html_math_output 0
\html_css_as_file 0
\html_be_strict false
\end_header

\begin_body

\begin_layout Chapter
Normal section
\end_layout

\begin_layout Standard
\begin_inset CommandInset citation
LatexCommand cite
key "aksin"
literal "false"

\end_inset


\begin_inset CommandInset nomenclature
LatexCommand nomenclature
symbol "Test"
description "Test"
literal "false"

\end_inset


\end_layout

\begin_layout Standard
\begin_inset CommandInset nomencl_print
LatexCommand printnomenclature
set_width "auto"

\end_inset


\end_layout

\begin_layout Standard
\begin_inset CommandInset bibtex
LatexCommand bibtex
btprint "btPrintCited"
bibfiles "biblatex-examples"
options "plain"

\end_inset


\end_layout

\begin_layout Chapter*
Further Readings
\end_layout

\begin_layout Standard
\begin_inset ERT
status open

\begin_layout Plain Layout


\backslash
begin{refsection}
\end_layout

\end_inset


\end_layout

\begin_layout Standard
\begin_inset CommandInset citation
LatexCommand nocite
key "almendro"
literal "false"

\end_inset


\end_layout

\begin_layout Standard
\begin_inset ERT
status open

\begin_layout Plain Layout


\backslash
printbibliography[heading=none]
\end_layout

\end_inset


\end_layout

\begin_layout Standard
\begin_inset ERT
status open

\begin_layout Plain Layout


\backslash
end{refsection}
\end_layout

\end_inset


\end_layout

\begin_layout Chapter
\start_of_appendix
Appendix
\end_layout

\end_body
\end_document
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Re: biblatex > two bibliographies

2021-07-31 Thread Wolfgang Engelmann




Am 31.07.21 um 15:57 schrieb Daniel:

On 2021-07-31 14:53, Wolfgang Engelmann wrote:
I haven't found a reasonable info to set up two (or more) 
bibliographies under biblatex.
I would like to divide the bibliography in one part for normal 
reference stuff, and one part for a few references which are 
recommended for further readings.

The lyx menu for multiple bibliographies allows it
per partition, chapter, section, subsection, and child document,
but I would like to have it in the one bibliography with different 
headings (colour?) or in two bibliographies following each other 
directly and corresponding heading(s).

Could somebody tell me where to find infos for it?
Wolfgang


For the multiple bibliographies part, you could manually insert the 
refsection environment as in the attached file.


Daniel

Thanks, Daniel, for the example. What I meant was the bibliography at 
the end of my (KOMA script) book and the additional one in or after that 
one. My bibliography comes after the nomenclature (=glossary) and before 
the appendix.

Yours comes after a section.
Wolfgang
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Re: biblatex > two bibliographies

2021-07-31 Thread Herbert Voss



Am 31.07.21 um 14:53 schrieb Wolfgang Engelmann:
I haven't found a reasonable info to set up two (or more) 
bibliographies under biblatex.
I would like to divide the bibliography in one part for normal 
reference stuff, and one part for a few references which are 
recommended for further readings.

The lyx menu for multiple bibliographies allows it
per partition, chapter, section, subsection, and child document,
but I would like to have it in the one bibliography with different 
headings (colour?) or in two bibliographies following each other 
directly and corresponding heading(s).

Could somebody tell me where to find infos for it?


For example:

\printbibliography[type=book,title=Books]
\printbibliography[nottype=book,title=Other references]

for two different libraries. It is alo possible to define keys in the
bib-data file to get diffent bibliographies, e.g. for one entry data:

@{book,
  keywords = {second},
  author =
}

\printbibliography[nottype=second,title=Books]
\printbibliography[type=second,title=Other references]


Herbert
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Re: biblatex > two bibliographies

2021-07-31 Thread Daniel

On 2021-07-31 14:53, Wolfgang Engelmann wrote:
I haven't found a reasonable info to set up two (or more) bibliographies 
under biblatex.
I would like to divide the bibliography in one part for normal reference 
stuff, and one part for a few references which are recommended for 
further readings.

The lyx menu for multiple bibliographies allows it
per partition, chapter, section, subsection, and child document,
but I would like to have it in the one bibliography with different 
headings (colour?) or in two bibliographies following each other 
directly and corresponding heading(s).

Could somebody tell me where to find infos for it?
Wolfgang


For the multiple bibliographies part, you could manually insert the 
refsection environment as in the attached file.


Daniel#LyX 2.3 created this file. For more info see http://www.lyx.org/
\lyxformat 544
\begin_document
\begin_header
\save_transient_properties true
\origin unavailable
\textclass article
\use_default_options true
\maintain_unincluded_children false
\language english
\language_package default
\inputencoding auto
\fontencoding global
\font_roman "default" "default"
\font_sans "default" "default"
\font_typewriter "default" "default"
\font_math "auto" "auto"
\font_default_family default
\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100 100
\font_tt_scale 100 100
\use_microtype false
\use_dash_ligatures true
\graphics default
\default_output_format default
\output_sync 0
\bibtex_command default
\index_command default
\paperfontsize default
\spacing single
\use_hyperref true
\pdf_bookmarks true
\pdf_bookmarksnumbered false
\pdf_bookmarksopen false
\pdf_bookmarksopenlevel 1
\pdf_breaklinks false
\pdf_pdfborder false
\pdf_colorlinks false
\pdf_backref false
\pdf_pdfusetitle true
\papersize default
\use_geometry false
\use_package amsmath 1
\use_package amssymb 1
\use_package cancel 1
\use_package esint 1
\use_package mathdots 1
\use_package mathtools 1
\use_package mhchem 1
\use_package stackrel 1
\use_package stmaryrd 1
\use_package undertilde 1
\cite_engine biblatex
\cite_engine_type authoryear
\biblio_style plain
\biblatex_bibstyle authoryear
\biblatex_citestyle authoryear
\use_bibtopic false
\use_indices false
\paperorientation portrait
\suppress_date false
\justification false
\use_refstyle 1
\use_minted 0
\index Index
\shortcut idx
\color #008000
\end_index
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
\paragraph_indentation default
\is_math_indent 0
\math_numbering_side default
\quotes_style english
\dynamic_quotes 0
\papercolumns 1
\papersides 1
\paperpagestyle default
\tracking_changes false
\output_changes false
\html_math_output 0
\html_css_as_file 0
\html_be_strict false
\end_header

