Re: [Mauiusers] Output and error files are missing

2007-10-30 Thread Preethi Chockalingam 
Hi,

I have fixed the prob.. The prob was with ssh. I included the IP and the public 
rsa key in known_host file. I dint specify the hostname and public rsa key. 
Host name verification was the prob.. 

I thank all who helped me on this..Thanks a lot!

Thanks,
-Preethi


- Original Message 
From: James A. Peltier <[EMAIL PROTECTED]>
To: Preethi Chockalingam <[EMAIL PROTECTED]>
Cc: Alexander Piavka <[EMAIL PROTECTED]>; mauiusers@supercluster.org
Sent: Tuesday, 30 October, 2007 9:06:01 PM
Subject: Re: [Mauiusers] Output and error files are missing

Preethi Chockalingam wrote:
> This is the output of /var/log/messages file..
> 
>  
> 
> Oct 30 09:00:07 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp 
> -rpB /var/spool/torque/spool/85.academyl.ER 
> [EMAIL PROTECTED]:/home/jaya/torque-2.1.6/trial.e85' 
> <mailto:[EMAIL PROTECTED]:/home/jaya/torque-2.1.6/trial.e85'> 
> failed with status=1, giving up after 4 attempts

Are you using NFS/NIS or some similar setup?  If so try adding the 
following to your PBS MOM config file

$usecp *:/ /

-- 
James A. Peltier
Technical Director, RHCE
SCIRF | GrUVi @ Simon Fraser University - Burnaby Campus
Phone  : 778-782-3610
Fax: 778-782-3045
Mobile  : 778-840-6434
E-Mail  : [EMAIL PROTECTED]
Website : http://gruvi.cs.sfu.ca | http://scirf.cs.sfu.ca
MSN: [EMAIL PROTECTED]


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Re: [Mauiusers] Output and error files are missing

2007-10-30 Thread James A. Peltier 

Preethi Chockalingam wrote:

This is the output of /var/log/messages file..

 

Oct 30 09:00:07 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp 
-rpB /var/spool/torque/spool/85.academyl.ER 
[EMAIL PROTECTED]:/home/jaya/torque-2.1.6/trial.e85' 
 
failed with status=1, giving up after 4 attempts


Are you using NFS/NIS or some similar setup?  If so try adding the 
following to your PBS MOM config file


$usecp *:/ /

--
James A. Peltier
Technical Director, RHCE
SCIRF | GrUVi @ Simon Fraser University - Burnaby Campus
Phone   : 778-782-3610
Fax : 778-782-3045
Mobile  : 778-840-6434
E-Mail  : [EMAIL PROTECTED]
Website : http://gruvi.cs.sfu.ca | http://scirf.cs.sfu.ca
MSN : [EMAIL PROTECTED]
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Re: [Mauiusers] Output and error files are missing

