[MORPHMET] Replicating the scores and Mahalanobis distance

2019-06-07 Thread 'Angelo Emmanuel Ho' via MORPHMET
distance of each group? I will use the Mahalanobis distance for the minimum spanning tree and dendogram to compare the minimum spanning tree and dendogram of the original sample size? Thank you very much. -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org

[MORPHMET] An R code for full Procrustes mean shape by GPA

2019-06-05 Thread 'Angelo Emmanuel Ho' via MORPHMET
Hello! I would like to ask for help as I use the book of Dryden and Mardia, "Statistical Shape Analysis with Application in R"? I cannot find where in the book (or maybe I just overlooked), how did he plot the mean shapes in Figure 8.4. Thank you very much. -- MORPHMET may be ac

[MORPHMET] Integrated Morphometrics Package Installer

2019-06-04 Thread 'Angelo Emmanuel Ho' via MORPHMET
appreciated. Thank you very much. -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving emails from it, send an email t

[MORPHMET] morphmet - 1000 subscribers!

2019-05-19 Thread MORPHMET
I note that we recently have achieved 1000 subscribers to morphmet! Caveat 1: Over the years, some have removed themselves from the list or asked me to remove them. So, there have actually been more than 1000 people subscribing, but we have never had 1000 subscribers on the list at the same

Re: [MORPHMET] morphmet - list problems

2019-05-19 Thread morphmet
to try to see what is going on. For now, I have no idea if your individual posts to the list (including this one - fourth attempt) will appear. In the meantime, please be patient. -the moderator -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org -- MORPHMET may

[MORPHMET] Re: PREPRINT: between-group principal components analysis (bgPCA)

2019-05-18 Thread MORPHMET
and dissertations based on this method once we knew how bad it was. His biorxiv upload and his announcement of it on morphmet were not a surprise to us. There were emails exchanged about the need to warn users. At the time, Fred told me that he needed to go ahead with the biorxiv upload

[MORPHMET] Re: PREPRINT: between-group principal components analysis (bgPCA)

2019-05-16 Thread MORPHMET
uite different from mine. This fragment, particularly its style of simulating and reporting, may have served later as the basis of the second of the two papers as I referred to it both in my Monday morphmet posting and in my biorxiv preprint. (I say "may have" because I have n

[MORPHMET] PREPRINT: between-group principal components analysis (bgPCA)

2019-05-14 Thread MORPHMET
627448v1 For those of you who were at the March meeting, this is the argument (complete with formulas) defending my stern condemnation there. I won't try to summarize it in this morphmet note -- if you're interested, just read the abstract on page 1 of the link. For those of you who have already

Re: [MORPHMET] How to fix erroneous 3D coordinates took by microscribe

2019-05-07 Thread morphmet
141.0176474.3985 90.9274 140.2106477.6371 85.2512 140.7932478.2403 I would apreciate if somebody could help me. Please don't hesitate to ask me for more details. King regards Azadeh -- MORPHMET may be accessed via its webpage at http://www.morphometr

[MORPHMET] Re: New Article: Reflections on a Biometrics of Organismal Form

2019-04-30 Thread MORPHMET
-springer-com.proxy.lib.fsu.edu/journal/13752 -ds [the MORPHMET moderator] On Tuesday, April 30, 2019 at 11:01:15 AM UTC-4, MORPHMET wrote: > > [Posted on behalf of Dr. Bookstein] > > Dear MorphMetters, > > I'm happy to announce that my paper "Reflections on a Biometrics of >

[MORPHMET] New Article: Reflections on a Biometrics of Organismal Form

2019-04-30 Thread MORPHMET
urces and the rhetoric of biological explanations of organismal form both over evolution and over development. As always I welcome all comments on these ideas, enthusiastic or otherwise. Fred Bookstein -- MORPHMET may be accessed via its webpage at http://ww

[MORPHMET] 2019 CALL FOR NOMINATIONS: The Rohlf Medal for Excellence in Morphometrics

2019-02-18 Thread morphmet
r findings for which the Rohlf Medal was awarded. -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving emails fr