\begin_body

\begin_layout Section
Normal section
\end_layout

\begin_layout Standard
\begin_inset CommandInset citation
LatexCommand cite
key "aksin"
literal "false"

\end_inset


\end_layout

\begin_layout Standard
\begin_inset CommandInset bibtex
LatexCommand bibtex
btprint "btPrintCited"
bibfiles "biblatex-examples"
options "plain"

\end_inset


\end_layout

\begin_layout Section*
Further Readings
\end_layout

\begin_layout Standard
\begin_inset ERT
status open

\begin_layout Plain Layout


\backslash
begin{refsection}
\end_layout

\end_inset


\end_layout

\begin_layout Standard
\begin_inset CommandInset citation
LatexCommand nocite
key "almendro"
literal "false"

\end_inset


\end_layout

\begin_layout Standard
\begin_inset ERT
status open

\begin_layout Plain Layout


\backslash
printbibliography[heading=none]
\end_layout

\end_inset


\end_layout

\begin_layout Standard
\begin_inset ERT
status open

\begin_layout Plain Layout


\backslash
end{refsection}
\end_layout

\end_inset


\end_layout

\end_body
\end_document
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biblatex > two bibliographies

2021-07-31 Thread Wolfgang Engelmann
I haven't found a reasonable info to set up two (or more) bibliographies 
under biblatex.
I would like to divide the bibliography in one part for normal reference 
stuff, and one part for a few references which are recommended for 
further readings.

The lyx menu for multiple bibliographies allows it
per partition, chapter, section, subsection, and child document,
but I would like to have it in the one bibliography with different 
headings (colour?) or in two bibliographies following each other 
directly and corresponding heading(s).

Could somebody tell me where to find infos for it?
Wolfgang
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Re: biblatex style option Springer Publisher

2021-07-31 Thread Dr Eberhard Lisse

Wolfgang,

this is a LaTeX issue, niot a LyX issue.


el

On 2021-07-31 08:56 , Wolfgang Engelmann wrote:

Herbert Voss pointed to this site
  https://hvoss.org/biblatex-spbasic.zip
where the two style files

biblatex-spbasic.bbx
biblatex-spbasic.cbx

are found which can be used for Springer publications.
Herbert Voss said, that they can be stored in
/usr/local/texlive/2021/texmf-local/tex/latex/biblatex-spbasic
or
/usr/local/texlive/texmf-local/tex/latex/biblatex-spbasic

He also uploaded the package to CTAN, where it should be available.

Add the files to Lyx > Document > settings > Bibliography
Not sure, whether a texhash and reconfigure is needed afterward.

#
Here my question:
If I export the lyx document as tar.gz (for sharing it with others or archiving 
it) the style files ARE NOT included. I did this before under bibtex with the 
spbasic of Springer and this was saved in the archive.
Could somebody check whether the biblatex-spbasic files are indeed NOT saved in 
the arch file and could this perhaps be changed, since it is essential for 
running the lyx document.
#

Wolfgang





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biblatex style option Springer Publisher

2021-07-31 Thread Wolfgang Engelmann

Herbert Voss pointed to this site
 https://hvoss.org/biblatex-spbasic.zip
where the two style files

biblatex-spbasic.bbx
biblatex-spbasic.cbx

are found which can be used for Springer publications.
Herbert Voss said, that they can be stored in
/usr/local/texlive/2021/texmf-local/tex/latex/biblatex-spbasic
or
/usr/local/texlive/texmf-local/tex/latex/biblatex-spbasic

He also uploaded the package to CTAN, where it should be available.

Add the files to Lyx > Document > settings > Bibliography
Not sure, whether a texhash and reconfigure is needed afterward.

#
Here my question:
If I export the lyx document as tar.gz (for sharing it with others or 
archiving it) the style files ARE NOT included. I did this before under 
bibtex with the spbasic of Springer and this was saved in the archive.
Could somebody check whether the biblatex-spbasic files are indeed NOT 
saved in the arch file and could this perhaps be changed, since it is 
essential for running the lyx document.

#

Wolfgang


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Re: Biblatex Bibliography

2021-07-22 Thread Wolfgang Engelmann




Am 22.07.21 um 09:09 schrieb Herbert Voss:

Wolfgang Engelmann schrieb:

In the LyX Biblatex Generated Bibliography the menu point Rescan
shows
scan for new databases and styles (if the mouse pointer points on it)
but there is no way to select the styles (in my case biblatex-spbasic)
In options?? (I have there maxname=2)

In Documents>Bibliography is, however, a place Biblatex citation style
where I inserted biblatex-spbasic (and under processor biber)

if so > but there is no way to select the styles (in my case
biblatex-spbasic)
wouldn't it be better to remove
   and styles
or, better, to tell the user that the style has to be inserted in
Documents>Bibliography


You need an up-to-date TeX distribution and then the style
biblatex-spbasic should be available. See attached image.


