Re: [Matplotlib-users] cross hatching in contours?
On Thu, Sep 15, 2011 at 10:33 PM, Jonathan Slavin jsla...@cfa.harvard.edu wrote: I'm wondering if there is some way to do cross hatching as a way to fill contours rather than colors (using contourf). The only references to cross hatching I see in the documentation are for patches type objects. As far as I can tell, contour and contourf return objects of their own type (contour.QuadContourSet) that do not have hatch as an attribute. Yes, it seems that hatching is only supported in patches. You may workaround this by converting contours to multiple patches. See the attachment. If it's not possible currently, how hard would it be to add that capability to contourf? What approach would you recommend? It may not be that difficult, but seems to require an api change (e.g., draw_path_collections). Can you file an issue on our github page? Regards, -JJ Regards, Jon -- Doing More with Less: The Next Generation Virtual Desktop What are the key obstacles that have prevented many mid-market businesses from deploying virtual desktops? How do next-generation virtual desktops provide companies an easier-to-deploy, easier-to-manage and more affordable virtual desktop model.http://www.accelacomm.com/jaw/sfnl/114/51426474/ ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users contour_to_hatched_patches.py Description: Binary data -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] GridSpec has unecpected effect
Thanks for reporting this. I opened a pull request that I believe fixes this problem. https://github.com/matplotlib/matplotlib/pull/472 Please test this if you can. Depending on your need, you may work around this by calling all the set_position method always after all the GridSpec.update call. Regards, -JJ On Sat, Sep 17, 2011 at 1:37 AM, Kurt Mueller kurt.alfred.muel...@gmail.com wrote: Hi, In the following script, it seems to me, that GridSpec does not work as expected. #!/usr/bin/env python # vim: set fileencoding=utf-8 : # adapted from http://matplotlib.sourceforge.net/users/gridspec.html import matplotlib.pyplot as plt from matplotlib.gridspec import GridSpec fig = plt.figure() gs1 = GridSpec(3,3) gs1.update( left=0.10, right=0.45 ) ax1 = fig.add_subplot( gs1[ 0:1, 0:1 ] ) ax1.set_position( [0.1, 0.1, 0.2, 0.8] ) gs2 = GridSpec(3,3) gs2.update( left=0.55, right=0.95 ) ax2 = fig.add_subplot( gs2[ 1:3, 1:3 ] ) ax2.set_position( [0.5, 0.1, 0.2, 0.8] ) plt.show() First I put an Axes ax1 with gs1. For some reason, I want to adjust ax1 with ax1.set_position. (In the real application only fine adjust) If I run the script only to this point it works as expected. Next I put another Axes ax2 with a new GridSpec gs2. With the command gs2.update() the Axes ax1 will be put back to the place where it would be without ax1.set_position(). Is this behavior to be explained? Thanks -- Kurt Mueller -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] bug report and fix for bracket arrow (annotations)
Thanks for reporting this. This is now fixed in the v1.0.x-maint branch and the master branch. Regards, -JJ On Sat, Sep 17, 2011 at 10:33 AM, Daniel Hyams dhy...@gmail.com wrote: In http://matplotlib.sourceforge.net/users/annotations_guide.html , about 1/3 of the way down, there is a little demonstrator for the different arrowstyles -, -, ]-, etc. Looking at the figure closely, there is no difference between the -[ and ]- styles. The fix for this is in patches.py, around line 3276 (matplotlib 1.0.0). Comments in that routine clipped out for brevity. class BracketA(_Bracket): def __init__(self, widthA=1., lengthA=0.2, angleA=None): super(ArrowStyle.BracketA, self).__init__(None,True, widthA=widthA, lengthA=lengthA, angleA=angleA ) If you flip the first two args of the __init__ call, that fixes it: class BracketA(_Bracket): def __init__(self, widthA=1., lengthA=0.2, angleA=None): super(ArrowStyle.BracketA, self).__init__(True,None, ## flip these arguments widthA=widthA, lengthA=lengthA, angleA=angleA ) -- Daniel Hyams dhy...@gmail.com -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Drawing on a figure, not a subplot
