Re: Atlas compiling causes havoc

2012-05-20 Thread vincent habchi
On 20 mai 2012, at 08:03, Jasper Frumau jasperfru...@gmail.com wrote: I have been trying to upgrade all outdated ports for three days now. Bumped into several issues. Now I got stuck at Atlas. What’s your configuration? What port command did you execute to upgrade Atlas? V.

Re: Atlas compiling causes havoc

2012-05-20 Thread Jasper Frumau
sudo port upgrade outdated was the command I used and it requested for a new installation of Atlas. My MacPorts config is: # MacPorts system wide configuration file # $Id: macports.conf.in 55280 2009-08-08 02:45:30Z j...@macports.org $ # Set the directory in which to install ports prefix

Re: Atlas compiling causes havoc

2012-05-20 Thread Vincent Habchi
Jasper, MacPorts config is: […] That’s not a configuration problem, it is just a matter of what exactly the port upgrade has done. Try to update manually (port -v install atlas +gcc45). Atlas can take a very long time to build if you don’t choose one of the GCC compilers with x86_64 arch.

Re: Atlas compiling causes havoc

2012-05-20 Thread Daniel J. Luke
On May 20, 2012, at 2:03 AM, Jasper Frumau wrote: The terminal was using 1.5 GB memory!! Restarting the terminal made the terminal go wild and use ± 1.7 GB to 2 GB memory and freeze on me. Terminal Preferences - Settings - Window - Scrollback Change from Limit to available memory to Limit

Re: Atlas compiling causes havoc

2012-05-20 Thread Jasper Frumau
Thanks for that. On Sun, May 20, 2012 at 2:23 PM, Daniel J. Luke dl...@geeklair.net wrote: On May 20, 2012, at 2:03 AM, Jasper Frumau wrote: The terminal was using 1.5 GB memory!! Restarting the terminal made the terminal go wild and use ± 1.7 GB to 2 GB memory and freeze on me. Terminal

Re: Atlas compiling causes havoc

2012-05-20 Thread Ryan Schmidt
On May 20, 2012, at 01:03, Jasper Frumau wrote: My question is. Do you think I can dump Atlas and all its dependencies? If you have no recollection of needing or wanting atlas (or another port), feel free to sudo port uninstall it. If atlas is a dependency of something you've installed,

Re: Atlas compiling causes havoc

2012-05-20 Thread Jasper Frumau
On Sun, May 20, 2012 at 2:20 PM, Vincent Habchi vi...@macports.org wrote: Jasper, MacPorts config is: […] That’s not a configuration problem, it is just a matter of what exactly the port upgrade has done. Try to update manually (port -v install atlas +gcc45). Will do that tonight.

Re: Atlas compiling causes havoc

2012-05-20 Thread Jasper Frumau
Going through all this Ryan. Thanks for all this! On Sun, May 20, 2012 at 2:41 PM, Ryan Schmidt ryandes...@macports.orgwrote: On May 20, 2012, at 01:03, Jasper Frumau wrote: My question is. Do you think I can dump Atlas and all its dependencies? If you have no recollection of needing or

Re: Atlas compiling causes havoc

2012-05-20 Thread Jasper Frumau
You may also want to use the leaves feature. Leaves are the ports MacPorts installed as dependencies but that you didn't specifically ask for. The opposite of leaves are the requested ports—the ones you actually sudo port installed by name. You can use: port installed requested I

Re: Atlas compiling causes havoc

2012-05-20 Thread Vincent Habchi
Jasper, I checked py25-numpy: […] You can build pyXX-numpy and pyXX-scipy without relying on Atlas. Just don’t select the +atlas variant. I’d interested in knowing what variant gives the best performance, by the way. Vincent ___ macports-users

Re: Atlas compiling causes havoc

2012-05-20 Thread Jasper Frumau
On Sun, May 20, 2012 at 3:21 PM, Vincent Habchi vi...@macports.org wrote: Jasper, I checked py25-numpy: […] You can build pyXX-numpy and pyXX-scipy without relying on Atlas. Just don’t select the +atlas variant. I’d interested in knowing what variant gives the best performance, by the

Re: Atlas compiling causes havoc

2012-05-20 Thread Vincent Habchi
On 20 mai 2012, at 10:21, Jasper Frumau jasperfru...@gmail.com wrote: Could I force uninstall them and then install them without atlas. How? 'port -f uninstall py25-numpy' then 'port install py25-numpy' (without +atlas). Vincent ___ macports-users

Re: Atlas compiling causes havoc

2012-05-20 Thread Jasper Frumau
Did that and removed Atlas. Now doing another sudo port upgrade outdated. Thanks again everyone! On Sun, May 20, 2012 at 3:23 PM, Vincent Habchi vi...@macports.org wrote: On 20 mai 2012, at 10:21, Jasper Frumau jasperfru...@gmail.com wrote: Could I force uninstall them and then install them

Re: Atlas compiling causes havoc

2012-05-20 Thread Ryan Schmidt
On May 20, 2012, at 03:11, Jasper Frumau wrote: You can use: port installed requested I did sudo port install requested first, which seems to have fixed some linking issues. Doesn't really make any sense to run that; you're asking MacPorts to install ports you already have installed.