Herbert

I do have it, Herbert. And I have the same items there as you have, and 
the output is ok.


My question was only, why in the Biblatex of LYX (!) this is set:

>> if so > but there is no way to select the styles (in my case
>> biblatex-spbasic)
>> wouldn't it be better to remove
>>and styles
>> or, better, to tell the user that the style has to be inserted in
>> Documents>Bibliography

So the questions goes to the lyx maintainers

Wolfgang
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Biblatex Bibliography

2021-07-22 Thread Wolfgang Engelmann

In the LyX Biblatex Generated Bibliography the menu point Rescan
shows
scan for new databases and styles (if the mouse pointer points on it)
but there is no way to select the styles (in my case biblatex-spbasic)
In options?? (I have there maxname=2)

In Documents>Bibliography is, however, a place Biblatex citation style 
where I inserted biblatex-spbasic (and under processor biber)


if so > but there is no way to select the styles (in my case 
biblatex-spbasic)

wouldn't it be better to remove
 and styles
or, better, to tell the user that the style has to be inserted in 
Documents>Bibliography


Wolfgang
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SOLVED> biblatex style options

2021-07-14 Thread Wolfgang Engelmann




However, I uploaded the package to CTAN, it should be available
tomorrow wit the official update.

Herbert


Good to know! Thanks, Herbert
Wolfgang


Thanks a lot, Herbert. After updating from CTAN the biblatex-spbasic 
citation and bibliography style file were found. Good.


Wolfgang
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Re: biblatex style options

2021-07-12 Thread Wolfgang Engelmann



Am 12.07.21 um 14:45 schrieb Herbert Voss:


Wolfgang Engelmann schrieb:



Am 10.07.21 um 21:25 schrieb Herbert Voss:

Am 10.07.21 um 10:57 schrieb Wolfgang Engelmann:



This is a screenshot of a part of the references of a Springer book.
No point after the forename.



Wolfgang, I downloaded an old version of spbasic.bst which has dots.
However, now I found a new one on Springer's site. Download
https://hvoss.org/biblatex-spbasic.zip   and put the two files

biblatex-spbasic.bbx
biblatex-spbasic.cbx

into a new directory

/usr/local/texlive/2021/texmf-local/tex/latex/biblatex-spbasic


Sorry Wolfgang,
it should be

/usr/local/texlive/texmf-local/tex/latex/biblatex-spbasic

be without the 2021

However, I uploaded the package to CTAN, it should be available
tomorrow wit the official update.

Herbert


Good to know! Thanks, Herbert
Wolfgang
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Re: biblatex style options

2021-07-12 Thread Herbert Voss

Wolfgang Engelmann schrieb:
>
>
> Am 10.07.21 um 21:25 schrieb Herbert Voss:
>> Am 10.07.21 um 10:57 schrieb Wolfgang Engelmann:
>>>
>>>
>>> This is a screenshot of a part of the references of a Springer book.
>>> No point after the forename.
>>
>>
>> Wolfgang, I downloaded an old version of spbasic.bst which has dots.
>> However, now I found a new one on Springer's site. Download
>> https://hvoss.org/biblatex-spbasic.zip   and put the two files
>>
>> biblatex-spbasic.bbx
>> biblatex-spbasic.cbx
>>
>> into a new directory
>>
>> /usr/local/texlive/2021/texmf-local/tex/latex/biblatex-spbasic

Sorry Wolfgang,
it should be

/usr/local/texlive/texmf-local/tex/latex/biblatex-spbasic

be without the 2021

However, I uploaded the package to CTAN, it should be available
tomorrow wit the official update.

Herbert


>>
>> or any other _local_ texmf directory.
>>
>> Then run
>>
>> texhash
>>
>> to update the file name database. Maybe that you must use sudo.
>>
>> Then open the attched LyX file or use your own one and change the
>> entries in Document->settings->Bibliography
>> (see atched screenshot).  Then run your example and you should get
>> the desired bibstyle in the bibliography (see screenshot).
>>
>> best
>> Herbert
>>
> Thanks again, Herbert.
> I did, as you suggested.
> biblatex-spbasic.zip
> contains doc with biblatex-spbasic.pdf and .tex
> and latex containing biblatex-spbasic.bbx (biblatex style for spbasic.bst)
> and biblatex-spbasic.cbx
>
> I put both files in
> /us/local/texlive/2021/texmf-local/tex/latex/biblatex-spbasic/
> did a texhash and sudo texhash
>
> changed the settings according to your screenshot (including biber
> setting)
>
> did a tools/reconfigure
>
> but I can't find in the lyx file under Document settings > Bibliography
>  > Biblatex citation the biblatex-spbasic files
> same for Biblatex bibliography style
>
> I had to do the copying as sudo. Could this be the reason for the failure?
>
> With the sp-basic.bst file for bibtex is was sufficient to put this file
> in the folder of the lyx document. I could load this style file into the
> document.
>
> However, I noted that the biblatex-spbasic.bbx and biblatex-spbasic.cbx
> files are owned by root.
>
> How would I change it, if I am in the folder with the two biblatex files
>
> with sudo chown ...
> or chmod.. (forgot the shell command in linux)
>
> or should I change the entire :
> sudo chown -R ...
>
> Wolfgang
>
>
>
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>



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Re: biblatex style options

2021-07-12 Thread Wolfgang Engelmann



Am 12.07.21 um 10:58 schrieb Wolfgang Engelmann:



Am 10.07.21 um 21:25 schrieb Herbert Voss:

Am 10.07.21 um 10:57 schrieb Wolfgang Engelmann:



This is a screenshot of a part of the references of a Springer book.
No point after the forename.