2007-10-30 Thread Preethi Chockalingam 
27; failed with status=1, giving up 
after 4 attempts
Oct 30 09:30:21 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/90.academyl.ER to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/trial.e90
Oct 30 09:37:02 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/91.academyl.OU [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/trial.o91' failed with status=1, giving up 
after 4 attempts
Oct 30 09:37:02 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/91.academyl.OU to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/trial.o91
Oct 30 09:37:06 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/91.academyl.ER [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/trial.e91' failed with status=1, giving up 
after 4 attempts
Oct 30 09:37:06 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/91.academyl.ER to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/trial.e91
Oct 30 09:49:39 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/92.academyl.OU [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/trial.o92' failed with status=1, giving up 
after 4 attempts
Oct 30 09:49:39 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/92.academyl.OU to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/trial.o92
Oct 30 09:49:44 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/92.academyl.ER [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/trial.e92' failed with status=1, giving up 
after 4 attempts
Oct 30 09:49:44 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/92.academyl.ER to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/trial.e92
Oct 30 10:08:14 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/93.academyl.OU [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/loop.out' failed with status=1, giving up 
after 4 attempts
Oct 30 10:08:14 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/93.academyl.OU to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/loop.out
Oct 30 10:08:18 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/93.academyl.ER [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/loop.error' failed with status=1, giving up 
after 4 attempts
Oct 30 10:08:18 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/93.academyl.ER to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/loop.error
Oct 30 10:08:49 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/94.academyl.OU [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/loop.out' failed with status=1, giving up 
after 4 attempts
Oct 30 10:08:49 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/94.academyl.OU to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/loop.out
Oct 30 10:08:53 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/94.academyl.ER [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/loop.error' failed with status=1, giving up 
after 4 attempts
Oct 30 10:08:53 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/94.academyl.ER to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/loop.error
Oct 30 10:11:27 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/95.academyl.OU [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/try.o95' failed with status=1, giving up 
after 4 attempts
Oct 30 10:11:27 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/95.academyl.OU to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/try.o95
Oct 30 10:11:31 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/95.academyl.ER [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/try.e95' failed with status=1, giving up 
after 4 attempts
Oct 30 10:11:31 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/95.academyl.ER to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/try.e95
Oct 30 10:22:36 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/96.academyl.OU [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/try.o96' failed with status=1, giving up 
after 4 attempts
Oct 30 10:22:36 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/96.academyl.OU to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/try.o96
Oct 30 10:22:40 academylab3 pbs_mom: sys_copy, command '/usr/bin/scp -rpB 
/var/spool/torque/spool/96.academyl.ER [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/try.e96' failed with status=1, giving up 
after 4 attempts
Oct 30 10:22:40 academylab3 pbs_mom: req_cpyfile, Unable to copy file 
/var/spool/torque/spool/96.academyl.ER to [EMAIL 
PROTECTED]:/home/jaya/torque-2.1.6/try.e96




----- Original Message ----
From: Alexander Piavka <[EMAIL

Re: [Mauiusers] Output and error files are missing

2007-10-30 Thread Preethi Chockalingam 
Hi,

Yup I find the files in /var/spool/torque/undelivered.. But they are with a 
different extension... (.ER and .OU) Why is this happenin??? 

Reg messages files I am not able to make out as which is wrong.. I do find 
jeywords like sshd.. Should I look for some specific message??

Thanks,
-Preethi.C


- Original Message 
From: Alexander Piavka <[EMAIL PROTECTED]>
To: Preethi Chockalingam <[EMAIL PROTECTED]>
Cc: rishi pathak <[EMAIL PROTECTED]>; mauiusers@supercluster.org
Sent: Tuesday, 30 October, 2007 4:16:56 PM
Subject: Re: [Mauiusers] Output and error files are missing

On Tue, 30 Oct 2007, Preethi Chockalingam wrote:

> Hi,
>
> There are no error messages reg scp and ssh.. on pbs_mom node.

  so you don't jave any errors in /var/log/messages on pbs_mom regarding scp/ssh

  on pbs mom do you have the output and error files of your job in 
/var/spool/pbs/undelivered
or /var/spool/pbs/spool while the job is in E state and after it exits the
queue?


> Job status displays the name of the error and output path, but I dont find 
> the files in the specified path.

You can add:
qmgr  -c "set queue NAME keep_completed = 600"
so that then job completes it is still keeped track of for 10 minutes

and after the job completes run 'qstat -f jid'


