Re: HDF5 Problem

We were almost out of version issues, until the latest selfupdate yesterday The problem is that the netcdf-C library (/opt/local/lib/libnetcdf.dylib) is now trying to dynamically link to the HDF5 1.10 library in /opt/local/lib. It should instead be linking to the HDF5 1.8.x library in /opt/lo

Re: HDF5 Problem

> On Oct 13, 2016, at 11:32 AM, Ryan Schmidt wrote: > >> >> On Oct 13, 2016, at 10:14 AM, Adam Dershowitz wrote: >> >> I just updated hdf5 and hdf5-18: >> >> hdf5 1.10.0_1 < 1.10.0-patch1_0 >> hdf5-181.8.16_6 < 1.8.17_0 >> >> Now

Re: HDF5 Problem

>> Warning! ***HDF5 library version mismatched error*** >> Headers are 1.8.16, library is 1.8.17 Revbump of netcdf r153927 should fix the header/library version mismatch. I should have done this with r153822. Sorry. cf #51778. Takeshi ___ macports-us

Re: HDF5 Problem

This ticket is showing the same error, although the situation is slightly different, since it is using the older version that worked fine for me: https://trac.macports.org/ticket/52289 --Adam > On Oct 13, 2016, at 12:07 PM, Ryan Schmidt wrote: > > >

Re: HDF5 Problem

> On Oct 13, 2016, at 11:05 AM, Eric A. Borisch wrote: > > As the error message points out, you can set HDF5_DISABLE_VERSION_CHECK=1 (or > 2) to make things run. As they say, don't blame them if it crashes. > > There are plenty of reports out there (outside of MP) on this HDF5 feature. > As f

Re: HDF5 Problem

As the error message points out, you can set HDF5_DISABLE_VERSION_CHECK=1 (or 2) to make things run. As they say, don't blame them if it crashes. There are plenty of reports out there (outside of MP) on this HDF5 feature. As far as I can tell, the HDF5 group's position is that they are used for st

Re: HDF5 Problem

> On Oct 13, 2016, at 10:14 AM, Adam Dershowitz wrote: > > I just updated hdf5 and hdf5-18: > > hdf5 1.10.0_1 < 1.10.0-patch1_0 > hdf5-181.8.16_6 < 1.8.17_0 > > Now when I try to use pandas to open an HDF5 file I get this error: > >