Looking at the autoconf m4 files from /opt/local/share/autoconf/autoconf, I find two with lists of X11. autoconf.m4f, a generated file, and libs.m4, from which I assume autoconf.m4f was generated, have the following lists of X11 directories. ac_x_header_dirs=' /usr/X11/include /usr/X11R7/include /usr/X11R6/include /usr/X11R5/include /usr/X11R4/include
/usr/include/X11 /usr/include/X11R7 /usr/include/X11R6 /usr/include/X11R5 /usr/include/X11R4 /usr/local/X11/include /usr/local/X11R7/include /usr/local/X11R6/include /usr/local/X11R5/include /usr/local/X11R4/include /usr/local/include/X11 /usr/local/include/X11R7 /usr/local/include/X11R6 /usr/local/include/X11R5 /usr/local/include/X11R4 /usr/X386/include /usr/x386/include /usr/XFree86/include/X11 /usr/include /usr/local/include /usr/unsupported/include /usr/athena/include /usr/local/x11r5/include /usr/lpp/Xamples/include /usr/openwin/include /usr/openwin/share/include' No /opt/local directories here. Is this a limitation that can be overriden in arguments to configure? I tried autoconf -B /opt/local/include/X11 -B /opt/local/lib but the configure comes out the same size, and when run tells me X11 not found. Does the libs.m4 need to be tweaked? Peter > On 21 Jan 2021, at 9:32 am, Peter West <li...@pbw.id.au> wrote: > > I tried specifically building rgl from source. The source is available at > https://cran.r-project.org/src/contrib/rgl_0.104.16.tar.gz. > > In R.app console, remove rgl package. > > > remove.packages(“rgl”) > > install.packages(<path-to-source.tar.gz>, repos = NULL, type = “source”) > > It doesn’t find X, so it skips OpenGL; configure in the source needs > tinkering. > > Peter > > -- > Peter West > p...@pbw.id.au > “So the Son of Man is lord even of the Sabbath..” > > >> On 19 Jan 2021, at 4:38 pm, Peter West <li...@pbw.id.au> wrote: >> >> $ sudo port install xorg-server >> $ sudo port install R >> $ sudo port install R-app >> >> >> Start MacPorts>R.app >> >> In the R.app console >> >> > install.packages(“rgl”) >> >> This will involve a lot of compilation. The OpenMP problem seems to have >> been resolved by using the compiler /opt/local/bin/clang++-mp-9.0, and you >> will see plenty of this. >> >> When that finishes, in the console >> >> > library(rgl) >> >> I get >> This build of rgl does not include OpenGL functions. Use >> rglwidget() to display results, e.g. via options(rgl.printRglwidget = TRUE). >> >> So I should get output that way, but I’m curious about the “native” way of >> doing it. >> >> Peter >> >> >> -- >> Peter West >> p...@pbw.id.au >> “So the Son of Man is lord even of the Sabbath..” >> >>> On 19 Jan 2021, at 12:58 pm, Ryan Schmidt <ryandes...@macports.org> wrote: >>> >>> >>> >>> On Jan 18, 2021, at 04:56, Peter West wrote: >>> >>>> I’ve removed XQuartz (again), and installed R and R-app from MacPorts. The >>>> R install warned me that >>>> Clang compilers provided by Xcode do not support OpenMP. Some R packages >>>> using OpenMP may require additional >>>> flags in the Makevar file (e.g. data.table) to build. Please consult >>>> package documentation. >>>> >>>> I install.package’d data.table without whinging, then did the same for >>>> rgl. It built, but when I loaded the library, I was informed that >>>> This build of rgl does not include OpenGL functions. >>>> >>>> Looking around for mentions of OpenGL, I couldn’t se anything that looked >>>> like an OpenGL library. >>> >>> I don't know anything about R or rgl. I tried "port search rgl" and I'm not >>> sure if any of those are what you're referring to. >>> >>> If you can provide an exact step-by-step list of commands to run to observe >>> the problem, then I could try them on my system and see if I can figure out >>> what needs to be changed. >>> >> > -- Peter West p...@pbw.id.au And whenever the unclean spirits saw him, they fell down before him and cried out, “You are the Son of God.”
