[Matplotlib-users] How to plot heatmap with matplotlib?

2011-09-25 Thread fdu.xia...@gmail.com
Dear all, Heatmap (like those on the page http://www2.warwick.ac.uk/fac/sci/moac/students/peter_cock/r/heatmap/) is a frequently used type of image in microarray data analysis. However, it seems there are no convenient functions in matplotlib to plot heatmap (please correct me if I was wrong

Re: [Matplotlib-users] pylab, twinx, and displayed coordinates

2011-09-25 Thread Andreas Matthias
Benjamin Root wrote: > On Sunday, September 25, 2011, Andreas Matthias > wrote: >> Paul Ivanov wrote: >> >>> On Sat, Sep 24, 2011 at 3:59 AM, Andreas Matthias >>> wrote: Hmm. I do not get a reversed list of axes. This is the output of the example code below: [, > ] [,

Re: [Matplotlib-users] pylab, twinx, and displayed coordinates

2011-09-25 Thread Benjamin Root
On Sunday, September 25, 2011, Andreas Matthias wrote: > Paul Ivanov wrote: > >> On Sat, Sep 24, 2011 at 3:59 AM, Andreas Matthias >> wrote: >>> Hmm. I do not get a reversed list of axes. This is the output of >>> the example code below: >>> >>> [, ] >>> [, ] >> >> This doesn't seem right - for m

Re: [Matplotlib-users] pylab, twinx, and displayed coordinates

2011-09-25 Thread Andreas Matthias
Paul Ivanov wrote: > On Sat, Sep 24, 2011 at 3:59 AM, Andreas Matthias > wrote: >> Hmm. I do not get a reversed list of axes. This is the output of >> the example code below: >> >> [, > object at 0x8f633ec>] >> [, > object at 0x8f633ec>] > > This doesn't seem right - for me that code results in

[Matplotlib-users] How to plot heatmap with matplotlib?

2011-09-25 Thread fdu.xia...@gmail.com
Dear all, Heatmap (like those on the page http://www2.warwick.ac.uk/fac/sci/moac/students/peter_cock/r/heatmap/) is a frequently used type of image in microarray data analysis. However, it seems there are no convenient functions in matplotlib to plot heatmap (please correct me if I was wrong),