Hi Daniel...
On Wed, 2015-07-01 at 23:09 +0200, Daniel Dörr wrote:
> Would you recommend to partition each input sequence into multiple records of
> a multi-fasta file so as to omit large masked regions? As I understood from
> the manual and from previous posts on this mailing list, progressive
Hi Aaron,
Thank you for the quick and spot on reply.
>> I recently started using progressiveMauve to align large eukaryotic genomes
>> and ran into some problems:
>>
>> 1) the studied genomes are repeat masked (i.e. contain long stretches of
>> Ns). When extracting homologous segments of the
Hi Daniel, nice to hear from you. Replies below.
On Tue, 2015-06-30 at 16:46 +0200, Daniel Dörr wrote:
> Dear Aaron,
>
> I recently started using progressiveMauve to align large eukaryotic genomes
> and ran into some problems:
>
> 1) the studied genomes are repeat masked (i.e. contain long st
Dear Aaron,
I recently started using progressiveMauve to align large eukaryotic genomes and
ran into some problems:
1) the studied genomes are repeat masked (i.e. contain long stretches of Ns).
When extracting homologous segments of the input genomes from the backbone file
I found that some a