Re: [MORPHMET] MorphoJ: problem with reading the tps files

2019-01-02 Thread morphmet
1335,0 797,0 1429,0 559,0 1477,0 679,0 1503,0 391,0 1217,0 485,0 1093,0 533,0 914,0 880,0 809,0 849,0 715,0 707,0 802,0 496,0 632,0 IMAGE=3572.jpg ID=0 The option "tps" was chosen. What can be wrong? -

[MORPHMET] Geometric morphometrics of nested symmetries unravels hierarchical inter- and...[published version]

2018-12-22 Thread 'Yoland SAVRIAMA' via MORPHMET
-00014 FINLAND -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving emails from it, send an email to morphmet+unsubscr...@morphometrics.org.

[MORPHMET] Bracketing phenogenotypic limits of mammalian hybridization [Published Version]

2018-11-28 Thread 'Yoland SAVRIAMA' via MORPHMET
14 FINLAND -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving emails from it, send an email to morphmet+unsubscr...@morphometrics.org.

[MORPHMET] Human Skull Evolution Video?

2018-11-19 Thread 'abbygracedrake' via MORPHMET
Hello! Has anyone ever used 3D data to make a video showing the shape changes in human skull evolution? For example warping from a chimpanzee to modern human? I think it would be great to have a movie like this to use when teaching human evolution. Thanks! Abby -- MORPHMET may be accessed

[MORPHMET] Re: Morphometrics in Solanaceas

2018-10-25 Thread 'Yoland SAVRIAMA' via MORPHMET
d > on the abiotic factors of the places the plants live in. > > I'll be so thankful for any guide that you can provide me. > -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups

[MORPHMET] New Book Announcement: A Course in Morphometrics for Biologists (Cambridge, University Press, 2018)

2018-10-10 Thread morphmet
any others as well. Fred Bookstein -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving

[MORPHMET] A Step-by-Step Guide For Geometric Morphometrics Of Floral Symmetry

2018-10-10 Thread 'Yoland SAVRIAMA' via MORPHMET
a, Y., & Klingenberg, C. P. (2011). Beyond bilateral symmetry: geometric morphometric methods for any type of symmetry. *BMC evolutionary biology*, *11*(1), 280. Best wishes! -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are su

[MORPHMET] Bracketing phenotypic limits of mammalian hybridization

2018-05-05 Thread 'Yoland SAVRIAMA' via MORPHMET
/10.1101/310789 Best wishes, Yoland Savriama -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving emails from it, sen

[MORPHMET] Geometric Morphometrics of Nested Symmetries

2018-04-26 Thread 'Yoland SAVRIAMA' via MORPHMET
6712; doi: https://doi.org/10.1101/306712 Best wishes, Yoland Savriama -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and

[MORPHMET] digitizing very variable leaves

2018-03-19 Thread 'Tina Klenovšek' via MORPHMET
Faculty of Natural Sciences and Mathematics Koroška cesta 160, 2000 Maribor, Slovenija T: +386 41 808 366 E: tina.klenov...@um.si<mailto:ime.prii...@um.si>, www.fnm.um.si<http://www.fnm.uni-mb.si> -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org ---

RE: [MORPHMET] digitizing very variable leaves

2018-03-15 Thread 'Tina Klenovšek' via MORPHMET
and species. In which user friendly program (like MorphoJ ☺) can I analyse outline data and visualize variability? Thank you again, Tina From: Joanna Lenarczyk [mailto:j.kowal...@botany.pl] Sent: Thursday, March 15, 2018 10:21 AM To: Tina Klenovšek Subject: Re: [MORPHMET] digitizing very variable leaves

RE: [MORPHMET] digitizing very variable leaves

2018-03-14 Thread 'Tina Klenovšek' via MORPHMET
: Wednesday, March 14, 2018 3:59 AM To: Tina Klenovšek Subject: Re: [MORPHMET] digitizing very variable leaves An assumption of the usual GMM methods is that shape variation is "small". I think these leaves exceed this quite a bit! Another problem is landmarks. How to match leaves with a

[MORPHMET] The ecological origins of snakes as revealed by skull evolution [New Publication]