Wolfgang, I downloaded an old version of spbasic.bst which has dots.
However, now I found a new one on Springer's site. Download
https://hvoss.org/biblatex-spbasic.zip   and put the two files

biblatex-spbasic.bbx
biblatex-spbasic.cbx

into a new directory

/usr/local/texlive/2021/texmf-local/tex/latex/biblatex-spbasic

or any other _local_ texmf directory.

Then run

texhash

to update the file name database. Maybe that you must use sudo.

Then open the attched LyX file or use your own one and change the
entries in Document->settings->Bibliography
(see atched screenshot).  Then run your example and you should get
the desired bibstyle in the bibliography (see screenshot).

best
Herbert


Thanks again, Herbert.
I did, as you suggested.
biblatex-spbasic.zip
contains doc with biblatex-spbasic.pdf and .tex
and latex containing biblatex-spbasic.bbx (biblatex style for spbasic.bst)
and biblatex-spbasic.cbx

I put both files in
/us/local/texlive/2021/texmf-local/tex/latex/biblatex-spbasic/
did a texhash and sudo texhash

changed the settings according to your screenshot (including biber setting)

did a tools/reconfigure

but I can't find in the lyx file under Document settings > Bibliography 
 > Biblatex citation the biblatex-spbasic files

same for Biblatex bibliography style

I had to do the copying as sudo. Could this be the reason for the failure?

With the sp-basic.bst file for bibtex is was sufficient to put this file 
in the folder of the lyx document. I could load this style file into the 
document.


However, I noted that the biblatex-spbasic.bbx and biblatex-spbasic.cbx 
files are owned by root.


How would I change it, if I am in the folder with the two biblatex files

with sudo chown ...
or chmod.. (forgot the shell command in linux)

or should I change the entire 


FORGOT: the entire texlive/2021 folder
Wolfgang
:

sudo chown -R ...

Wolfgang




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Re: biblatex style options

2021-07-12 Thread Wolfgang Engelmann



Am 10.07.21 um 21:25 schrieb Herbert Voss:

Am 10.07.21 um 10:57 schrieb Wolfgang Engelmann:



This is a screenshot of a part of the references of a Springer book.
No point after the forename.



Wolfgang, I downloaded an old version of spbasic.bst which has dots.
However, now I found a new one on Springer's site. Download
https://hvoss.org/biblatex-spbasic.zip   and put the two files

biblatex-spbasic.bbx
biblatex-spbasic.cbx

into a new directory

/usr/local/texlive/2021/texmf-local/tex/latex/biblatex-spbasic

or any other _local_ texmf directory.

Then run

texhash

to update the file name database. Maybe that you must use sudo.

Then open the attched LyX file or use your own one and change the
entries in Document->settings->Bibliography
(see atched screenshot).  Then run your example and you should get
the desired bibstyle in the bibliography (see screenshot).

best
Herbert


Thanks again, Herbert.
I did, as you suggested.
biblatex-spbasic.zip
contains doc with biblatex-spbasic.pdf and .tex
and latex containing biblatex-spbasic.bbx (biblatex style for spbasic.bst)
and biblatex-spbasic.cbx

I put both files in
/us/local/texlive/2021/texmf-local/tex/latex/biblatex-spbasic/
did a texhash and sudo texhash

changed the settings according to your screenshot (including biber setting)

did a tools/reconfigure

but I can't find in the lyx file under Document settings > Bibliography 
> Biblatex citation the biblatex-spbasic files

same for Biblatex bibliography style

I had to do the copying as sudo. Could this be the reason for the failure?

With the sp-basic.bst file for bibtex is was sufficient to put this file 
in the folder of the lyx document. I could load this style file into the 
document.


However, I noted that the biblatex-spbasic.bbx and biblatex-spbasic.cbx 
files are owned by root.


How would I change it, if I am in the folder with the two biblatex files

with sudo chown ...
or chmod.. (forgot the shell command in linux)

or should I change the entire :
sudo chown -R ...

Wolfgang



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Re: biblatex style options

2021-07-10 Thread Wolfgang Engelmann




Am 10.07.21 um 09:20 schrieb Wolfgang Engelmann:
I asked the Springer people whether a biblatex style corresponding to 
their spbasic.bst exists, but the answer was not very helpful ('it 
doesn't matter ...).


What I like to know is, how to set the options of biblatex in order to 
get the spbasic output. Or could I use the bibtex export of the 
bibliography and include it in the pdf file? Not very elegant...


I remember, for bibtex exists a link which shows the various outputs of 
the bibliography styles+options (and of the text citations) together 
with the way to proceed to get them. Would be good to have something 
similar for biblatex.


Specifically, I would like to have in the bibliography Authorname, only 
first character of forename without point (e.g. Mayer P). As it is now 
the forenames are either before or after the name, abbreviated or in 
full. How to restrict it to 3 names was explained already by Herbert Voss.


Any hints?
Wolfgang


Found this:
http://tug.ctan.org/info/biblatex-cheatsheet/biblatex-cheatsheet.pdf
but could not find an answer to the specific questions above
Wolfgang
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biblatex style options

2021-07-10 Thread Wolfgang Engelmann
I asked the Springer people whether a biblatex style corresponding to 
their spbasic.bst exists, but the answer was not very helpful ('it 
doesn't matter ...).


