Re: [Matplotlib-users] axes_grid1 and colorbar ticks

2011-11-16 Thread Yoshi Rokuko
+--- Jae-Joon Lee ---+
> This seems to be a bug that need to be fixed.
> Meanwhile, use "locator" parameter as below.
> 
> cbar = grid.cbar_axes[0].colorbar(im, locator=ticks)

that works, thank you!

best regards, yoshi

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Re: [Matplotlib-users] Meridians not show using Mercator projection

2011-11-16 Thread Jeff Whitaker
On 11/16/11 6:16 PM, Gökhan Sever wrote:
> from mpl_toolkits.basemap import Basemap
> import matplotlib.pyplot as plt
> import numpy as np
>
> m = Basemap(projection='merc',lon_0=-79, lat_0=25.5,
> llcrnrlon=-93, urcrnrlon=-63, llcrnrlat=14, urcrnrlat=36.2)
>
> m.drawcoastlines(linewidth=0.3)
> parallels = np.arange(0.,90,2.)
> m.drawparallels(parallels, labels=[1,0,0,0])
> meridians = np.arange(180.,360.,5.)
> m.drawmeridians(meridians, labels=[0,0,0,1])
>
> plt.show()
>
> Two other projections "laea" and "tmerc" work fine for this case.
>
> Any ideas?
>
> Thanks.
>
>
> -- 
> Gökhan
>

Gökhan:  The longitudes in your projection definition are negative (-93 
to -63), so you  need to change

meridians = np.arange(180.,360.,5.)

to

meridians = np.arange(-180.,0.,5.)

It works for the other projections, since the values get transformed to 
projection coordinates anyway.  With merc and cyl, there is no 
transformation for longitudes.

-Jeff


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Re: [Matplotlib-users] Matplotlib colors

2011-11-16 Thread Tony Yu
On Wed, Nov 16, 2011 at 5:35 PM, Jonno  wrote:

> I want to:
> 1. Have matplotlib assign the linecolor for a plot
> 2. Read the linecolor with .get_color()
> 3. Create another plot with the linecolor set to a lighter version of
> the previous linecolor.
>
> Ie:
>
> a, = plot(x,y)
> a.get_color() = 'b'
> b, = plot(x,y, color = "#xx")
>
> Since I'm only using the standard matplotlib assigned colors which
> cycle through b,g,r,c,m,y,k I thought I would just create a mapping
> between each color and a lighter version.
>
> How do I get the hex or RGB string for the base matplotlib colors?
>

There may be an easier way, but in the past I've used a color converter
object
(which seems unnecessarily verbose):

>>> import matplotlib.colors as mcolors
>>> cc = mcolors.ColorConverter()
>>> cc.to_rgb('b')
(0, 0, 1)



>
> Also, if there's a different property I can use to lighten the line
> color without changing the color that would be cool too.
>

If you have a white background (and no overlapping markers/lines), you
could just set the "alpha" argument in the plot command.

Best,
-Tony
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Re: [Matplotlib-users] axes_grid1 and colorbar ticks

2011-11-16 Thread Jae-Joon Lee
This seems to be a bug that need to be fixed.
Meanwhile, use "locator" parameter as below.

cbar = grid.cbar_axes[0].colorbar(im, locator=ticks)
Regards,

-JJ



On Thu, Nov 17, 2011 at 5:35 AM, Yoshi Rokuko  wrote:
> does someone knows how to specify ticks for a colorbar
> inside axesgrid? the following does not work as expected:
>
> from mpl_toolkits.axes_grid1 import AxesGrid
> ticks = [.01, .25, .5, .75, .99]
> grid = AxesGrid()
> [...]
> grid.cbar_axes[i].colorbar(im, ticks=ticks)
>
> i'm thankfull for any pointers,
> yoshi
>
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> contains a definitive record of customers, application performance,
> security threats, fraudulent activity, and more. Splunk takes this
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Re: [Matplotlib-users] Meridians not show using Mercator projection

2011-11-16 Thread Eric Firing
On 11/16/2011 03:16 PM, Gökhan Sever wrote:
> Hi,
>
> Using the example code shown below I can't get meridians plotted on the
> screen:
>
> from mpl_toolkits.basemap import Basemap
> import matplotlib.pyplot as plt
> import numpy as np
>
> m = Basemap(projection='merc',lon_0=-79, lat_0=25.5,
>  llcrnrlon=-93, urcrnrlon=-63, llcrnrlat=14, urcrnrlat=36.2)
>
> m.drawcoastlines(linewidth=0.3)
> parallels = np.arange(0.,90,2.)
> m.drawparallels(parallels, labels=[1,0,0,0])
> meridians = np.arange(180.,360.,5.)