2018-02-03 Thread 'Yoland SAVRIAMA' via MORPHMET
:10.1038/s41467-017-02788-3 Best wishes, Yoland Savriama -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving e

[MORPHMET] Re: Dino-lite/digital microscope

2017-12-01 Thread 'Heather Edgar' via MORPHMET
150x, would work for you. Best of luck! -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving emails from it, sen

[MORPHMET] New Publication on Geometric Morphometrics and Genetics of Floral Symmetry

2017-11-20 Thread 'Yoland SAVRIAMA' via MORPHMET
rter gene, FgANS in symmetry of flowers. Best wishes! Yoland Savriama -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop re

[MORPHMET] Post-doc in morphometric analysis in phenotypic evolution and embryonic development:

2017-08-15 Thread 'Isaac Salazar' via MORPHMET
. 2010 Mar 25;464(7288):583-6. 8. Interested candidates should check our group webpage: http://www.biocenter.helsinki.fi/salazar/index.html The center of Excellence webpage: http://www.biocenter.helsinki.fi/bi/evodevo/ECDev.html -- MORPHMET may be accessed via its webpage at http

[MORPHMET] New Bookstein GMM papers: PCA and Factor Analysis...

2017-08-07 Thread morphmet
g discussion emphasizes the desirability of superseding PCA by algorithms aimed at anthropological understanding rather than classification or ordination. -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Goo

Re: [MORPHMET] geiger rescale error

2016-12-06 Thread marko.djurakic via MORPHMET
al-of-mammalogy.it/public/journals/3/issue_241_complete_100.pdf ESTIMATE YOUR GLOBAL FOOTPRINT: http://www.footprintnetwork.org/en/index.php/GFN/page/calculators/ -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed t

Re: [MORPHMET] problems opening ply files

2016-10-28 Thread morphmet
! gabe wrobel -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from

Re: [MORPHMET] Trying to trace a quote

2016-10-19 Thread 'Abby Drake' via MORPHMET
at the time. > > Can anyone help? > > Cheers > Bill > -- > Bill Sellers, Tel: 01612751719, Mobile: 07857655786, > http://www.animalsimulation.org > University of Manchester, D1239 Michael Smith Building, Manchester, M13 > 9PT. > > -- > MORPHMET may be accesse

[MORPHMET] New publication on patterns of skull modularity and integration over postnatal ontogeny

2016-09-29 Thread 'Tina Klenovšek' via MORPHMET
, Slovenija T: (00 386) 041 808 366 E: tina.klenov...@um.si<mailto:tina.klenov...@um.si>, www.fnm.um.si<http://www.fnm.uni-mb.si/> -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the G

[MORPHMET] 2-year post-doc in artefact morphometrics

2016-08-27 Thread 'Felix Riede' via MORPHMET
Dear all, I am advertising a 2-year post-doctorial fellowship focused on artefact morphometrics (lithics). Those interested, please have a look here http://www.au.dk/om/stillinger/videnskabelige-stillinger/stillinger/Vacancy/show/852090/5285/; feel free to share. Yours, Felix -- MORPHMET

[MORPHMET] Please send links to online morphometrics resources...

2016-08-27 Thread MORPHMET
I would like to freshen up the online resource links on the www.morphometrics.org page. If you have any relevant active links, please post them so I can add them to the website (if I can remember how). Thanks, the MORPHMET Management -- MORPHMET may be accessed via its webpage at http

[MORPHMET] Append tps Curve to Landmarks

2016-08-24 Thread 'MrMupped223' via MORPHMET
ad decimal character in coordinates?.' I get the same error for tps files with and without removed control lines. I hope someone has an idea why this Problem shows up and can help me. Thanks Jan -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this

[MORPHMET] New paper by Bookstein: The inappropriate symmetries of multivariate statistical analysis in GM

2016-05-03 Thread MORPHMET
or send me your objections. Yours from Vienna with best wishes, Fred Bookstein -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and s

Re: [MORPHMET] Information on 3d portable scanner

2015-12-15 Thread morphmet
It is never too Darwin': Project therio.it <http://therio.it> : https://dibt.unimol.it/therio/ Assistan Editor Italian Journal of Zoology http://www.tandfonline.com/toc/tizo20/current#.Uuv5YfjANf9 -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org -- If a response is impo

Re: [MORPHMET] Information on 3d portable scanner

2015-12-15 Thread morphmet
Journal of Zoology http://www.tandfonline.com/toc/tizo20/current#.Uuv5YfjANf9 -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the

[MORPHMET] 750 subscribers to morphmet...