What I like to know is, how to set the options of biblatex in order to 
get the spbasic output. Or could I use the bibtex export of the 
bibliography and include it in the pdf file? Not very elegant...


I remember, for bibtex exists a link which shows the various outputs of 
the bibliography styles+options (and of the text citations) together 
with the way to proceed to get them. Would be good to have something 
similar for biblatex.


Specifically, I would like to have in the bibliography Authorname, only 
first character of forename without point (e.g. Mayer P). As it is now 
the forenames are either before or after the name, abbreviated or in 
full. How to restrict it to 3 names was explained already by Herbert Voss.


Any hints?
Wolfgang



Am 08.07.21 um 14:42 schrieb Wolfgang Engelmann:



Am 08.07.21 um 14:22 schrieb Herbert Voss:



Am 08.07.21 um 13:47 schrieb Wolfgang Engelmann:



What would be recommended to get familiar with the handling of the 
biblatex references? I used to use spbasic.bst from Springer 
Publisher modified slightly to show maximally 3 authors only.


that is an authoryear style



Is this style available for biblatex/biber?


add the optional arguments

style=authoryear,maxnames=3,minnames=1

to biblatex

Herbert


Thanks again, Herbert.
I don't want to bother you and others too much,
but there are more details, e.g.
the name should be Name, P (P for prename, only first character shown 
without point

At the moment it is e.g. prename name or name prename or name P etc
Thats the reason I would like a ref for biblatex.

The biblatex Programmable Bibliographies by Philip Kime, Moritz 
Wemheuer, Philipp Lehman

but its a bit overkill.

Wolfgang





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Re: biblatex style - Springer publisher

2021-07-08 Thread Herbert Voss

Am 08.07.21 um 14:42 schrieb Wolfgang Engelmann:


I don't want to bother you and others too much,
but there are more details, e.g.
the name should be Name, P (P for prename, only first character shown 
without point

At the moment it is e.g. prename name or name prename or name P etc
Thats the reason I would like a ref for biblatex.

The biblatex Programmable Bibliographies by Philip Kime, Moritz 
Wemheuer, Philipp Lehman

but its a bit overkill.


Show a complete example with a screenshot and if possible with the
corresponding bibtex-data

Herbert
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Re: biblatex style - Springer publisher

2021-07-08 Thread Wolfgang Engelmann




Am 08.07.21 um 14:22 schrieb Herbert Voss:



Am 08.07.21 um 13:47 schrieb Wolfgang Engelmann:



What would be recommended to get familiar with the handling of the 
biblatex references? I used to use spbasic.bst from Springer Publisher 
modified slightly to show maximally 3 authors only.


that is an authoryear style



Is this style available for biblatex/biber?


add the optional arguments

style=authoryear,maxnames=3,minnames=1

to biblatex

Herbert


Thanks again, Herbert.
I don't want to bother you and others too much,
but there are more details, e.g.
the name should be Name, P (P for prename, only first character shown 
without point

At the moment it is e.g. prename name or name prename or name P etc
Thats the reason I would like a ref for biblatex.

The biblatex Programmable Bibliographies by Philip Kime, Moritz 
Wemheuer, Philipp Lehman

but its a bit overkill.

Wolfgang




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Re: biblatex style - Springer publisher

2021-07-08 Thread Herbert Voss




Am 08.07.21 um 13:47 schrieb Wolfgang Engelmann:



What would be recommended to get familiar with the handling of the 
biblatex references? I used to use spbasic.bst from Springer Publisher 
modified slightly to show maximally 3 authors only.


that is an authoryear style



Is this style available for biblatex/biber?


add the optional arguments

style=authoryear,maxnames=3,minnames=1

to biblatex

Herbert
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biblatex style - Springer publisher

2021-07-08 Thread Wolfgang Engelmann




What would be recommended to get familiar with the handling of the 
biblatex references? I used to use spbasic.bst from Springer Publisher 
modified slightly to show maximally 3 authors only.


Is this style available for biblatex/biber?

Wolfgang
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Re: Biblatex issues [RESOLVED]

2021-03-26 Thread Rich Shepard

On Fri, 26 Mar 2021, Wolfgang Engelmann wrote:


You  know the JabRef quality>find duplicates, I assume Also: quality>check
integrity is helpful


Wolfgang,

Yes, I've used those tools in the past. The last few times I used JabRef I
had no issues so it didn't occur to me to look for duplicates yesterday.

Regards,

Rich

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Re: Biblatex issues [RESOLVED]

2021-03-26 Thread Wolfgang Engelmann




Am 25.03.21 um 23:13 schrieb Rich Shepard:

On Thu, 25 Mar 2021, Rich Shepard wrote:


Well, this last one stymies me. The displayed LyX error is attached. The
jabref.bib file entry follows:


Paul,

Mea culpa! I removed the duplicate Millard1988 from the JabRef display, but
not from the .bib text file I had open. Realizing the text file had
duplicate entries I deleted one, saved the .bib file and all compilation
errors went away. My bad :-(

Regards,

Rich


You  know the JabRef quality>find duplicates, I assume
Also: quality>check integrity is helpful
Wolfgang
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Re: Biblatex issues [RESOLVED]

2021-03-25 Thread Rich Shepard

On Thu, 25 Mar 2021, Rich Shepard wrote:


Well, this last one stymies me. The displayed LyX error is attached. The
jabref.bib file entry follows:


Paul,

Mea culpa! I removed the duplicate Millard1988 from the JabRef display, but
not from the .bib text file I had open. Realizing the text file had
duplicate entries I deleted one, saved the .bib file and all compilation
errors went away. My bad :-(

Regards,

Rich

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Re: Biblatex issues

2021-03-25 Thread Rich Shepard

On Thu, 25 Mar 2021, Rich Shepard wrote:


I'm getting different errors in the whole file. Will explore that error
log before asking for fresh eyeballs.