>
> Thanks
> -Preethi
>
>
> - Original Message 
> From: Alexander Piavka <[EMAIL PROTECTED]>
> To: Preethi Chockalingam <[EMAIL PROTECTED]>
> Cc: rishi pathak <[EMAIL PROTECTED]>; mauiusers@supercluster.org
> Sent: Tuesday, 30 October, 2007 1:43:07 PM
> Subject: Re: [Mauiusers] Output and error files are missing
>
>
>  Look for scp/ssh errors in syslog messages on pbs_mom node
> what does 'qstat -f jid' gives?
>
>
> On Tue, 30 Oct 2007, Preethi Chockalingam wrote:
>
>> Hi Rishi,
>>
>> I checked my pbs_server and mom logs.. I dont find any error..
>> I am able to scp from all nodes in the cluster to the server node.. But 
>> still the output and error files are not created.
>> Wat else do u think could be wrong?
>>
>> Thanks,
>> -Preethi
>>
>> ----- Original Message ----
>> From: rishi pathak <[EMAIL PROTECTED]>
>> To: Preethi Chockalingam <[EMAIL PROTECTED]>
>> Cc: mauiusers@supercluster.org
>> Sent: Tuesday, 30 October, 2007 11:36:22 AM
>> Subject: Re: [Mauiusers] Output and error files are missing
>>
>> HI,
>>  Check your mom logs and pbs_server logs for 'post job file processing 
>> error'.
>> Also check if you can rsh/rcp(as a cluster user) from any compute node to 
>> the node where pbs_server is running.
>> This has not got any relation to maui.
>>
>> I suggest you to post mom_logs and server_logs for better identificatino of 
>> the problem.
>>
>>
>>
>> On 10/30/07, Preethi Chockalingam <[EMAIL PROTECTED]> wrote:
>> Hi all,
>>
>> I have been integratinf Maui and Torque. When I submit jobs through torque 
>> they appear in state 'E' and the job comes out of the queue.
>>
>> I am not able to find th output and input files anywhere.
>>
>> Any suggestions on this please??
>>
>> Thanks in Advance,
>> Preethi.C
>>
>>
>>
>> Save all your chat conversations. Find them online.
>>
>> ___
>> mauiusers mailing list
>> mauiusers@supercluster.org
>> http://www.supercluster.org/mailman/listinfo/mauiusers
>>
>>
>>
>>
>>
>> --
>> Regards--
>> Rishi Pathak
>>


  Bring your gang together - do your thing. Go to 
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Re: Re: Re: [Mauiusers] Output and error files are missing

2007-10-30 Thread Jan Ploski 
Preethi Chockalingam <[EMAIL PROTECTED]> schrieb am 10/30/2007 
10:57:50 AM:

> Hi,
> 
> How do I check the maximum space of spool directory?? How do I 
> resolve the prob?? Should I increase it??

Just check your disk space with df. This is not TORQUE-specific.

Regards,
Jan Ploski
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Re: Re: [Mauiusers] Output and error files are missing

2007-10-30 Thread Preethi Chockalingam 
Hi,

How do I check the maximum space of spool directory?? How do I resolve the 
prob?? Should I increase it??

Thanks,
-Preethi.C

- Original Message 
From: Jan Ploski <[EMAIL PROTECTED]>
To: Preethi Chockalingam <[EMAIL PROTECTED]>
Cc: mauiusers@supercluster.org
Sent: Tuesday, 30 October, 2007 2:07:07 PM
Subject: Re: Re: [Mauiusers] Output and error files are missing

[EMAIL PROTECTED] schrieb am 10/30/2007 08:19:43 AM:

> Hi Rishi,
> 
> I checked my pbs_server and mom logs.. I dont find any error.. 
> I am able to scp from all nodes in the cluster to the server node.. 
> But still the output and error files are not created. 
> Wat else do u think could be wrong?

Maybe you are running out of disk space in the spool directory on the 
target node.

Regards,
Jan Ploski


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Re: [Mauiusers] Output and error files are missing

2007-10-30 Thread Preethi Chockalingam 
Hi,

There are no error messages reg scp and ssh.. on pbs_mom node.
Job status displays the name of the error and output path, but I dont find the 
files in the specified path.

Thanks
-Preethi


- Original Message 
From: Alexander Piavka <[EMAIL PROTECTED]>
To: Preethi Chockalingam <[EMAIL PROTECTED]>
Cc: rishi pathak <[EMAIL PROTECTED]>; mauiusers@supercluster.org
Sent: Tuesday, 30 October, 2007 1:43:07 PM
Subject: Re: [Mauiusers] Output and error files are missing


  Look for scp/ssh errors in syslog messages on pbs_mom node
what does 'qstat -f jid' gives?


On Tue, 30 Oct 2007, Preethi Chockalingam wrote:

> Hi Rishi,
>
> I checked my pbs_server and mom logs.. I dont find any error..
> I am able to scp from all nodes in the cluster to the server node.. But still 
> the output and error files are not created.
> Wat else do u think could be wrong?
>
> Thanks,
> -Preethi
>
> - Original Message 
> From: rishi pathak <[EMAIL PROTECTED]>
> To: Preethi Chockalingam <[EMAIL PROTECTED]>
> Cc: mauiusers@supercluster.org
> Sent: Tuesday, 30 October, 2007 11:36:22 AM
> Subject: Re: [Mauiusers] Output and error files are missing
>
> HI,
>  Check your mom logs and pbs_server logs for 'post job file processing error'.
> Also check if you can rsh/rcp(as a cluster user) from any compute node to the 
> node where pbs_server is running.
> This has not got any relation to maui.
>
> I suggest you to post mom_logs and server_logs for better identificatino of 
> the problem.
>
>
>
> On 10/30/07, Preethi Chockalingam <[EMAIL PROTECTED]> wrote:
> Hi all,
>
> I have been integratinf Maui and Torque. When I submit jobs through torque 
> they appear in state 'E' and the job comes out of the queue.
>
> I am not able to find th output and input files anywhere.
>
> Any suggestions on this please??
>
> Thanks in Advance,
> Preethi.C
>
>
>
> Save all your chat conversations. Find them online.
>
> ___
> mauiusers mailing list
> mauiusers@supercluster.org
> http://www.supercluster.org/mailman/listinfo/mauiusers
>
>
>
>
>
> -- 
> Regards--
> Rishi Pathak
>
>
>  Bring your gang together - do your thing. Go to 
> http://in.promos.yahoo.com/groups


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Re: Re: [Mauiusers] Output and error files are missing

2007-10-30 Thread Jan Ploski 
[EMAIL PROTECTED] schrieb am 10/30/2007 08:19:43 AM:

> Hi Rishi,
> 
> I checked my pbs_server and mom logs.. I dont find any error.. 
> I am able to scp from all nodes in the cluster to the server node.. 
> But still the output and error files are not created. 
> Wat else do u think could be wrong?

Maybe you are running out of disk space in the spool directory on the 
target node.

Regards,
Jan Ploski
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Re: [Mauiusers] Output and error files are missing

2007-10-29 Thread Preethi Chockalingam 
Hi Rishi,

I checked my pbs_server and mom logs.. I dont find any error.. 
I am able to scp from all nodes in the cluster to the server node.. But still 
the output and error files are not created. 
Wat else do u think could be wrong?

Thanks,
-Preethi

- Original Message 
From: rishi pathak <[EMAIL PROTECTED]>
To: Preethi Chockalingam <[EMAIL PROTECTED]>
Cc: mauiusers@supercluster.org
Sent: Tuesday, 30 October, 2007 11:36:22 AM
Subject: Re: [Mauiusers] Output and error files are missing

HI,
   Check your mom logs and pbs_server logs for 'post job file processing error'.
Also check if you can rsh/rcp(as a cluster user) from any compute node to the 
node where pbs_server is running.
This has not got any relation to maui.

I suggest you to post mom_logs and server_logs for better identificatino of the 
problem.



On 10/30/07, Preethi Chockalingam <[EMAIL PROTECTED]> wrote:
Hi all,
 
I have been integratinf Maui and Torque. When I submit jobs through torque they 
appear in state 'E' and the job comes out of the queue.
 
I am not able to find th output and input files anywhere.
 
Any suggestions on this please?? 
 
Thanks in Advance,
Preethi.C



Save all your chat conversations. Find them online.

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-- 
Regards--
Rishi Pathak


  Bring your gang together - do your thing. Go to 
http://in.promos.yahoo.com/groups___
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Re: [Mauiusers] Output and error files are missing

2007-10-29 Thread rishi pathak 
HI,
   Check your mom logs and pbs_server logs for 'post job file processing
error'.
Also check if you can rsh/rcp(as a cluster user) from any compute node to
the node where pbs_server is running.
This has not got any relation to maui.

I suggest you to post mom_logs and server_logs for better identificatino of
the problem.


On 10/30/07, Preethi Chockalingam <[EMAIL PROTECTED]> wrote:
>
> Hi all,
>
> I have been integratinf Maui and Torque. When I submit jobs through torque
> they appear in state 'E' and the job comes out of the queue.
>
> I am not able to find th output and input files anywhere.
>
> Any suggestions on this please??
>
> Thanks in Advance,
> Preethi.C
>
> --
> Save all your chat conversations. Find them 
> online.
>
> ___
> mauiusers mailing list
> mauiusers@supercluster.org
> http://www.supercluster.org/mailman/listinfo/mauiusers
>
>


-- 
Regards--
Rishi Pathak
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