2015-10-27 Thread MORPHMET
Sitting in the Atlanta airport on my way back from the third Rohlf Medal award ceremony, and I just approved the 750th subscriber to the list. Congratulations to HS in Alaska who wins a free subscription to MORPHMET. :) -- MORPHMET may be accessed via its webpage at http

Re: [MORPHMET] Post-hoc calculation of PC and CV scores

2015-08-20 Thread morphmet
-- MORPHMET may be accessed via its webpage at http://www.morphometrics.org http://www.morphometrics.org/ To unsubscribe from this group and stop receiving emails from it, send an email to morphmet+unsubscr...@morphometrics.org mailto:morphmet+unsubscr...@morphometrics.org. -- MORPHMET may be accessed via

[MORPHMET] Re: The Rohlf Medal: 2015 Call for Nominations

2015-07-07 Thread MORPHMET
The deadline approaches: July 15, 2015! Time to get your applications in. On Monday, March 9, 2015 at 8:24:10 AM UTC-4, MORPHMET wrote: *2015 CALL FOR NOMINATIONS* *The Rohlf Medal* The Rohlf Medal was established in 2006 by the family and friends of F. James Rohlf to mark his 70th

Re: [MORPHMET] image names tps series

2015-06-10 Thread 'Elis Marina Damasceno Silva' via MORPHMET
Spezielle Zoologie und Evolutionsbiologie mit Phyletischem Museum Friedrich-Schiller-Universität Jena Germany This message was sent through https://webmail.uni-jena.de -- MORPHMET may be accessed via its webpage at http

Re: [MORPHMET] Question about centroid size

2015-06-04 Thread morphmet
) is the square root of the sum of squared distances between landmarks and their centroid. But I found also in papers that Centroid Size=1. I did not understand, if someone can help me please? Thanks -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org To unsubscribe from

[MORPHMET] Re: The Rohlf Medal: 2015 Call for Nominations

2015-05-31 Thread MORPHMET
A friendly reminder to start getting your nominations packages together. On Monday, March 9, 2015 at 1:24:10 PM UTC+1, MORPHMET wrote: *2015 CALL FOR NOMINATIONS* *The Rohlf Medal* The Rohlf Medal was established in 2006 by the family and friends of F. James Rohlf to mark his 70th

Re: [MORPHMET] Why exported raw coordinates differ from the imported in MorphoJ?

2015-05-25 Thread 'Marko Djurakic' via MORPHMET
coordinates differ from the imported one, except for the first specimen.* * * May I know why does this happen? Will this affect subsequent analyses? Your kind reply is highly appreciated! Best regards, Patrick -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org To unsubscribe

[MORPHMET] New paper by Bookstein: Integration, Disintegration, and Self-Similarity

2015-05-09 Thread MORPHMET
that comes up on offer. The title is what it is because there is an immediate application to integration studies in GMM whereby the Procrustes model must be replaced by something different as the null model for such studies. With best wishes, Fred Bookstein -- MORPHMET may be accessed via its

Re: [MORPHMET] Analysis of semilandmark data

2015-05-06 Thread morphmet
/44993.html -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org To unsubscribe from this group and stop receiving emails from it, send an email to morphmet+unsubscr...@morphometrics.org.