Paul,

Well, this last one stymies me. The displayed LyX error is attached. The
jabref.bib file entry follows:

--8<-
@article{Junk1980,
abstract = {Selected organic components in samples collected from 
monitoring wells
and from surface water are shown to follow definite areal, vertical,
and temporal trends in concentrations. Atrazine 
(2-chloro-4[ethylamino]-6-[isopropylamino]-s-triazine),
alachlor (2-chloro-2',6'-diethyl-N-[methoxymethyl]acetanilide) and
dieldrin 
(1,2,3,4,10,10-hexachloro-exo-6,7-epoxy-1,4.4a,5,6,7.8.8a-octahydro-1,4-endo,exo5,8,dimethanonaphthalene)
were measured in 64, 35, and 35 water samples, respectively. The
atrazine amounts ranged from < 0.01 to 88 ug/liter. Peak concentrations
were observed in shallow well water downgradient from irrigated fields
at the end of the irrigation season. The areal and vertical 
distributions
of atrazine are closely associated with those of nitrate-nitrogen
(NO3-N), which was measured as an indicator of deep percolation from
irrigated croplands. However, temporal variations in atrazine 
concentrations
suggest that it is a non-conservative constituent of ground water.
Alachlor and dieldrin amounts were extremely low, being less than
0.1 ug/liter in all but one water sample which was taken from a well
located in an excessively well-drained area. Dissolved organic carbon
(DOC) was measured in 95 water samples and the amounts ranged from
0.2 to 4.8 mg/liter. Maximum occurred in shallow wells and there
were no seasonal assocation with either atrazine or NO3-N. The DOC
data suggest percolation from the unsaturated zone and partial removal
from solution during vertical transport through the saturated zone.},
author = {Junk, G.A. and Spalding, R.F. and Richard, J.J.},
journal = {Journal of Environmental Quality},
keywords = {pesticides, ground water, DOC, water quality, atrazine, 
alachlor, nitrate nitrogen, suface water, organic},
number = {3},
pages = {479--483},
title = {{Areal, vertical, and temporal differences in ground water 
chemistry: II. Organic constituents}},
volume = {9},
year = {1980}
} ->8

I replaced the n-dash in the pages which seems to be the problem but it's
not making a difference. Perhaps I need to close jabref and lyx and try
again. If you see something I've missed please let me know.

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Re: Biblatex issues

2021-03-25 Thread Rich Shepard

On Thu, 25 Mar 2021, Paul A. Rubin wrote:


Your MWE does not include a .bib file, so it's not possible to diagnose
the exact problem. That said, your log's first encoding error looks as if
pdflatex gagged on the dash(es) separating two page numbers in a
reference.


Paul,

Yes, the van den Berg reference. I fixed that in the .bib file. I didn't see
an issue on the other file, but replaced the hyphen anyway.

I'm getting different errors in the whole file. Will explore that error log
before asking for fresh eyeballs.

Thanks and stay well,

Rich
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Re: Biblatex issues

2021-03-25 Thread Paul A. Rubin

On 3/25/21 4:40 PM, Rich Shepard wrote:
It's been a long time since I last wrote a document with a 
bibliography. I
have compilation issues on this one and cannot find a saved thread 
with the

solution.

I switched from bibtex to biblatex last year (or earlier) and want to use
the author-date format for citations. Since I upgraded to TeXLive-2020 
I may

have lost changes that worked.

A MWE is attached (without the entire JabRef bibliography) as well as the
full error log. I don't understand why I'm getting errors when I try to
compile the file with pdflatex, yet the PDF is produced.

I'm confused.

TIA,

Rich


Rich,

Your MWE does not include a .bib file, so it's not possible to diagnose 
the exact problem. That said, your log's first encoding error looks as 
if pdflatex gagged on the dash(es) separating two page numbers in a 
reference. I suspect the offending characters are in the .bib file, and 
I would not be surprised if they come from a reference that was copied 
from a PDF file or some such and pasted into JabRef. The second encoding 
error seems to involve the same citations, and again seems to be in the 
vicinity of the page range, although the pathology appears slightly 
different.


Paul

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Biblatex issues

2021-03-25 Thread Rich Shepard

It's been a long time since I last wrote a document with a bibliography. I
have compilation issues on this one and cannot find a saved thread with the
solution.

I switched from bibtex to biblatex last year (or earlier) and want to use
the author-date format for citations. Since I upgraded to TeXLive-2020 I may
have lost changes that worked.

A MWE is attached (without the entire JabRef bibliography) as well as the
full error log. I don't understand why I'm getting errors when I try to
compile the file with pdflatex, yet the PDF is produced.

I'm confused.