It can't handle the wrap; subtract 360 from your meridians, and they 
will show up.

Eric

> m.drawmeridians(meridians, labels=[0,0,0,1])
>
> plt.show()
>
> Two other projections "laea" and "tmerc" work fine for this case.
>
> Any ideas?
>
> Thanks.
>
>
> --
> Gökhan
>
>
>
> --
> All the data continuously generated in your IT infrastructure
> contains a definitive record of customers, application performance,
> security threats, fraudulent activity, and more. Splunk takes this
> data and makes sense of it. IT sense. And common sense.
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>
>
>
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Re: [Matplotlib-users] newline characters in tick labels

2011-11-16 Thread magurling


Benjamin Root-2 wrote:
> 
> Seems to work fine for me using GTKAgg.
> 
I added these lines:

import matplotlib
matplotlib.use('GTKAgg')

I still get the "\n" printed literally in the label (an actual carriage
return shows up as an empty rectangle).
-- 
View this message in context: 
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Sent from the matplotlib - users mailing list archive at Nabble.com.


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[Matplotlib-users] Matplotlib colors

2011-11-16 Thread Jonno
I want to:
1. Have matplotlib assign the linecolor for a plot
2. Read the linecolor with .get_color()
3. Create another plot with the linecolor set to a lighter version of
the previous linecolor.

Ie:

a, = plot(x,y)
a.get_color() = 'b'
b, = plot(x,y, color = "#xx")

Since I'm only using the standard matplotlib assigned colors which
cycle through b,g,r,c,m,y,k I thought I would just create a mapping
between each color and a lighter version.

How do I get the hex or RGB string for the base matplotlib colors?

Also, if there's a different property I can use to lighten the line
color without changing the color that would be cool too.

Cheers,

Jonno.

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Re: [Matplotlib-users] Separate formatting for tick labels

2011-11-16 Thread Jae-Joon Lee
Try something like this.

ax = subplot(111)
LabelsList = ['Prospero', 'Miranda', 'Caliban', 'Ariel']
ax.set_xticks(range(len(LabelsList)))xlabels = ax.set_xticklabels(
LabelsList, rotation=35,
horizontalalignment='right',
fontstyle='italic', fontsize='10')
ticklabels = ax.get_xticklabels()ticklabels[0].set_fontstyle("normal")

Regards,

-JJ


On Wed, Nov 16, 2011 at 11:25 AM, magurling  wrote:
> LabelsList = ['Prospero', 'Miranda', 'Caliban', 'Ariel']
>
> xlabels = ax.set_xticklabels( LabelsList, rotation=35,
> horizontalalignment='right', fontstyle='italic', fontsize='10')
>

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Re: [Matplotlib-users] Build on VS2008 - warnings

2011-11-16 Thread Mads Ipsen

On 15/11/2011 14:45, Michael Droettboom wrote:
I'd love to see the compiler logs and try to fix what I can.  I don't 
have a Windows install to test, but maybe I can resolve the more 
obvious ones.


Mike

On 11/08/2011 05:49 AM, Mads Ipsen wrote:

Hi,

Thanks to the help from Christoph, I have been able to build 
matplotlib-1.1.0 on both Win XP-32 and 64.


I have noticed though, that quite a few warnings are produced when 
the source is compiled. Is this something that the core developers 
would like to fix, or is it a 'don't care' thing? If the info is 
useful, I'd be happy to post it somewhere.


