Re: clamav and bzip2

2012-02-22 Thread Jeremy Lavergne
   Having performed software update a number of times what else must I do? Is 
 a later Xcode archived?

From:
http://guide.macports.org/#installing.xcode

Always make sure to install the latest available version of Xcode for your Mac 
OS X release (with the exception of Xcode 4.3, for now); using outdated 
versions of Xcode may cause port install failures. Also note that Xcode is not 
updated via Mac OS X's Software Update utility on OS versions prior to 10.6, 
and is updated via the Mac App Store on 10.7.

You can find all Xcode downloads through connect.apple.com.



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Re: clamav and bzip2

2012-02-22 Thread Daniel J. Luke
On Feb 22, 2012, at 10:11 AM, John Brown wrote:
 Error: On Mac OS X 10.4, zlib 1.2.6 requires Xcode 2.4.1 or later but you 
 have Xcode 2.3.
 Error: See http://guide.macports.org/chunked/installing.xcode.html for 
 download links.
 Error: Target org.macports.extract returned: incompatible Xcode version
 Error: Failed to install zlib

Did you follow that link? The guide has a link specifically for you to get the 
latest Xcode for 10.4 (guide section 2.2.3)

--
Daniel J. Luke  
 
++  
  
| * dl...@geeklair.net * |  

| *-- http://www.geeklair.net -* |  

++  
  
|   Opinions expressed are mine and do not necessarily   |  

|  reflect the opinions of my employer.  |  

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Re: clamav and bzip2

2012-02-22 Thread John Brown



Daniel J. Luke wrote:

On Feb 22, 2012, at 2:29 AM, John Brown wrote:
  

Warning: The installed version of Xcode (2.3) is known to cause problems. 
Version 2.5 or later is recommended on Mac OS X 10.4.



this warning is printed for a reason, you should upgrade Xcode.

  

---  Verifying checksum(s) for bzip2
Error: Checksum (md5) mismatch for bzip2-1.0.6.tar.gz
Error: Checksum (sha1) mismatch for bzip2-1.0.6.tar.gz
Error: Checksum (rmd160) mismatch for bzip2-1.0.6.tar.gz
***
The non-matching file appears to be HTML. See this page for possible reasons
for the checksum mismatch:
https://trac.macports.org/wiki/MisbehavingServers
***



This message is also printed for a reason, did you follow that link and read what was there? 


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++
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++
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|  reflect the opinions of my employer.  |  
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Yes, I followed the link.

Shalom,

John B Brown
j...@vcn.com
358 High Street
Buffalo, Wyoming
82834

Freedom is not worth having if it does not include
the freedom to make mistakes Mahatma Gandhi
There was never a good war, or a bad peace.
Benjamin Franklin
I wonder whether the world is being run
by smart people who are putting us on
or by imbeciles who really mean it. Mark Twain

1-307-684-9068


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Re: problem to install apr-util in OSX 10.8?

2012-02-22 Thread Ryan Schmidt
On Feb 22, 2012, at 10:08, Giovanni Lovato wrote:

 Jeremy Lavergne wrote:
 
 Log for apr-util is at: /opt/local/var/macports/logs/.../apr-util/main.log
 
 We cannot help you without this log file.
 
 I have the same issue with OS X 10.8, XCode 4.4, fresh MP trunk install:

Most of us do not have the pre-releases of OS X 10.8 or Xcode 4.4, and you may 
be prohibited from discussing it publicly due to your non-disclosure agreement.

 building apr-util fails on
 
 :info:build /bin/sh /opt/local/share/apr-1/build/libtool --silent --mode=link
 /usr/bin/clang -pipe -O2 -arch x86_64   -L/opt/local/lib -arch x86_64
 -L/opt/local/lib/db46 -L/opt/local/lib -release 1 -module -rpath
 /opt/local/lib/apr-util-1 -o dbd/apr_dbd_sqlite3.la dbd/apr_dbd_sqlite3.lo
 -L/opt/local/lib  -lsqlite3
 :info:build clang: error: unable to execute command: Segmentation fault: 11
 :info:build clang: error: linker command failed due to signal 2 (use -v to
 see invocation)
 
