[mitk-users] ManualSegmentationToSurfaceFilter

2016-05-31 Thread Tobias Stein
Hi,

 

how can I include the mitkManualSegmentationToSurfaceFilter? If I try to
include the header it is not found. Do I have to activate a hook in CMake?

 

Thanks,

Tobias

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Re: [mitk-users] Image Cropper -> AffineImageCropperInteractor

2016-05-31 Thread Nil Goyette
Hi All,

Stefan, no, I didn't miss that. And as I wrote, the interactor is also 
broken on the MITK Workbench so my code is irrelevant here.

Any news on this? I was going to start coding my own but I prefer asking 
before, in case someone is already working on it.

Nil

Le 2016-04-27 à 11:02, Kislinskiy, Stefan a écrit :
> Maybe you missed the unusual state machine / event config combination of the 
> fixed image cropper?
> https://github.com/MITK/MITK/blob/master/Plugins/org.mitk.gui.qt.imagecropper/src/internal/QmitkImageCropper.cpp#L362-365
>
> Best,
> Stefan
>
> -Original Message-
> From: Nil Goyette [mailto:nil.goye...@imeka.ca]
> Sent: Mittwoch, 27. April 2016 15:27
> To: Kislinskiy, Stefan; Wegner; mitk-users@lists.sourceforge.net
> Subject: Re: AW: [mitk-users] Image Cropper -> AffineImageCropperInteractor
>
> HI Stefan and Ingmar,
>
> "I guess, you're not working with the 2016.03 release / latest master branch?"
> Yes, I was. You made me doubt so I downloaded a fresh 2016.03 installer and 
> tested with several images.
>
> I can see 2 "modes", either
> - the mouse is reversed (go farther to make the BO smaller) but the scaling 
> behavior is correct. The majority of my images have this problem.
> - the mouse is not reversed but the scaling behavior is horrible. As 
> explained in my last message, each ctrl-right-click+move makes the BO smaller 
> in all directions, wherever I go. Here's an image where I can see this:
> https://drive.google.com/file/d/0B6we0HAWUUiEMkx3VS1fb21iVzg/view?usp=sharing
>
> I don't actually use the plugin, I'm just testing the 
> AffineImageCropperInteractor with it because I need it :)
>
> Nil
>
> Le 2016-04-27 à 02:43, Kislinskiy, Stefan a écrit :
>> Hi Nil and Ingmar,
>>
>> as we originally planned to include the new image cropper in the 2016.03 
>> release, we didn't fix the current image cropper (which broke somewhere 
>> since the 2015.05 release) just until quite recently, to have a working 
>> image cropper for the 2016.03 release. For me, it's working fine now. I 
>> guess, you're not working with the 2016.03 release / latest master branch?
>>
>> As Ingmar said, we improved/rewrote the image cropper but unfortunately it 
>> just didn't make it into 2016.03. However, we'll merge the new image cropper 
>> very soon to replace the current one. We'll keep you up-to-date.
>>
>> Best,
>> Stefan
>>
>> 
>> Von: Wegner [iweg...@gmx.de]
>> Gesendet: Dienstag, 26. April 2016 21:09
>> An: Nil Goyette; mitk-users@lists.sourceforge.net
>> Betreff: Re: [mitk-users] Image Cropper ->
>> AffineImageCropperInteractor
>>
>> Hi Nil,
>> I just heard from the users meeting that the mitk team was working for
>> a replacement of that image cropper plugin!
>>
>> For the time being try to pick the corners of the square from the
>> inside and then to move and resize it (right, middle, left mouse
>> button). I remember that when you cross the middle the sizing inverts
>> so a size decrease turned into an increase.
>> Tricky but who would have known that this plugin would be used from so
>> many users!
>>
>> Best,
>> Ingmar
>>
>> Am 26.04.2016 um 17:49 schrieb Nil Goyette:
>>> Hi all,
>>>
>>> I was searching my good old Ctrl-click AffineInteractor and finally
>>> found it in AffineImageCropperInteractor. A free 3D interactor is
>>> really nice, but... it's unusable now :(
>>>
>>> The translation part works perfectly, but the scaling (right mouse
>>> button) is horrible. Each time I right-click+move, the bounding
>>> object gets smaller in all dimensions. So I try to fix the other
>>> dimensions and fall in the same trap! Again and again.
>>>
>>> I tought the bug was in my code but I have the same problem in the
>>> workbench. Try it! It's really hard now to place a BO around the
>>> things you want.
>>>
>>> Nil