On Sat, Sep 17, 2011 at 6:10 AM, John Ladasky john_lada...@sbcglobal.net wrote: But that isn't my goal here. I want to add lines to the FIGURE, outside of any Axes. Does anyone know how to accomplish this? Thanks! Not sure what you mean here. Adding a patch to an axes does not mean it cannot be drawn outside of axes. As far as you set (or unset) proper clip box, artists can be drawn anywhere in the canvas regardless of the axes it belongs to. Here is an example, Regards, -JJ ax = subplot(111) from matplotlib.patches import FancyArrow p = FancyArrow(0.05, 0.5, 0.2, 0.0, width=0.01, length_includes_head=False, head_width=None, head_length=None, shape='full', overhang=0, head_starts_at_zero=False, transform=ax.figure.transFigure, clip_on=False) ax.add_patch(p) -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] GridSpec has unecpected effect
Am 17.09.2011 um 15:38 schrieb Jae-Joon Lee: Thanks for reporting this. I opened a pull request that I believe fixes this problem. https://github.com/matplotlib/matplotlib/pull/472 Thank you very much! Please test this if you can. I hope next week. Depending on your need, you may work around this by calling all the set_position method always after all the GridSpec.update call. Thanks, yes this will work for me. -- kurt.alfred.muel...@gmail.com -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
[Matplotlib-users] [ANN] glumpy 0.2.0
Hi folks, I am pleased to announce a new release of glumpy, a small python library for the (very) fast vizualization of numpy arrays, (mainly two dimensional) that has been designed with efficiency in mind. If you want to draw nice figures for inclusion in a scientific article, you’d better use matplotlib but if you want to have a sense of what’s going on in your simulation while it is running, then maybe glumpy can help you. Download and screenshots at: http://code.google.com/p/glumpy/ Nicolas-- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
[Matplotlib-users] xticks() shifted by 1
Hi,
please consider this snippet:
import matplotlib.pyplot as plt
d={}
for i in range(1,21):
d[i] = i**2
plt.plot(d.values())
plt.xticks(d.keys())
plt.show()
As it can be seen from attached screenshot, xticks values are shifted to
right (by 1).
Seems strange, but perhaps something to do with Python 0-start.
So why plot starts at beginning of x-axis and xticks start shifted by 1?
How does regular matplotlib users handle similar code?
Thanks
attachment: image.png--
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Re: [Matplotlib-users] xticks() shifted by 1
On 09/17/2011 09:57 AM, Klonuo Umom wrote:
Hi,
please consider this snippet:
import matplotlib.pyplot as plt
d={}
for i in range(1,21):
d[i] = i**2
plt.plot(d.values())
This is plotting values against the zero-based index. What you want is
plt.plot(d.keys(), d.values())
plt.xticks(d.keys())
plt.show()
As it can be seen from attached screenshot, xticks values are shifted to
right (by 1).
Seems strange, but perhaps something to do with Python 0-start.
So why plot starts at beginning of x-axis and xticks start shifted by 1?
How does regular matplotlib users handle similar code?
Thanks
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Re: [Matplotlib-users] xticks() shifted by 1
On Saturday, September 17, 2011, Klonuo Umom klo...@gmail.com wrote:
Hi,
please consider this snippet:
import matplotlib.pyplot as plt
d={}
for i in range(1,21):
d[i] = i**2
plt.plot(d.values())
plt.xticks(d.keys())
plt.show()
As it can be seen from attached screenshot, xticks values are shifted to
right (by 1).
Seems strange, but perhaps something to do with Python 0-start.
So why plot starts at beginning of x-axis and xticks start shifted by 1?
How does regular matplotlib users handle similar code?
Thanks
When you called plot() with only the y values, mpl will assume x values as
range(len(y)). Just call plot with both x and y values.