Best regards,

Mads

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Attached, you'll find the build log from a gcc based build on Ubuntu 
11.04 (64):


Using built-in specs.
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 
4.4.5-15ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-4.4/README.Bugs 
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr 
--program-suffix=-4.4 --enable-shared --enable-multiarch 
--with-multiarch-defaults=x86_64-linux-gnu --enable-linker-build-id 
--with-system-zlib --libexecdir=/usr/lib/x86_64-linux-gnu 
--without-included-gettext --enable-threads=posix 
--with-gxx-include-dir=/usr/include/c++/4.4 
--libdir=/usr/lib/x86_64-linux-gnu --enable-nls --with-sysroot=/ 
--enable-clocale=gnu --enable-libstdcxx-debug --enable-objc-gc 
--disable-werror --with-arch-32=i686 --with-tune=generic 
--enable-checking=release --build=x86_64-linux-gnu 
--host=x86_64-linux-gnu --target=x86_64-linux-gnu

Thread model: posix
gcc version 4.4.5 (Ubuntu/Linaro 4.4.5-15ubuntu1)

Best regards,

Mads

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| Mads Ipsen  |
+--+--+
| Gåsebæksvej 7, 4. tv |  |
| DK-2500 Valby| phone:  +45-29716388 |
| Denmark  | email:  mads.ip...@gmail.com |
+--+--+


running build_ext
building 'matplotlib.ft2font' extension
creating build/temp.linux-x86_64-2.7
creating build/temp.linux-x86_64-2.7/src
creating build/temp.linux-x86_64-2.7/CXX
gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC 
-DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 
-I/home/mpi/git/quantumsource/external-libs/build/lib/python2.7/site-packages/numpy/core/include
 -I/usr/include/freetype2 -I/usr/local/include -I/usr/include -I. 
-I/home/mpi/git/quantumsource/external-libs/build/include/python2.7 -c 
src/ft2font.cpp -o build/temp.linux-x86_64-2.7/src/ft2font.o
gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC 
-DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 
-I/home/mpi/git/quantumsource/external-libs/build/lib/python2.7/site-packages/numpy/core/include
 -I/usr/include/freetype2 -I/usr/local/include -I/usr/include -I. 
-I/home/mpi/git/quantumsource/external-libs/build/include/python2.7 -c 
src/mplutils.cpp -o build/temp.linux-x86_64-2.7/src/mplutils.o
gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC 
-DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 
-I/home/mpi/git/quantumsource/external-libs/build/lib/python2.7/site-packages/numpy/core/include
 -I/usr/include/freetype2 -I/usr/local/include -I/usr/include -I. 
-I/home/mpi/git/quantumsource/external-libs/build/include/python2.7 -c 
CXX/IndirectPythonInterface.cxx -o 
build/temp.linux-x86_64-2.7/CXX/IndirectPythonInterface.o
gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC 
-DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 
-I/home/mpi/git/quantumsource/external-libs/build/lib/python2.7/site-packages/numpy/core/include
 -I/usr/include/freetype2 -I/usr/lo

[Matplotlib-users] Meridians not show using Mercator projection

2011-11-16 Thread Gökhan Sever
Hi,

Using the example code shown below I can't get meridians plotted on the
screen:

from mpl_toolkits.basemap import Basemap
import matplotlib.pyplot as plt
import numpy as np

m = Basemap(projection='merc',lon_0=-79, lat_0=25.5,
llcrnrlon=-93, urcrnrlon=-63, llcrnrlat=14, urcrnrlat=36.2)

m.drawcoastlines(linewidth=0.3)
parallels = np.arange(0.,90,2.)
m.drawparallels(parallels, labels=[1,0,0,0])
meridians = np.arange(180.,360.,5.)
m.drawmeridians(meridians, labels=[0,0,0,1])

plt.show()

Two other projections "laea" and "tmerc" work fine for this case.

Any ideas?

Thanks.


-- 
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Re: [Matplotlib-users] MODIS data and true-color plotting

2011-11-16 Thread Gökhan Sever
On Sun, Nov 13, 2011 at 12:40 PM, Gökhan Sever wrote:

> Hello groups,
>
> I have two questions about working with MODIS data.
>
> 1-) Is there any light Pythonic HDF-EOS wrapper to handle HDF-EOS data
> other than PyNIO [http://www.pyngl.ucar.edu/Nio.shtml] Although, I have
> managed to install that package from its source, it took me many hours to
> figure out all the installation quirks. Something simpler to build and
> mainly for HDFEOS data??
>
> 2-) Another similar question: Has anybody attempted to create true-color
> MODIS images (like the ones shown at [
> http://rapidfire.sci.gsfc.nasa.gov/realtime/]) in Python? So far, I have
> seen one clear tutorial [
> ftp://ftp.ssec.wisc.edu/pub/IMAPP/MODIS/TrueColor/] to create natural
> color images, but uses ms2gt [http://nsidc.org/data/modis/ms2gt/], NDVI
> and IDL. Except the reflectance correction via NDVI, ms2gt and IDL parts
> seem to be implemented in Python.
>
> Till now, I have some progress combining GOES imagery with aircraft data.
> My next task is to combine MODIS data with aircraft and radar data. I would
> be happy to get some guidance and code support if there is any previous
> work been done using Python.
>
> Thanks.
>

