[mart-dev] orthologs/possible orthologs at BioMart

2010-10-12 Thread Philip Kensche
Hi all, I was wondering about the categories orthologs and possible orthologs in BioMart. I want to retrieve orthologous gene pairs for mouse and human but find that one important protein is not in the ortholog table but in the possible ortholog table. So, what is the difference between the

Re: [mart-dev] orthologs/possible orthologs at BioMart

2010-10-12 Thread Arek Kasprzyk
Hi Philip For the information about ensembl data Please contact ensembl directly (helpd...@ensembl.org) a On 2010-10-12, at 6:11, Philip Kensche pkens...@cmbi.ru.nl wrote: Hi all, I was wondering about the categories orthologs and possible orthologs in BioMart. I want to retrieve

Re: [mart-dev] Problem retrieving datasets for mart uniprot_mart

2010-10-12 Thread Damian Smedley
Hi Nelson, Probably the configuration has lost its type setting on the DatasetConfig node. It should be set to TableSet. Do you see this in MartEditor? If you can't see it then something may have gone wrong in the export process - I can come and find you in person and help you fix it. Cheers