Dear all,
I have had problems using benzonase nuclease to remove DNA from bacterial (E. 
coli) lysates, from which I am purifying a ssDNA-binding protein.  The problem 
is, that I want to purify a DNA-free protein, and benzonase did work for that, 
but then of course I need to remove the benzonase from the preparation, because 
I later want to use this protein in experiments containing DNA, and benzonase 
proved to be difficult to completely remove.  I still had nuclease activity in 
my "purified" protein.  I am planning to try the cyanase nuclease from 
Ribosolutions Inc., since they claim it is faster than benzonase or DNase, and 
is more easily removed after use, with the "inactivation resin" that they 
provide with the enzyme.  Does anyone have an opinion on what is your favorite 
nuclease for removing DNA from bacterial lysates, and that can then be removed 
itself also?  DNase, benzonase, or cyanase..?

Thank you in advance,

Paul Phelan
Tufts University School of Medicine
Biochemistry
Boston

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