 Here's the full log: http://pastebin.com/0fMbwTSP 

The full error message reads:

:info:build clang: error: unable to execute command: Segmentation fault: 11
:info:build clang: error: linker command failed due to signal 2 (use -v to see 
invocation)
:info:build clang: note: diagnostic msg: Please submit a bug report to 
http://developer.apple.com/bugreporter/ and include command line arguments and 
all diagnostic information.
:info:build clang: note: diagnostic msg: Error generating preprocessed 
source(s) - cannot generate preprocessed source with multiple -arch options.

So please do that.

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Re: Help please

2012-02-22 Thread Ryan Schmidt

On Feb 21, 2012, at 22:44, James Linder wrote:

 checking for Apple Objective-C runtime... yes
 checking for GNU Objective C runtime... no
 configure: Using Apple Objective-C runtime
 checking for Apple Foundation library... no
 configure: WARNING: GNUSTEP_SYSTEM_ROOT is not defined in your 
 environment, preventing the use of GNUstep's Foundation library
 configure: error: Could not find a working Foundation implementation
 
 This is an error we've encountered a few times before, such as:
 
 https://trac.macports.org/ticket/28452
 
 https://trac.macports.org/ticket/30298
 
 We didn't receive further feedback from the reporters so were unable to 
 pursue the matter further. Can you attach your config.log? Maybe it will 
 shed further light.
 
 In #28452 we presumed software installed in /usr/local was interfering. Do 
 you have anything installed in /usr/local? If so, remove it and try again.
 
 In #30298 we presumed the user's operating system components had become 
 damaged and the OS should be reinstalled. So that's another avenue you 
 could pursue.
 
 haycorn:~ # ls /usr/local
 .git Library etc share
 .gitignore   README.md   include texlive
 Cellar   bin lib
 
 This was put here by latex install ...
 
 haycorn:~ # mv /usr/local/ /usr/oldlocal
 haycorn:~ # port -d selfupdate
 [snip]
 Error: /opt/local/bin/port: port selfupdate failed: Error installing new 
 MacPorts base: shell command failed (see log for details)
 
 OK it'll take me a day or so to backup everything I want, so reinstall 
 (which will certainly work, it did work before) and I'll report back
 
 Snow Leopard and install CD: Insert CD 'Instal Mac OS X': whirr whirr (1 
 hour) {but this way is very easy)
 
 then
 
 ...
 DEBUG: Error installing new MacPorts base: shell command failed (see log for 
 details)
  while executing
 macports::selfupdate [array get global_options] base_updated
 Error: /opt/local/bin/port: port selfupdate failed: Error installing new 
 MacPorts base: shell command failed (see log for details)

That portion of the error doesn't tell us anything other than something went 
wrong. If you check back further in the log, was it the same Could not find a 
working Foundation implementation error?


 OK next I'll format the disk then install and report

I would not have suggested that as the next step, but then again I have no 
further suggestions, so if you do this, let us know if it helps.


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Re: gcc et al without XCode

2012-02-22 Thread Ryan Schmidt

On Feb 21, 2012, at 11:08, Craig Treleaven wrote:

 Haven't tried it, but Apple has released a new package that installs Apple's 
 tools and SDK's without having to download and install the full XCode app.
 
 http://www.kennethreitz.com/xcode-gcc-and-homebrew.html

Yes they have. But as always, MacPorts will require both those and Xcode; we're 
not changing that.


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Re: Still no Universal variant for NSS?

2012-02-22 Thread Ryan Schmidt

On Feb 21, 2012, at 12:38, Greg Earle wrote:

 I wanted to update WINE-devel via MacPorts but was told my ports were out of 
 date when I ran sudo port update wine-devel.
 