Hello all,

Here is my answer to my 2nd question:

http://imageshack.us/photo/my-images/713/modistrue1km.png/

Python script is at
http://code.google.com/p/ccnworks/source/browse/trunk/modis/true.py

This code is based on TrueColor tutorial of Liam Gumley [
ftp://ftp.ssec.wisc.edu/pub/IMAPP/MODIS/TrueColor/] and Peter Kuma's ccplot
tool [http://ccplot.org/]

Currently it only plots true color images from Aqua or Terra using Level 1B
data. For the example image I use the data provided via TrueColor link.

Notes:

1-) Using PyNIO to open hdf-eos files, from ccplot using cctk for 2D data
interpolation, basemap for map plotting and numpy/scipy for other
essentials.

2-) crefl.1km.hdf is reflectance corrected data using NVDI's crefl program.
Set-up TrueColor tutorial and you should be able to get these correction
applied data by calling its main script or set-up another.

3-) MOD03.hdf is the geolocation data.

4-) No need to run ms2gt or any other swath to grid conversion tools, since
the interpolation routine handles this step.

5-) Code is in 100 lines. Unlike TrueColor tutorial it only works for 1KM
resolution. HKM and QKM resolution plotting requires additional steps.

It takes about 2.5 seconds to get the plot on my screen.

Let me know if you have any comments or other suggestions.

Thanks.


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[Matplotlib-users] axes_grid1 and colorbar ticks

2011-11-16 Thread Yoshi Rokuko
does someone knows how to specify ticks for a colorbar
inside axesgrid? the following does not work as expected:

from mpl_toolkits.axes_grid1 import AxesGrid
ticks = [.01, .25, .5, .75, .99]
grid = AxesGrid()
[...]
grid.cbar_axes[i].colorbar(im, ticks=ticks)

i'm thankfull for any pointers,
yoshi

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Re: [Matplotlib-users] Web & matplotlib

2011-11-16 Thread Daryl Herzmann
Hello,

For what it is worth, I do the folllowing on my matplotlib scripts run
from apache on RHEL6.

import os
os.environ[ 'HOME' ] = '/tmp/'
os.environ[ 'USER' ] = 'nobody'

import matplotlib
matplotlib.use( 'Agg' )

This seems to keep matplotlib from bombing out when it attempts to
read dot files, etc.

daryl

On Mon, Nov 14, 2011 at 4:13 AM, Paul de Beurs  wrote:
> Hey,
>
> I work with Mac OSX 10.7.2
> I have a probleem. From the IDLE this little program works fine:
> #!/usr/bin/python
> import numpy
> import matplotlib
> print "Content-Type: text/plain\n"
> print matplotlib.__version__
>
> The output is:
> Content-Type: text/plain
>
> 1.1.0
>
> Starting this program from MAMP gives me:  Internal Server Error
>
> First I change the program into:
> #!/usr/bin/python
> import numpy
> import matplotlib
> print "Content-Type: text/plain\n"
> print 'No error'
>
> But starting this program from MAMP also gives me:  Internal Server Error
>
> Now I change my program into:
> #!/usr/bin/python
> import numpy
> ##import matplotlib
> print "Content-Type: text/plain\n"
> print 'No error'
>
> Now starting this program from MAMP gives me:  No error
>
> So the import of mapplotlib causes this troubles. I don't have these
> problems with the import of numpy.
>
> Can someone help me with this problem?
>
>
>
>
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Re: [Matplotlib-users] newline characters in tick labels

2011-11-16 Thread Benjamin Root
On Tue, Nov 15, 2011 at 11:55 PM, magurling  wrote:

>
>
> Benjamin Root-2 wrote:
> >
> > Actually, that's how I do it, if I remember correctly. What is your
> > platform and mpl version?
> >
>
> I have Ubuntu 11.04, Python 2.7.1+, mpl 1.1.0. I've seen examples in the
> mpl
> gallery of two-liner labels, but none that are rotated. Perhaps I didn't
> look closely enough.
>

Seems to work fine for me using GTKAgg.  Which backend are you using?

Ben Root
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