Ben Root
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Re: [Matplotlib-users] xticks() shifted by 1
Thanks for your fast replies. One more thing if possible: How can I tell xticks() to start at 0 (at x-axis start) -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] xticks() shifted by 1
On Sat, Sep 17, 2011 at 3:22 PM, Klonuo Umom klo...@gmail.com wrote: Thanks for your fast replies. One more thing if possible: How can I tell xticks() to start at 0 (at x-axis start) Maybe what you want is xtick_labels()? xticks() merely tells mpl where on the x-axis you want ticks to show up. xtick_labels() will tell mpl what to label each tick (but won't change how many there are and where they are placed). Ben Root -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] xticks() shifted by 1
Hm.. it not within matplotlib.pyplot module... needs more digging OK, thanks On Sat, Sep 17, 2011 at 10:27 PM, Benjamin Root ben.r...@ou.edu wrote: On Sat, Sep 17, 2011 at 3:22 PM, Klonuo Umom klo...@gmail.com wrote: Thanks for your fast replies. One more thing if possible: How can I tell xticks() to start at 0 (at x-axis start) Maybe what you want is xtick_labels()? xticks() merely tells mpl where on the x-axis you want ticks to show up. xtick_labels() will tell mpl what to label each tick (but won't change how many there are and where they are placed). Ben Root -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] xticks() shifted by 1
On Sat, Sep 17, 2011 at 3:09 PM, Eric Firing efir...@hawaii.edu wrote:
On 09/17/2011 09:57 AM, Klonuo Umom wrote:
Hi,
please consider this snippet:
import matplotlib.pyplot as plt
d={}
for i in range(1,21):
d[i] = i**2
plt.plot(d.values())
This is plotting values against the zero-based index. What you want is
plt.plot(d.keys(), d.values())
While this is safe because calls to keys and values will return lists
in congruent order of no intervening dict modifications are made
http://stackoverflow.com/questions/835092/python-dictionary-are-keys-and-values-always-the-same-order
it is a bit fragile because there is no guarantee the dict keys will
be ordered, right, which is probably not what the OP wants. Maybe
x = sorted(d.keys())
y = [d[k] for k in x]
plot(x, y)
JDH
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Re: [Matplotlib-users] xticks() shifted by 1
Yes, I noticed the same and indeed I used sorted values in original problem I forgot to add it in my simplified snippet On Sat, Sep 17, 2011 at 10:34 PM, John Hunter jdh2...@gmail.com wrote: While this is safe because calls to keys and values will return lists in congruent order of no intervening dict modifications are made http://stackoverflow.com/questions/835092/python-dictionary-are-keys-and-values-always-the-same-order it is a bit fragile because there is no guarantee the dict keys will be ordered, right, which is probably not what the OP wants. Maybe x = sorted(d.keys()) y = [d[k] for k in x] plot(x, y) -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] xticks() shifted by 1
On Sat, Sep 17, 2011 at 3:33 PM, Klonuo Umom klo...@gmail.com wrote: Hm.. it not within matplotlib.pyplot module... needs more digging OK, thanks On Sat, Sep 17, 2011 at 10:27 PM, Benjamin Root ben.r...@ou.edu wrote: On Sat, Sep 17, 2011 at 3:22 PM, Klonuo Umom klo...@gmail.com wrote: Thanks for your fast replies. One more thing if possible: How can I tell xticks() to start at 0 (at x-axis start) Maybe what you want is xtick_labels()? xticks() merely tells mpl where on the x-axis you want ticks to show up. xtick_labels() will tell mpl what to label each tick (but won't change how many there are and where they are placed). Ben Root Sorry, I am used to working from the axes objects, not from the pyplot interface. Most of the axes methods are available to pyplot, but it looks like Axes.set_xticklabels() is not available to pyplot. But honestly, I think you are making this harder than it is. The line being drawn starts at (0, 0) coordinates. The plot is correct, and I am not sure what you are trying to acheive. Ben Root -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] xticks() shifted by 1
I want to plot multiple plot lines, and would prefer lines to start at x-axis beginning (so they source vertically from y-axis) If I use suggested method from current replies lines would not start from x-axis beginning, but I guess I'll need to look in Axes module and make my preferences. Thanks On Sat, Sep 17, 2011 at 10:42 PM, Benjamin Root ben.r...@ou.edu wrote: Sorry, I am used to working from the axes objects, not from the pyplot interface. Most of the axes methods are available to pyplot, but it looks like Axes.set_xticklabels() is not available to pyplot. But honestly, I think you are making this harder than it is. The line being drawn starts at (0, 0) coordinates. The plot is correct, and I am not sure what you are trying to acheive. Ben Root -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] xticks() shifted by 1
On Sat, Sep 17, 2011 at 3:51 PM, Klonuo Umom klo...@gmail.com wrote: I want to plot multiple plot lines, and would prefer lines to start at x-axis beginning (so they source vertically from y-axis) If I use suggested method from current replies lines would not start from x-axis beginning, but I guess I'll need to look in Axes module and make my preferences. Thanks Or you could set the x-axis limits... Ben Root -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] xticks() shifted by 1