 I've migrated my system from a 32-bit (only) old MacBook Pro to a 
 present-model Mac Pro running in full 64-bit mode.
 
 When I ran sudo port selfupdate it converted me from 1.9.2 to 2.0.3.  (Oops)

Why oops? That's what selfupdate is supposed to do -- update MacPorts base 
to the latest version, and update your portfile definitions.

MacPorts 2 was released a long time ago. In the future, please do not wait so 
long to selfupdate.


 I soon had problems with programs crashing so I said the heck with it and 
 reinstalled 2.0.3 from DMG.

Indeed; the migration instructions state that you must reinstall MacPorts and 
all ports when you migrate to a new machine with a different OS version or 
processor architecture.


 I then decided to try the
 
 sudo port -qv installed  /tmp/installed_ports.txt
 sudo port -fp uninstall --follow-dependents installed
 sudo port clean all
 curl -O 
 http://svn.macports.org/repository/macports/contrib/restore_ports/restore_ports.tcl
 chmod +x restore_ports.tcl
 sudo ./restore_ports.tcl /tmp/installed_ports.txt
 
 method described in the migration FAQ.

Right, that should reinstall all your ports.


 It was humming along quite nicely until it got to xulrunner:
 
 --
 [...]
 ---  Activating libcanberra @0.28_0+universal
 ---  Cleaning libcanberra
 Error: Cannot install xulrunner for the arch(s) 'i386' because
 Error: its dependency nss is only installed for the arch 'x86_64'
 Error: and does not have a universal variant.
 architecture mismatch
while executing
 macports::_upgrade_mport_deps $mport $target
(procedure mportexec line 33)
invoked from within
 mportexec $workername $install_target
 Unable to execute target 'install' for port 'xulrunner': architecture mismatch
while executing
 install_ports $operationList
(file ./restore_ports.tcl line 269)
 
 [21:39] nightowl:/tmp % sudo port installed nss
 Password:
 The following ports are currently installed:
  nss @3.13.1_0 (active)
 
 [21:47] nightowl:/tmp % lipo -info /opt/local/lib/nss/libnss3.dylib
 Non-fat file: /opt/local/lib/nss/libnss3.dylib is architecture: x86_64
 
 [21:47] nightowl:/tmp % grep firefox /tmp/installed_ports 
  firefox-x11 @3.6.13_0 platform='darwin 10' archs='i386'
  firefox-x11 @3.6.15_0 platform='darwin 10' archs='i386'
  firefox-x11 @3.6.16_0 (active) platform='darwin 10' archs='i386'
 
 [21:48] nightowl:/tmp % sudo port installed firefox
 None of the specified ports are installed.
 
 [21:48] nightowl:/tmp % sudo port installed firefox-x11
 None of the specified ports are installed.
 
 [21:48] nightowl:/tmp % sudo port installed firefox-x11-devel
 None of the specified ports are installed.
 --
 
 This looks suspiciously like Ticket #23424 - nss: add universal variant and 
 support for build_arch
 
 https://trac.macports.org/ticket/23424
 
 which looks like a 2-year-old ticket that has had no fix/movement on in well 
 over a year.
 
 Am I hosed?
 

 Should I try 'cheating' and change the firefox-x11 to firefox-x11-devel 
 in my installed_ports.txt file and run it again?


The current version of the firefox-x11 port does not appear to have a 
dependency on nss or xulrunner so try removing those from your 
installed_ports.txt.

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error using MacPorts zlib, not present with system zlib?

2012-02-22 Thread Adam Mercer
Hi

Not sure of the correct place to discuss this but in tracking down a
build issue with a port I've found an interesting issue with MacPorts
zlib.

