[Matplotlib-users] (no subject)

2012-07-01 Thread Arek Kedzior
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[Matplotlib-users] IndexError: index out of bounds

2012-07-01 Thread surfcast23

Hi,
  I am translating a Matlab code to python and get the following error when
the codes reaches the plotting section 

Warning (from warnings module):
  File C:\Documents and Settings\My Documents\PHYSICS\Wave-eqn.py, line 40
w = (D*v)
RuntimeWarning: overflow encountered in multiply
Traceback (most recent call last):
  File C:\Documents and Settings\My Documents\PHYSICS\Wave-eqn\.py, line
50, in module
ax.plot_wireframe(x,tdata,data, rstride=10, cstride=10)
  File C:\Python32\lib\site-packages\mpl_toolkits\mplot3d\axes3d.py, line
906, in plot_wireframe
tylines = [tY[i] for i in cii]
  File C:\Python32\lib\site-packages\mpl_toolkits\mplot3d\axes3d.py, line
906, in listcomp
tylines = [tY[i] for i in cii]
IndexError: index out of bounds

My code 

import numpy as np
from numpy import *
from math import  pi
from scipy.linalg import toeplitz
from scipy.special import cotdg
from mpl_toolkits.mplot3d import axes3d
import matplotlib.pyplot as plt



N = 512
h = 2*np.pi/N
x = h*(np.arange(N) + 1)
t = 0
dt = h / 4
a = .1
tmax = 15;   
tplot = .15;
nplots = int(round((tmax/tplot)));
plotgap = int(around(tplot/dt));
c = a + np.sin(x - 1)**2
v = np.exp(-100 * (x - 1)**2)
vold = np.exp(-100 * (x - a*dt - 1)**2)

#i = np.arange(1, N)
#column = np.hstack([0, .5 * (-1**i) * cotdg(i * h/2)])
#D = toeplitz(column, -column) 

column = ((0.5*(-1)**arange(1,N+1))*cotdg(arange(1,N+1))*(h/2));
D = toeplitz(column,-column);print(D.shape);
 
k = np.zeros(((nplots,N))); print(v.shape);print(k.shape);
data = np.concatenate((v.reshape((512,1)).transpose(), k))#data =
np.concatenate((v, k),axis = 1);
#data = np.vstack([v,k]);
tdata = t;

for i in range(1,nplots+1):
for n in range(1,plotgap+1):
t = t+dt
w = (D*v)
vnew = vold-2*dt*c*w
vold = v
v = vnew
data[i,:] = v[0,:]
tdata = vstack([tdata, t])
 
fig = plt.figure()
ax = fig.add_subplot(111, projection='3d')
#X, Y, Z = axes3d.get_test_data(0.05)
ax.plot_wireframe(x,tdata,data, rstride=10, cstride=10)

plt.show()

I looked at the error line and it seems as if the y axes is where the
problem is, but I am not seeing why and would appreciate any help. Thank
you!
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