[matplotlib-devel] Location of bleeding edge repository

2011-03-07 Thread Paul Hobson
Is it in git or svn? I just cloned and installed from git using: git clone git://github.com/astraw/matplotlib.git cd matplotlib sudo python setupegg.py develop Starting ipython, and importing matplotlib, I get: In [2]: matplotlib.__version__ Out[2]: '1.0.0' I thought v1.0.1 was available. Should

Re: [matplotlib-devel] Location of bleeding edge repository

2011-03-08 Thread Paul Hobson
Thanks, Scott. That's a huge help. -p On Tue, Mar 8, 2011 at 12:49 AM, Scott Sinclair scott.sinclair...@gmail.com wrote: On 8 March 2011 09:40, Paul Hobson pmhob...@gmail.com wrote: Is it in git or svn? I just cloned and installed from git using: git clone git://github.com/astraw

[matplotlib-devel] Code review request: minor modifications to axes.boxplot

2011-12-08 Thread Paul Hobson
Matplotlib gurus: I took at stab at the git work flow and incorporated my personal modifications to the boxplot function. Github's diff can be found here: https://github.com/phobson/matplotlib/compare/master...manual_boxplots In summary, if your data is MxN, you can manually specify medians and

Re: [matplotlib-devel] Code review request: minor modifications to axes.boxplot

2011-12-09 Thread Paul Hobson
series as I would use it). I'll try to bang that out this weekend while this is still fresh. -p On Fri, Dec 9, 2011 at 1:29 PM, Benjamin Root ben.r...@ou.edu wrote: On Thu, Dec 8, 2011 at 10:45 AM, Paul Hobson pmhob...@gmail.com wrote: Matplotlib gurus: I took at stab at the git work flow

Re: [matplotlib-devel] re lease schedule for next version

2012-03-02 Thread Paul Hobson
I'll be more than happy to provide similar help testing on Windows 7. -paul On Sun, Feb 26, 2012 at 5:52 PM, John Hunter jdh2...@gmail.com wrote: On Sun, Feb 26, 2012 at 6:16 PM, Mark Lawrence breamore...@yahoo.co.uk wrote: On 25/02/2012 17:13, John Hunter wrote: After we get the bugfix

Re: [matplotlib-devel] Q-Q Plot

2012-08-15 Thread Paul Hobson
Damon, When the current state of the relevant python libraries, scipy is required to create a QQ plot. Therefore, matplotib will never be able to natively make QQ or probability plots. I've got a PR into the the statsmodels project to do just what you need (and more!).

Re: [matplotlib-devel] 1.2.0rc1 is cut

2012-09-18 Thread Paul Hobson
On Tue, Sep 18, 2012 at 3:57 PM, Russell E. Owen ro...@uw.edu wrote: In article 50509fb1.7070...@stsci.edu, Michael Droettboom md...@stsci.edu wrote: I have tagged and created a tarball for 1.2.0rc1. The githash is bda6dd9feab8. The tarball is on the github download page here:

Re: [matplotlib-devel] RFC: boxplot_enhanced paired_stats

2012-11-16 Thread Paul Hobson
On Fri, Nov 16, 2012 at 7:58 AM, Skipper Seabold jsseab...@gmail.comwrote: On Fri, Nov 16, 2012 at 10:19 AM, Yaroslav Halchenko s...@onerussian.com wrote: I just found some code (http://www.onerussian.com/tmp/plots.py and pasted below for review/feedback) laying around which I wrote around

Re: [matplotlib-devel] MEP12: Reorganize example gallery and clean up examples

2012-12-10 Thread Paul Hobson
On Mon, Dec 10, 2012 at 2:18 PM, Tony Yu tsy...@gmail.com wrote: Hi all, I'm not sure if non-core-developers are allowed to post MEPs, but I just did ;). MEP 12 outlines the reorganization of the example gallery and subsequent clean up of the examples:

Re: [matplotlib-devel] MEP12: Reorganize example gallery and clean up examples

2012-12-12 Thread Paul Hobson
On Wed, Dec 12, 2012 at 5:59 AM, Michael Droettboom md...@stsci.edu wrote: http://matplotlib.org/examples/api/clippath_demo.html It's perfectly reasonable code, but seems strange that it's clipped off to the corner which I think makes it less useful as an example. If I understand

Re: [matplotlib-devel] matplotlib.org website DOWN (again)

2012-12-23 Thread Paul Hobson
On Sat, Dec 22, 2012 at 3:25 PM, Patrick Marsh patrickmars...@gmail.comwrote: The matplotlib.org website is down right now -- at least for me. Also, over the last 2-3 months or so, I'd guess that about 50% of the time I go to the website it's down. Granted, I don't go daily, so I'm guessing