Yes, that seems the right way I used it before but forgot it in the mean time On Sat, Sep 17, 2011 at 10:56 PM, Benjamin Root ben.r...@ou.edu wrote: On Sat, Sep 17, 2011 at 3:51 PM, Klonuo Umom klo...@gmail.com wrote: I want to plot multiple plot lines, and would prefer lines to start at x-axis beginning (so they source vertically from y-axis) If I use suggested method from current replies lines would not start from x-axis beginning, but I guess I'll need to look in Axes module and make my preferences. Thanks Or you could set the x-axis limits... Ben Root -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
[Matplotlib-users] [ANN] glumpy 0.2.0
Hi folks, I am pleased to announce a new release of glumpy, a small python library for the (very) fast vizualization of numpy arrays, (mainly two dimensional) that has been designed with efficiency in mind. If you want to draw nice figures for inclusion in a scientific article, you’d better use matplotlib but if you want to have a sense of what’s going on in your simulation while it is running, then maybe glumpy can help you. Download and screenshots at: http://code.google.com/p/glumpy/ Nicolas-- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Drawing on a figure, not a subplot
Hi, JJ, Thanks for the reply. On Sat, 2011-09-17 at 23:04 +0900, Jae-Joon Lee wrote: Adding a patch to an axes does not mean it cannot be drawn outside of axes. As far as you set (or unset) proper clip box, artists can be drawn anywhere in the canvas regardless of the axes it belongs to. Here is an example, ax = subplot(111) from matplotlib.patches import FancyArrow p = FancyArrow(0.05, 0.5, 0.2, 0.0, width=0.01, length_includes_head=False, head_width=None, head_length=None, shape='full', overhang=0, head_starts_at_zero=False, transform=ax.figure.transFigure, clip_on=False) ax.add_patch(p) OK, clip boxes are new to me, I will read more. Your suggestion seems a bit kludgy for a multi-panel plot like mine, but it looks like it might get the job done. On Sat, Sep 17, 2011 at 6:10 AM, John Ladasky john_lada...@sbcglobal.net wrote: But that isn't my goal here. I want to add lines to the FIGURE, outside of any Axes. Does anyone know how to accomplish this? Thanks! Not sure what you mean here. I'm still fairly new to the Matplotlib code, but I have some experience with wxPython and its sizers. Making objects work correctly when they are resized often depends on choosing the right coordinate system for scaling. In matplotlib, each Artist has its own coordinate space. It seemed most logical that, for an object that is connected to the whole figure rather than just one of its subplots, it should use the figure's coordinate space. It appears that the transform keyword in your sample code accomplishes that, though in a roundabout way. Also, if I understand the structure of a Matplotlib.Artist object correctly, each has a list of Artist children which gets called recursively when one issues a draw command for the parent. Suppose that, after defining my plot, I should delete the one subplot that contains my FancyArrows, which happened to be drawn outside of that subplot's normal clip box? The FancyArrows would be deleted along with the subplot. If defining the object hierarchy correctly is a sample matter of adding an Artist object of the desired type into the object's list of children, I would try this. Given that there are very specific methods like Figure.text(), Figure.add_subplot(), etc., I suspected that it might be more involved than that. These might just be convenience methods. -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Drawing on a figure, not a subplot
On Fri, Sep 16, 2011 at 4:10 PM, John Ladasky john_lada...@sbcglobal.net wrote: Now I would like to add the axis lines and arrows. In fact, I would prefer a FancyArrow object. I can see how to add non-text objects to an Axes, e.g.: ax = fig.add_subplot(111) ax.add_patch(my_arrow) But that isn't my goal here. I want to add lines to the FIGURE, outside of any Axes. Does anyone know how to accomplish this? Thanks! The artist tutorial covers drawing directly to a figure http://matplotlib.sourceforge.net/users/artists.html#figure-container I believe you could adapt the patches.FancyArrow to the same approach. JDH -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Drawing on a figure, not a subplot
On Sat, 2011-09-17 at 19:19 -0500, John Hunter wrote: The artist tutorial covers drawing directly to a figure http://matplotlib.sourceforge.net/users/artists.html#figure-container I believe you could adapt the patches.FancyArrow to the same approach. Thanks, John! I got JJ's approach to work, but I also tried it your way and it seems to me to generate tidier code. You don't have to deal with clip boxes either. Example: [code] aspect = 23.0 / 8.0 # (These are my figure dimensions, X / Y) tr = fig.transFigure w, h = 0.008, 0.02 ha = FancyArrow(0.0175, 0.03, 0.645, 0.0, width=w, head_length=h, \ transform=tr) va = FancyArrow(0.0125, 0.045, 0.0, 0.845, width=w/aspect, \ head_length=h*aspect, transform=tr) fig.patches.extend([ha, va]) [/code] So it would appear that the special methods add_axes and add_subplot exist only so that the stateful Matlab-like interface can be informed as to which Axes object is current. For any other object type, you just add it to the list of the appropriate type in the Figure object. -- BlackBerryreg; DevCon Americas, Oct. 18-20, San Francisco, CA http://p.sf.net/sfu/rim-devcon-copy2 ___ Matplotlib-users mailing list Matplotlib-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/matplotlib-users