This simple test code illustrates the problem:

[ram@mimir tmp]$ cat test.c
#include stdio.h
#include stdlib.h
#include zlib.h

int main(void)
{
  void *file;
  int c;

  file = gzopen(test.dat.gz, r);
  if (file == Z_NULL)
  {
fprintf(stderr, unable to open file\n);
exit(1);
  }

  c = gzgetc(file);

  fprintf(stdout, c = %c\n, c);

  gzclose(file);
}
[ram@mimir tmp]$ zcat test.dat.gz
test
file

If I compile this against the system zlib then it works as expected:

[ram@mimir tmp]$ clang -o test test.c -lz
[ram@mimir tmp]$ ./test
c = t

But not against the MacPorts zlib:

[ram@mimir tmp]$ clang -o test test.c -I/opt/local/include -L/opt/local/lib -lz
test.c:17:7: error: member reference base type 'void' is not a structure or
  union
  c = gzgetc(file);
  ^~~~
/opt/local/include/zlib.h:1655:11: note: instantiated from:
((g)-have ? ((g)-have--, (g)-pos++, *((g)-next)++) : gzgetc_(g))
 ~~~  ^
test.c:17:7: error: member reference base type 'void' is not a structure or
  union
  c = gzgetc(file);
  ^~~~
/opt/local/include/zlib.h:1655:24: note: instantiated from:
((g)-have ? ((g)-have--, (g)-pos++, *((g)-next)++) : gzgetc_(g))
  ~~~  ^
test.c:17:7: error: member reference base type 'void' is not a structure or
  union
  c = gzgetc(file);
  ^~~~
/opt/local/include/zlib.h:1655:37: note: instantiated from:
((g)-have ? ((g)-have--, (g)-pos++, *((g)-next)++) : gzgetc_(g))
   ~~~  ^
test.c:17:7: error: member reference base type 'void' is not a structure or
  union
  c = gzgetc(file);
  ^~~~
/opt/local/include/zlib.h:1655:51: note: instantiated from:
((g)-have ? ((g)-have--, (g)-pos++, *((g)-next)++) : gzgetc_(g))
 ~~~  ^
4 errors generated.
[ram@mimir tmp]$

Does anyone know why MacPorts zlib treats this as an error but the
system version doesn't?

Cheers

Adam
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Re: error using MacPorts zlib, not present with system zlib?

2012-02-22 Thread Eric Cronin

On 22.02.2012 15:32, Adam Mercer wrote:

Hi

Not sure of the correct place to discuss this but in tracking down a
build issue with a port I've found an interesting issue with MacPorts
zlib.

This simple test code illustrates the problem:

[ram@mimir tmp]$ cat test.c
#include stdio.h
#include stdlib.h
#include zlib.h

int main(void)
{
  void *file;


snip


  c = gzgetc(file);


This code is wrong.  The zlib documentation says gzgetc takes a gzFile* 
not a void*.




Does anyone know why MacPorts zlib treats this as an error but the
system version doesn't?


I'm not near a Mac right now, but I believe the system version of zlib 
is pretty ancient.  In version 1.2.4 there was a Wholesale replacement 
of gz* functions with faster versions according to zlib.net, one of 
which I suspect was the replacement of the gzgetc() function with a 
macro.


C treats void* very unsafely, silently converting it to and from other 
pointer types whenever it knows how.  So converting the gzFile* gzopen() 
returned to the void* 'file' is legal.  Then, if gzgetc() is an actual 
function declared as 'char gzgetc(gzFile*)' the compiler will allow the 
void* be passed to the function, and within the function it is treated 
as a gzFile*.  But if gzgetc is just a macro the compiler doesn't know 
to convert 'file' to a gzFile*, so you get errors about trying to treat 
void as struct/union.  If the API said gzgetc took a void* they would 
fix this by casting g to a gzFile* inside the macro that replaced the 
function, but the API doesn't say this, and so the zlib authors don't... 
The current version is actually both faster and safer since it catches 
this type of void* abuse.


So tldr answer: patch the port using libz to use a gzFile* or to cast 
the void* gack to a gzFile* before calling functions expecting a 
gzFile*.


Thanks,
Eric
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Re: error using MacPorts zlib, not present with system zlib?