Re: [matplotlib-devel] How to contribute a new kind of plot

2013-03-15 Thread Paul Hobson
On Thu, Mar 14, 2013 at 1:50 AM, Pierre Barbier de Reuille pie...@barbierdereuille.net wrote: Hello, for my own research, I have implemented a function plotting datasets as violin plots ( http://en.wikipedia.org/wiki/Violin_plot ). I attach an example output that I am using. It is fairly

Re: [matplotlib-devel] MEP14: Improve text handling

2013-05-30 Thread Paul Hobson
On Thu, May 30, 2013 at 5:03 PM, Michael Droettboom md...@stsci.edu wrote: On 05/30/2013 02:27 PM, Chris Barker - NOAA Federal wrote: With a fully-function mathtex, it could be the default (only?) text layout system for MPL, simplifying things quite a bit. I'm not sure that's realistic.

Re: [matplotlib-devel] matplotlib 1.3.0rc4 (was: matplotlib 1.3.0rc3 tomorrow)

2013-07-02 Thread Paul Hobson
On Fri, Jun 21, 2013 at 10:42 AM, Michael Droettboom md...@stsci.eduwrote: I have made a new release candidate (1.3.0rc4) that fixes the following vs. 1.3.0rc3: - It doesn't add a setup.cfg file to the tarball - It doesn't install the KnownFailure nose plugin as a pkg_resources

Re: [matplotlib-devel] I have a Mac!

2013-08-16 Thread Paul Hobson
Mike, That's great news. Is there any chance we can look forward to official instructions for setting up a Mac to develop matplotlib? I gave up a long time ago and started piecing to together my meager PRs in a linux VM. -paul On Fri, Aug 16, 2013 at 6:52 AM, Michael Droettboom md...@stsci.edu

Re: [matplotlib-devel] I have a Mac!

2013-08-16 Thread Paul Hobson
to do that there, too. So stay tuned. Mike On 08/16/2013 10:02 AM, Paul Hobson wrote: Mike, That's great news. Is there any chance we can look forward to official instructions for setting up a Mac to develop matplotlib? I gave up a long time ago and started piecing to together my meager

Re: [matplotlib-devel] I have a Mac!

2013-08-16 Thread Paul Hobson
On Fri, Aug 16, 2013 at 9:08 AM, Chris Barker - NOAA Federal chris.bar...@noaa.gov wrote: On Fri, Aug 16, 2013 at 7:32 AM, Michael Droettboom md...@stsci.edu wrote: We actually discussed this very issue yesterday in our Google hangout about continuous integration. We're probably going to

[matplotlib-devel] Autogenerated docstrings, pyplot, and Windows code completion

2013-09-16 Thread Paul Hobson
Hey folks, While I'm primarily a Vim/Sublime Text kind of guy, my employer provides me with a Windows machine with Visual Studio and whatnot. So I've been giving PTVS a shot (https://pytools.codeplex.com/). Seems perfectly nice so far. But the point is that I just wanted the dev team to know

Re: [matplotlib-devel] Image comparison decorators outside matplotlib

2013-11-06 Thread Paul Hobson
Eduard, Did you make any progress on this? I'm trying to do the same thing and it's skipping my tests entirely. -paul On Thu, Oct 10, 2013 at 5:41 AM, Eduard Bopp eduard.b...@aepsil0n.dewrote: Hello, I am developing a toolkit to parse, analyse and plot some scientific data using

[matplotlib-devel] Strange Error on Travis 2.6 build (can't find cbook)

2013-12-02 Thread Paul Hobson
Hey folks, I've got a branch going to refactor the boxplot function and address several issues that have cropped up lately. Currently, everything on my feature branch is working well except for Travis' Python 2.6 build. Here's a link directly the error on the build:

Re: [matplotlib-devel] Strange Error on Travis 2.6 build (can't find cbook)

2013-12-02 Thread Paul Hobson
in there is non 2.6 compatible, but don't know enough to tell you what. On Mon, Dec 2, 2013 at 1:00 PM, Paul Hobson pmhob...@gmail.com wrote: Hey folks, I've got a branch going to refactor the boxplot function and address several issues that have cropped up lately. Currently, everything

Re: [matplotlib-devel] PDF not readable by Adobe PDF readers

2013-12-03 Thread Paul Hobson
You mentioned in the comments that it only occurs with a lot (~4 GB)of data. Could it be that you're on a 32-bit system and you're generating a file that's too big for your OS to handle? On Tue, Dec 3, 2013 at 1:21 AM, buckeliger buckeli...@gmx.ch wrote: I have described and uploaded a sample