TIA,

Rich#LyX 2.3 created this file. For more info see http://www.lyx.org/
\lyxformat 544
\begin_document
\begin_header
\save_transient_properties true
\origin unavailable
\textclass scrbook
\begin_preamble
\date{}
\usepackage{textcomp,url,multicol,textgreek}
%\setkomafont{sectioning}{\rmfamily}
\end_preamble
\use_default_options false
\begin_modules
natbibapa
\end_modules
\maintain_unincluded_children false
\language english
\language_package default
\inputencoding auto
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\font_roman "palatino" "default"
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\font_sf_scale 100 100
\font_tt_scale 100 100
\use_microtype false
\use_dash_ligatures false
\graphics default
\default_output_format default
\output_sync 0
\bibtex_command bibtex
\index_command default
\paperfontsize default
\spacing single
\use_hyperref false
\papersize letterpaper
\use_geometry false
\use_package amsmath 1
\use_package amssymb 1
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\use_package mathdots 1
\use_package mathtools 1
\use_package mhchem 1
\use_package stackrel 1
\use_package stmaryrd 1
\use_package undertilde 1
\cite_engine natbib
\cite_engine_type authoryear
\biblio_style humannat
\use_bibtopic false
\use_indices false
\paperorientation portrait
\suppress_date false
\justification true
\use_refstyle 0
\use_minted 0
\index Index
\shortcut idx
\color #008000
\end_index
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
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\papersides 2
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\tracking_changes false
\output_changes false
\html_math_output 0
\html_css_as_file 0
\html_be_strict false
\end_header

\begin_body

\begin_layout Chapter
Chapter name
\end_layout

\begin_layout Standard
Because each dioxin, furan, and biphenyl congener has a different toxicity
 to organisms each congener's toxicity is related to what is accepted as
 the most toxic congener: 2,3,7,8-tetrachlorodibenzo-
\emph on
p
\emph default
-dioxin (TCDD).
 This is done using a toxicity equivalent weighting factor (TEF) determined
 by a group of experts for each class of organism 
\begin_inset CommandInset citation
LatexCommand citep
key "VandenBerg1998"
literal "true"

\end_inset

.
\end_layout

\begin_layout Standard
An example uses concentrations of trichloroethylene (TCE) in shallow ground
 waters of Long Island, NY 
\begin_inset CommandInset citation
LatexCommand citep
key "Eckhardt1989"
literal "true"

\end_inset

.
 
\end_layout

\begin_layout Standard
\begin_inset CommandInset bibtex
LatexCommand bibtex
btprint "btPrintCited"
bibfiles "/home/rshepard/documents/jabrefdb"
options "authordate4"

\end_inset


\end_layout

\end_body
\end_document


mwe.pdf
Description: Adobe PDF document
This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020 on Slackware 
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entering extended mode
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Package tocbasic Info: babel extension for `toc' omitted
(tocbasic) because o

Re: Changing from bibtex to biblatex

2020-09-18 Thread Rich Shepard

On Fri, 18 Sep 2020, Jürgen Spitzmüller wrote:


Biblatex has many fields that BibTeX typically doesn't have, and some
fileds have a different syntax. E.g., address takes and "and"-separated
list (Berlin and New York and Boston). However, Biblatex can deal with all
BibTeX fields and handle "classic" input.


Jürgen,

I noticed the extensive fields in the biblatex doc. My experiences with
references has limited multiple names to authors and editors. I've always
used 'and' between them which is why I was puzzled that JabRef's integrity
check displayed semi-colons in that field.


Biblatex expects normal dash {260-269}, which will be automatically
transfered to en-dash (or whatever the style wants) in output. {260--269}
in input works as well, but this won't be tranferred if the style requires
a different separator.


Okay. I've always used the double hyphen to tell LaTeX it should be an
en-dash. Apparently JabRef was confused with this. Shrug. I won't let this
application do an integrity check; if I see something wrong with how a
reference is listed I'll fix it then.

Thanks very much for the lesson.

Stay well and carpe weekend,

Rich

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Re: Changing from bibtex to biblatex

2020-09-18 Thread Jürgen Spitzmüller
Am Donnerstag, den 17.09.2020, 12:51 -0700 schrieb Rich Shepard:
> I reconfigured LyX to use biblatex rather than bibtex. Are there any
> differences in the structure of the *.bib file between the two?

Biblatex has many fields that BibTeX typically doesn't have, and some
fileds have a different syntax. E.g., address takes and "and"-separated 
list (Berlin and New York and Boston). However, Biblatex can deal with
all BibTeX fields and handle "classic" input.

> For the time being I'm sticking with JabRef-5.1 because I've been
> using it for years and I need to work with the contents rather than
> learning a new tool. And, I've learned that Ocular allows me to copy
> and paste from PDF-1.7 docs while the installed versions of xpdf and
> other PDF viewers won't.
> 
> Cleaning up the .bib file JabRef shows some duplicates and I've cut
> those out. But, when I do an integrity check it shows errors that are
> not in the .bib file itself.
> 
> Example: JabRef shows a list of authors with names separated by semi-
> colons Aazami, J.;Sari, A.E.; ... while the .bib file shows {Aazami,
> J. and Sari, A.E. and ... JabRef tells me that what it's displaying
> is not correct bibtex format. 

Yes, names must be and-separated (in both BibTeX and Biblatex).

> For that same article JabRef says it's missing page numbers but the
> .bib file shows pages = {260–-269},

Biblatex expects normal dash {260-269}, which will be automatically
transfered to en-dash (or whatever the style wants) in output. 
{260--269} in input works as well, but this won't be tranferred if the
style requires a different separator.

Jürgen

> 
> I don't recall seeing anything like this before.
> 
> All thoughts welcome,
> 
> Rich


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Changing from bibtex to biblatex

2020-09-17 Thread Rich Shepard

I reconfigured LyX to use biblatex rather than bibtex. Are there any
differences in the structure of the *.bib file between the two?

For the time being I'm sticking with JabRef-5.1 because I've been using it
for years and I need to work with the contents rather than learning a new
tool. And, I've learned that Ocular allows me to copy and paste from PDF-1.7
docs while the installed versions of xpdf and other PDF viewers won't.