2012-02-22 Thread Adam Mercer
On Wed, Feb 22, 2012 at 15:50, Eric Cronin ecro...@macports.org wrote:

 I'm not near a Mac right now, but I believe the system version of zlib is
 pretty ancient.  In version 1.2.4 there was a Wholesale replacement of gz*
 functions with faster versions according to zlib.net, one of which I
 suspect was the replacement of the gzgetc() function with a macro.

Looks like it, Lion seems to have zlib 1.2.5 which has a standard
fucntion prototype for the gzgetc() function whereas 1.2.6 in MacPorts
gzgetc() is indeed a macro.

 C treats void* very unsafely, silently converting it to and from other
 pointer types whenever it knows how.  So converting the gzFile* gzopen()
 returned to the void* 'file' is legal.  Then, if gzgetc() is an actual
 function declared as 'char gzgetc(gzFile*)' the compiler will allow the
 void* be passed to the function, and within the function it is treated as a
 gzFile*.  But if gzgetc is just a macro the compiler doesn't know to convert
 'file' to a gzFile*, so you get errors about trying to treat void as
 struct/union.  If the API said gzgetc took a void* they would fix this by
 casting g to a gzFile* inside the macro that replaced the function, but
 the API doesn't say this, and so the zlib authors don't... The current
 version is actually both faster and safer since it catches this type of
 void* abuse.

 So tldr answer: patch the port using libz to use a gzFile* or to cast the
 void* gack to a gzFile* before calling functions expecting a gzFile*.

I ended up applying a patch to the port that casts the void* pointer
to gzFile and that allows it to build, but the upstream developer
didn't like that approach. But this analysis is interesting and
imagine this build error will be seen on other platforms that have
zlib-1.2.6.

Thanks for the help.

Cheers

Adam
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Debian-like rename utility - available via MacPorts?

2012-02-22 Thread Sam Kuper
Dear all,

If I'm not mistaken, in Debian Linux ( Ubuntu, etc), there is a
rename utility, which I think comes from Debian's Perl package. It
allows file renaming using regular expressions, as described in Jens
Dreger's post here[1].

Apparently it (or something very much like it) is now available for
Mac users via Brew.[2]

However, I'm not a Brew user, I'm a MacPorts user. Please can you tell
me if this utility is available via MacPorts?

The closest I've found so far is renameutils, which IMO doesn't
offer anything like the same ease of use, and isn't what I'm looking
for at all.

I haven't yet tried installing any of MacPorts's Perl packages,
because in order to exhaustively check all of them for whether they
include the rename utility, I'd potentially have to install several
of them!

In any case, it would be much better if MacPorts users could simply
get rename by running port install rename much as Brew users can
apparently get it by running brew install rename[2].

I did do a web search before posting this message and this topic
doesn't seem to have been discussed before, but if my google-fu failed
me and it *has* already been discussed, please feel free to point me
to the relevant discussion.

Thanks in advance for your comments and assistance,

Sam

[1] https://answers.launchpad.net/ubuntu/+source/nautilus/+question/2309
[2] 
http://superuser.com/questions/152627/renaming-many-files-in-mac-os-x-batch-processing
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Re: Help please

2012-02-22 Thread James Linder

On 23/02/2012, at 1:07 AM, Ryan Schmidt wrote:

 
 On Feb 21, 2012, at 22:44, James Linder wrote:
 
 checking for Apple Objective-C runtime... yes
 checking for GNU Objective C runtime... no
 configure: Using Apple Objective-C runtime
 checking for Apple Foundation library... no
 configure: WARNING: GNUSTEP_SYSTEM_ROOT is not defined in your 
 environment, preventing the use of GNUstep's Foundation library
 configure: error: Could not find a working Foundation implementation
 
 This is an error we've encountered a few times before, such as:
 
 https://trac.macports.org/ticket/28452
 
 https://trac.macports.org/ticket/30298
 
 We didn't receive further feedback from the reporters so were unable to 
 pursue the matter further. Can you attach your config.log? Maybe it will 
 shed further light.
 