[matplotlib-devel] Axes properties are cleared after offsetting spines

2014-02-04 Thread Paul Hobson
I noticed that when you offset the spines of an Axes object, the labels, ticks, and ticklabels/formatting get mostly cleared. Is this intentional and is there a way to prevent (or undo) it? It's probably easiest to just look at a notebook: http://nbviewer.ipython.org/gist/phobson/8818648 That

Re: [matplotlib-devel] is R wrong? (boxplot)

2014-02-15 Thread Paul Hobson
Hey Yaroslav, As the author of the fix and the recent overhaul to boxplots, I can say with certainty that R is wrong! ;-) More seriously, the main thing that I take away from Tukey's paper about boxplots, is that there are many valid ways to draw them. I personally set up the new boxplot

Re: [matplotlib-devel] is R wrong? (boxplot)

2014-02-15 Thread Paul Hobson
cbook.boxplot_stats' docstring got cutoff. I'll pull together a PR to fix that soon. Feel free to hit me up with any other questions! -paul On Sat, Feb 15, 2014 at 2:20 PM, Yaroslav Halchenko s...@onerussian.comwrote: Hi Paul, On Sat, 15 Feb 2014, Paul Hobson wrote: As the author

Re: [matplotlib-devel] Axes properties are cleared after offsetting spines

2014-03-25 Thread Paul Hobson
Wow. Thanks so much, Stan! This is a huge help and works just as I need it to. Much appreciated! On Mon, Mar 24, 2014 at 11:26 AM, Stan West stan.w...@nrl.navy.mil wrote: On 2014-03-24 14:08, Stan West wrote: May I suggest that you look at the mailing list thread from that time [1], try

Re: [matplotlib-devel] Setting default labelpad

2014-05-30 Thread Paul Hobson
Peter, Can you submit this as a pull request on github? http://matplotlib.org/devel/gitwash/git_development.html On Fri, May 30, 2014 at 12:37 PM, Peter St. John peterc.stj...@gmail.com wrote: Finally made this into a patch to allow the dynamic updating of the axes.labelpad parameter. Hope

Re: [matplotlib-devel] Better defaults all around?

2014-11-23 Thread Paul Hobson
I'd like to propose an update to the default boxplot symbology: all black Q: How much more black could the boxplots be? A: None. None more black. (sorry, ben) On Fri, Nov 21, 2014 at 7:18 PM, Benjamin Root ben.r...@ou.edu wrote: With regards to defaults for 2.0, I am actually all for breaking

Re: [matplotlib-devel] Who runs our twitter account?

2014-12-20 Thread Paul Hobson
For Q and A no. But it's great for announcements, links to example of upcoming or new features, etc.  — Sent from Mailbox On Sat, Dec 20, 2014 at 2:11 PM, Eric Firing efir...@hawaii.edu wrote: On 2014/12/20, 10:45 AM, Thomas Caswell wrote: We have a Twitter account?!? It's news to me, too.

Re: [matplotlib-devel] Capitalization of Matplotlib

2015-02-16 Thread Paul Hobson
Perhaps this is a bit a of tangent, but what is exactly is the distinction between the project and the software? Is it as simple as: software = code and project = code + mailing list + documentation + managing issues on github? On Mon, Feb 16, 2015 at 11:04 AM, Matthew Brett

Re: [matplotlib-devel] release strategy and the color revolution

2015-02-16 Thread Paul Hobson
There are several cycles in seaborn. Is it safe to assume that you mean the 'deep' palette? On Mon, Feb 16, 2015 at 14:40 Eric Firing efir...@hawaii.edu wrote: On 2015/02/16 12:01 PM, Eric Firing wrote: Proposals for the new color cycle for line plots? Here is a proposal: we simply adopt

Re: [matplotlib-devel] ginput in nbagg backend to use in IPython Notebooks

2015-01-27 Thread Paul Hobson
I'm 99% sure you can do this in a GUI window. Does your solution have to be in the notebook? On Tue, Jan 27, 2015 at 12:37 AM, Mark Bakker mark...@gmail.com wrote: Thanks, Tom. I want to use ginput to draw a straight line on a graph. The line is used to select a cross-section of a contour

Re: [matplotlib-devel] Matplotlib style gallery

2015-01-05 Thread Paul Hobson
Tony! This is very cool. Bravo. On Mon, Jan 5, 2015 at 8:42 PM, Tony Yu tsy...@gmail.com wrote: I've been playing around with learning Javascript lately. As part of the process, I created a Flask app to build a gallery for matplotlib style sheets:

Re: [matplotlib-devel] Histogram normalization and overflow bins

2015-03-07 Thread Paul Hobson
IMO, this seems like a bug. I would expect bars to change height with zoom/limit levels.  -p — Sent from Mailbox On Sat, Mar 7, 2015 at 4:20 PM, Tomo Lazovich lazov...@gmail.com wrote: Hello matplotlib developers, I'm not sure if this is the right mailing list for this question, so please

Re: [matplotlib-devel] Histogram normalization and overflow bins

2015-03-10 Thread Paul Hobson
You can comment on specific lines of code in the pull request interface, but that's not what I think you're describing. A better practice, IMO is to raise a DeprecationWarning when the soon-to-be-removed code is executed. Then you can just grep for those and get cracking. -p On Tue, Mar 10, 2015

Re: [matplotlib-devel] Fwd: SciPy 2015 CFP Email 2

2015-03-30 Thread Paul Hobson
Joe, You should introduce yourself as that guy who did that paw detection post that saved that one guy's research.  -P — Sent from Mailbox On Mon, Mar 30, 2015 at 4:52 PM, Thomas Caswell tcasw...@gmail.com wrote: +1 from me. I suspect many people got their start learning mpl from you

Re: [matplotlib-devel] Easy problem working with dev library

2015-05-16 Thread Paul Hobson
After you've setup your development environment with all of the MPL dependencies, navigate to the MPL source directory and install it with: $ python setup.py develop or $ pip install -e . That'll create a link in site-packages (or whatever that directory is) to the source directory. After you

Re: [matplotlib-devel] RFC: candidates for a new default colormap

2015-06-03 Thread Paul Hobson
A brief poll of my office gave 3 A's and a B. One of the A's came from someone who can't remember their distinct flavor of color blindness, but definitely gets tripped up by reds and greens. -p On Wed, Jun 3, 2015 at 1:29 PM, Arnd Baecker arnd.baec...@web.de wrote: In our group I also recieved

Re: [matplotlib-devel] RFC: candidates for a new default colormap

2015-06-03 Thread Paul Hobson
I'm really digging option D too -- it has the bonus of being unambiguously distinct from GNUPlot, On Wed, Jun 3, 2015 at 5:29 PM, Benjamin Root ben.r...@ou.edu wrote: May I suggest an update to the code showing the 3d sRGB colorspace? Can you add a shade=False to it? Currently, in

Re: [matplotlib-devel] RFC: candidates for a new default colormap

2015-06-03 Thread Paul Hobson
Just want to chime in and say that they colorblind versions of the maps are pretty nice too. Can those be made available? It also occurs to me that these are pretty similar to the existing colormap GNUPlot. I don't know if that's good or bad, but something to keep in mind if the desire is for

Re: [matplotlib-devel] RFC: candidates for a new default colormap

2015-06-02 Thread Paul Hobson
Sorry for send you two emails, Nathaniel. I'm going to vote for A with C as a close second. Of the three, B looks the most bandy to me (but not overly so). -p On Tue, Jun 2, 2015 at 6:46 PM, Nathaniel Smith n...@pobox.com wrote: Hi all, As was hinted at in a previous thread, Stéfan van der

Re: [matplotlib-devel] PyQt4 in Matplotlib v2.0.0

2017-02-02 Thread Paul Hobson
It appears that the build of matplotlib in conda-forge does not require pyqt5: https://github.com/conda-forge/matplotlib-feedstock/blob/master/recipe/meta.yaml So in your case, I would do: conda remove pyqt5 matplotlib conda install --channel=conda-forge matplotlib On Thu, Feb 2, 2017 at 8:48

Re: [matplotlib-devel] [Matplotlib-users] License, freetype

2017-02-17 Thread Paul Hobson
Chad, My recollections is that matplotlib doesn't distribute the source code to FreeType, it only uses it as a dependency. As such, MPL is in the clear with its more permissive licensing. -Paul On Fri, Feb 17, 2017 at 12:45 PM, CAB wrote: > Hi, All, > > I just went to

Re: [matplotlib-devel] Heatmap for 7K X 7K matrix

2016-08-26 Thread Paul Hobson
Madhav, Do I understand correctly that you want to generate a 14k x 14k image in matplotlib? Are there computer monitors available that can display such an image in native quality? -p On Thu, Aug 25, 2016 at 11:59 PM, Jens Nielsen wrote: > Hi Madhav > > We have moved