[MORPHMET] The Rohlf Medal: 2015 Call for Nominations

2015-03-09 Thread MORPHMET
or he will deliver a lecture that is appropriate for a broad audience, ranging from the exact sciences to the humanities, concerning the morphometric methodology, software, or findings for which the Rohlf Medal was awarded -- MORPHMET may be accessed via its webpage at http

Re: [MORPHMET] combining 3D datasets

2015-02-07 Thread morphmet
would like to append these data, based on the 4 landmarks they have in common. Could someone give me leads on the best software for doing this kind of manipulation? Thank you- -Bryan -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org -- MORPHMET may be accessed via its

Re: [MORPHMET] Testing Group Mean Differences, Nonparametric Framework

2015-02-07 Thread 'Marko Djurakic' via MORPHMET
...@dbe.uns.ac.rs -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org To unsubscribe from this group and stop receiving emails from it, send an email to morphmet+unsubscr...@morphometrics.org.

[MORPHMET] Re: Migration update

2014-10-03 Thread MORPHMET
I have just sent out the final re-re-...invitations to addresses on the old MORPHMET mailing list. When these expire, they addresses will be deleted, and anyone wanting to join will have to do so using the standard procedure. At this writing, we have 640 subscribers, which is pretty impressive

[MORPHMET] POSTDOCTORAL POSITION: Max Planck CIAA, IEA, Leipzig, Germany

2014-09-29 Thread MORPHMET
and the names of at least two referees should be sent as a single PDF document to Dr Kornelius Kupczik (kupczik (AT) eva (DOT) mpg (DOT) de). For further information about the Max Planck Weizmann Center see http://www.eva.mpg.de/mpwc. -- MORPHMET may be accessed via its webpage at http

Re: [MORPHMET] 3D stuff

2014-09-19 Thread morphmet
-- PhD Student Université de Perpignan Via Domitia, ED 544, UR MEDI-TERRA Centre Européen de Recherche Préhistorique de Tautavel, UMR CNRS 7194 -- EPCC - CERPT Avenue Léon-Jean Grégory 66720 Tautavel -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org -- MORPHMET may

[MORPHMET] Recent site outage

2014-09-11 Thread MORPHMET
Yesterday, the website and MORPHMET went down. The reason was that I asked to cancel account with the original (more expensive) service provider. When they did this, it wiped out something called the Zone File. I spent a significant part of today getting that restored. I think it works, now

[MORPHMET] Re: Migration update

2014-09-09 Thread MORPHMET
Delight has been achieved! I am delighted to report that membership in the new MORPHMET has surpassed the 600 subscriber mark - 603 as of this writing. Also, www.morphometrics.org has rec'd nearly 400 unique (by IP) visits from computers in 45 countries (see embedded map on the website). We

[MORPHMET] Re: Migration update

2014-08-21 Thread MORPHMET
Satisfaction obtained - currently at exactly 500 subscribers. Now, anticipating delight...600 The Management On Saturday, August 16, 2014 10:34:42 AM UTC-4, MORPHMET wrote: Hi, Folks. This is just an update on the ongoing migration to the new system. First, I am pleased to note that we

[MORPHMET] Joining - you don't need a gmail account.

2014-08-19 Thread MORPHMET
Please be aware that you DO NOT have to have a gmail account to subscribe to the list. That is only necessary if you want to use the web interface. You can request to join the list from any email address (as far as I know) by sending a message to: morphmet+subscr...@morphometrics.org

[MORPHMET] Migration update

2014-08-16 Thread MORPHMET
, you must be logged in via a Google account. If you do not have one (and are subscribed), you may post to the list by sending an email to morphmet@morphometrics.org or replying (to the list) to postings appearing in your email account. Users are initially set up to receive real-time email

[MORPHMET] The new MORPHMET is now open for business.

2014-08-08 Thread MORPHMET
I am pleased to announce that the new MORPHMET is open for business. Usage notes follow. 1) Anyone can view the list's content, but only subscribers can post. 2) moderation - Initial posts from all users will be moderated. When your first post is approved, moderation will be turned off. All

MORPHMET - progress, but not there, yet.