 In #28452 we presumed software installed in /usr/local was interfering. Do 
 you have anything installed in /usr/local? If so, remove it and try again.
 
 In #30298 we presumed the user's operating system components had become 
 damaged and the OS should be reinstalled. So that's another avenue you 
 could pursue.
 
 haycorn:~ # ls /usr/local
 .gitLibrary etc share
 .gitignore  README.md   include texlive
 Cellar  bin lib
 
 This was put here by latex install ...
 
 haycorn:~ # mv /usr/local/ /usr/oldlocal
 haycorn:~ # port -d selfupdate
 [snip]
 Error: /opt/local/bin/port: port selfupdate failed: Error installing new 
 MacPorts base: shell command failed (see log for details)
 
 OK it'll take me a day or so to backup everything I want, so reinstall 
 (which will certainly work, it did work before) and I'll report back
 
 Snow Leopard and install CD: Insert CD 'Instal Mac OS X': whirr whirr (1 
 hour) {but this way is very easy)
 
 then
 
 ...
 DEBUG: Error installing new MacPorts base: shell command failed (see log for 
 details)
 while executing
 macports::selfupdate [array get global_options] base_updated
 Error: /opt/local/bin/port: port selfupdate failed: Error installing new 
 MacPorts base: shell command failed (see log for details)
 
 That portion of the error doesn't tell us anything other than something went 
 wrong. If you check back further in the log, was it the same Could not find 
 a working Foundation implementation error?

Aaaargh hangs head in shame! I had not reinstalled Xcode.

So
Reinstall OS
install Xcode

Everything running sweetly again.
Thanks for all the help.
James
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Re: Debian-like rename utility - available via MacPorts?

2012-02-22 Thread Dan Ports
On Wed, Feb 22, 2012 at 11:33:50PM +, Sam Kuper wrote:
 If I'm not mistaken, in Debian Linux ( Ubuntu, etc), there is a
 rename utility, which I think comes from Debian's Perl package. It
 allows file renaming using regular expressions, as described in Jens
 Dreger's post here[1].
[...]
 In any case, it would be much better if MacPorts users could simply
 get rename by running port install rename much as Brew users can
 apparently get it by running brew install rename[2].

Sounds like a useful thing to have. I just added the p5-file-rename
port, which is a newer version of that script. It installs both a perl
module and a command-line script `file-rename`.

Dan

-- 
Dan R. K. Ports  MIT CSAILhttp://drkp.net/
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Re: error using MacPorts zlib, not present with system zlib?

2012-02-22 Thread Mike Alexander
--On February 22, 2012 4:50:52 PM -0500 Eric Cronin 
ecro...@macports.org wrote:



This code is wrong.  The zlib documentation says gzgetc takes a
gzFile* not a void*.


Your analysis of this is correct except for one minor point.  gzopen 
returns and gzgetc (and others) take a gzFile not a gzFile*.  The 
definition of gzFile is



 typedef struct gzFile_s *gzFile;

so it's defined as a pointer.  Some compilers at some warning levels 
get annoyed if you use a gzFile* instead of gzFile for these parameters.


   Mike

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Re: error using MacPorts zlib, not present with system zlib?

2012-02-22 Thread Brandon Allbery
On Wed, Feb 22, 2012 at 21:36, Mike Alexander m...@umich.edu wrote:

 --On February 22, 2012 4:50:52 PM -0500 Eric Cronin ecro...@macports.org
 wrote:

 This code is wrong.  The zlib documentation says gzgetc takes a
 gzFile* not a void*.


  typedef struct gzFile_s *gzFile;

 so it's defined as a pointer.  Some compilers at some warning levels get
 annoyed if you use a gzFile* instead of gzFile for these parameters.


As they well should.

-- 
brandon s allbery  allber...@gmail.com
wandering unix systems administrator (available) (412) 475-9364 vm/sms
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