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[mitk-users] CFP: MICCAI CLIP 2016 Workshop on Clinical Image-based Procedures: Translational Research in Medical Imaging

2016-05-31 Thread Cristina Oyarzun
CALL FOR PAPERS
MICCAI 2016 Workshop on
Clinical Image-based Procedures: Translational Research in Medical Imaging


October 17, 2016
Athens, Greece

Website:http://miccai-clip.org/
==
==

SCOPE

 The outstanding proliferation of medical image applications has created a
need for greater study and scrutiny of the clinical application and
validation of such methods. New strategies are essential to ensure a smooth
and effective translation of computational image-based techniques into the
clinic. For these reasons CLIP 2015’s major focus is on translational
research filling the gaps between basic science and clinical applications.
A highlight of the workshop is the subject of strategies for personalized
medicine to enhance diagnosis, treatment and interventions. Authors are
encouraged to submit work centered on specific clinical applications,
including techniques and procedures based on comprehensive clinical image
data. Submissions related to applications already in use and evaluated by
clinical users are particularly encouraged. The event will bring together
world-class specialists to present ways to strengthen links between
computer scientists and engineers, and clinicians.


TOPICS

*Strategies for patient-specific and anatomical modeling to support
planning and interventions

*Clinical studies employing advanced image-guided methods

*Clinical translation and validation of image-guided systems

*Current challenges and emerging techniques in image-based procedures

*Identification of parameters and error analysis in image-based procedures

*Multimodal image integration for modeling, planning and guidance

*Clinical applications in open and minimally invasive procedures




PAPER SUBMISSION

Papers will be limited to eight pages following the MICCAI submission
guidelines. Prospective authors should refer to the Paper Submission
section on the workshop website for details on how to submit papers to be
presented at the workshop.
All submissions will be peer-reviewed by at least 2 members of the program
committee. The selection of the papers will be based on the significance of
results, novelty, technical merit, relevance and clarity of presentation.
Papers will be presented in a day long single track workshop starting with
plenary sessions.
Accepted papers will be published as a proceedings volume in the Springer
Lecture Notes in Computer Science (LNCS) series after the workshop.

WORKSHOP FORMAT

Accepted papers will be presented in a day long single track workshop. The
final program will consist of invited speakers and original papers with
time allocated for discussions. Electronic proceedings will be arranged for
all of the papers presented at the workshop.

IMPORTANT DATES

* June 10, 2016: Paper submission due date
* July 10, 2016: Notification of acceptance
* July 17, 2016: Final camera-ready paper submission deadline

CONTACT

Inquires about the workshop should be sent to the Information Desk (
i...@miccai-clip.org).

ORGANIZERS (in alphabetical order)

Klaus Drechsler (Fraunhofer IGD, Germany)
Marius Erdt (Fraunhofer IDM@NTU, Singapore)
Miguel González Ballester (ICREA - Universitat Pompeu Fabra, Spain)
Marius George Linguraru (Children's National Medical Center, USA)
Cristina Oyarzun Laura (Fraunhofer IGD, Germany)
Yoshinobu Sato (Nara Institute of Science and Technology, Japan)
Raj Shekhar (Children's National Medical Center, USA)
Stefan Wesarg (Fraunhofer IGD, Germany)


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What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are 
consuming the most bandwidth. Provides multi-vendor support for NetFlow, 
J-Flow, sFlow and other flows. Make informed decisions using capacity 
planning reports. https://ad.doubleclick.net/ddm/clk/305295220;132659582;e___
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