Cleaning up the .bib file JabRef shows some duplicates and I've cut those
out. But, when I do an integrity check it shows errors that are not in the
.bib file itself.

Example: JabRef shows a list of authors with names separated by semi-colons
Aazami, J.;Sari, A.E.; ... while the .bib file shows {Aazami, J. and Sari, A.E.
and ... JabRef tells me that what it's displaying is not correct bibtex
format. For that same article JabRef says it's missing page numbers but the
.bib file shows pages = {260–-269},

I don't recall seeing anything like this before.

All thoughts welcome,

Rich
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Re: Hiding biblatex bibliography

2020-04-18 Thread Daniel

On 2020-04-17 16:35, Kornel Benko wrote:

Am Fri, 17 Apr 2020 15:36:21 +0200
schrieb Daniel :


On 2020-04-04 22:04, Richard Kimberly Heck wrote:

On 4/4/20 2:10 AM, Jürgen Spitzmüller wrote:

Am Freitag, den 03.04.2020, 15:49 -0400 schrieb Richard Kimberly Heck:

But will LyX still issue the relevant commands in the preamble? I'd
expect not, right?

Yes, it will. Only the \printbibliography in palce is hidden.


Hmm. That is the right solution then.

Riki


The solution seems non-obvious. Evidence are both the users and Riki's
questions and that I remember myself running into this a time ago. Maybe
there could be a checkbox in the bibliography settings inset to "Hide
bibliography"?

Daniel


What do you mean with 'Hide'?
Hide from lyx
or
Hide from LaTeX
or
Hide from user
?

Or better: "Don't show in output"?

Kornel


Yes, "Don't show in output" or shorter "Hide in output" seems good.

Daniel


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Re: Hiding biblatex bibliography

2020-04-17 Thread Kornel Benko
Am Fri, 17 Apr 2020 15:36:21 +0200
schrieb Daniel :

> On 2020-04-04 22:04, Richard Kimberly Heck wrote:
> > On 4/4/20 2:10 AM, Jürgen Spitzmüller wrote:  
> >> Am Freitag, den 03.04.2020, 15:49 -0400 schrieb Richard Kimberly Heck:  
> >>> But will LyX still issue the relevant commands in the preamble? I'd
> >>> expect not, right?  
> >> Yes, it will. Only the \printbibliography in palce is hidden.  
> >
> > Hmm. That is the right solution then.
> >
> > Riki  
> 
> The solution seems non-obvious. Evidence are both the users and Riki's
> questions and that I remember myself running into this a time ago. Maybe
> there could be a checkbox in the bibliography settings inset to "Hide
> bibliography"?
> 
> Daniel

What do you mean with 'Hide'?
Hide from lyx
or
Hide from LaTeX
or
Hide from user
?

Or better: "Don't show in output"?

Kornel


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Re: Hiding biblatex bibliography

2020-04-17 Thread Daniel

On 2020-04-04 22:04, Richard Kimberly Heck wrote:

On 4/4/20 2:10 AM, Jürgen Spitzmüller wrote:

Am Freitag, den 03.04.2020, 15:49 -0400 schrieb Richard Kimberly Heck:

But will LyX still issue the relevant commands in the preamble? I'd
expect not, right?

Yes, it will. Only the \printbibliography in palce is hidden.


Hmm. That is the right solution then.

Riki


The solution seems non-obvious. Evidence are both the users and Riki's 
questions and that I remember myself running into this a time ago. Maybe 
there could be a checkbox in the bibliography settings inset to "Hide 
bibliography"?


Daniel

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Re: Hiding biblatex bibliography

2020-04-04 Thread Richard Kimberly Heck
On 4/4/20 2:10 AM, Jürgen Spitzmüller wrote:
> Am Freitag, den 03.04.2020, 15:49 -0400 schrieb Richard Kimberly Heck:
>> But will LyX still issue the relevant commands in the preamble? I'd
>> expect not, right?
> Yes, it will. Only the \printbibliography in palce is hidden.

Hmm. That is the right solution then.

Riki


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Re: Hiding biblatex bibliography

2020-04-04 Thread Jürgen Spitzmüller
Am Freitag, den 03.04.2020, 15:49 -0400 schrieb Richard Kimberly Heck:
> But will LyX still issue the relevant commands in the preamble? I'd
> expect not, right?

Yes, it will. Only the \printbibliography in palce is hidden.

Jürgen


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Re: Hiding biblatex bibliography

2020-04-03 Thread Richard Kimberly Heck
On 4/3/20 1:55 AM, Jürgen Spitzmüller wrote:
> Am Donnerstag, den 02.04.2020, 22:04 +0200 schrieb Marcus Mikulcak:
>> for a number of citation styles (verbose and when citing full
>> bibliography entries), it would be great to be able to not print the
>> bibliography at the of the document, i.e., to have Lyx not issue the
>> \printbibliography command. But still use biblatex in general, of
>> course. 
>>
>> Is there any way to do this?
> Put the bibliography inset in a note inset.

But will LyX still issue the relevant commands in the preamble? I'd
expect not, right?

Riki


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Re: Hiding biblatex bibliography

2020-04-02 Thread Jürgen Spitzmüller
Am Donnerstag, den 02.04.2020, 22:04 +0200 schrieb Marcus Mikulcak:
> for a number of citation styles (verbose and when citing full
> bibliography entries), it would be great to be able to not print the
> bibliography at the of the document, i.e., to have Lyx not issue the
> \printbibliography command. But still use biblatex in general, of
> course. 
> 
> Is there any way to do this?

Put the bibliography inset in a note inset.

Jürgen


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