2014-07-31 Thread morphmet
I have been making progress preparing the migration to the new system, but not quite there, yet. I hope to have this done by or over the weekend. I am writing this to let you know that when MORPHMET does come back up, you will receive an invitation to join the new list (actually just the old

Re: Slicer question

2014-07-30 Thread morphmet
Original Message Subject:Re: Slicer question Date: Mon, 28 Jul 2014 21:16:07 -0400 From: m...@uw.edu To: morphmet@morphometrics.org morphmet@morphometrics.org Hi Donna, We use it daily, what would you like to know? *From:* morphmet_modera

MORPHMET - going down for upgrades

2014-07-30 Thread morphmet
It is my intention to take morphmet down shortly (today?). I believe I have cleared all pending postings and subscription requests. If all goes well, it should be down for a few hours or a couple of days. Most likely the latter to give me a chance to test the new system. If all goes well

Fwd: Re: Image rotation data loss

2014-06-29 Thread morphmet
Original Message Subject: Re: Image rotation data loss Date: Sun, 29 Jun 2014 03:38:32 -0400 From: Dennis E. Slice dsl...@morphometrics.org To: morphmet@morphometrics.org First guess would be your landmarks are out of order on one or more specimens. You can check

ANNOUNCEMENT: morphometrics.org to go down for upgrades

2014-04-03 Thread morphmet
Sorry for jumping the queue, but... Over time, we have had a number of problems with message distribution on MORPHMET. The fundamental issue is that when multiple messages are distributed the host sometimes shuts down the list thinking it is spam. We believe the problem ultimately arises from

RE: bilat.symmetry output in geomorph

2013-07-17 Thread morphmet
Original Message Subject:RE: bilat.symmetry output in geomorph Date: Sun, 14 Jul 2013 18:30:13 -0400 From: Adams, Dean [EEOBS] dcad...@iastate.edu To: morphmet@morphometrics.org morphmet@morphometrics.org CC: Dean Adams (dcad...@iastate.edu) dcad

possible duplicate posts

2013-07-17 Thread morphmet
Dear Morphmeters, I may sent out some duplicate messages from the past few days - some seemed familiar, though not in my personal archive. If so, I apologize. -the morphmet mod (dslice)

Re: Morpheus: java versions

2013-07-03 Thread morphmet
Thought I would post an update. On one system running Apple OS X 10.8.4, I uninstalled Apple Java 1.6(1) and installed Oracle Java 1.7(2). Morpheus runs just fine in this environment, and there is no need to run the mac_os_x_prepare script. jEdit(3) is still partially broken, but looking

RE: tps format problem reading in R

2013-07-03 Thread morphmet
Original Message Subject: RE: tps format problem reading in R Date: Wed, 3 Jul 2013 11:32:55 -0400 From: Adams, Dean [EEOBS] dcad...@iastate.edu To: morphmet@morphometrics.org morphmet@morphometrics.org Hi John, There were two issues here, and both of which have easy fixes

Fwd: Re: Morpheus Java Error

2013-06-28 Thread morphmet
Original Message Subject: Re: Morpheus Java Error Date: Fri, 28 Jun 2013 12:14:20 -0400 From: Dennis E. Slice dsl...@morphometrics.org To: morphmet@morphometrics.org Thanks, we are trying to set up a database of tested systems. I will post a report on OS/Java version

Remembrances of Robert Sokal

2012-10-19 Thread morphmet
[Added to the Announcements page at www.morphometrics.org -the morphmet moderator (dslice)] Remembrances of Robert Sokal Save the date: Sunday November 18, 2-4 P.M., Wang Center Chapel at Stony Brook University Robert Sokal passed away last April and his funeral and memorial service were

RE: multi-class ANOVA analogue for geometric morphometrics

2012-06-07 Thread morphmet
Original Message Subject: RE: multi-class ANOVA analogue for geometric morphometrics Date: Mon, 4 Jun 2012 14:59:23 -0400 From: F. James Rohlf ro...@life.bio.sunysb.edu Reply-To: ro...@life.bio.sunysb.edu Organization: Stony Brook University To: morphmet@morphometrics.org

RE: CV shape variation

2012-06-07 Thread morphmet
Original Message Subject:RE: CV shape variation Date: Mon, 4 Jun 2012 15:05:53 -0400 From: F. James Rohlf ro...@life.bio.sunysb.edu Reply-To: ro...@life.bio.sunysb.edu Organization: Stony Brook University To: morphmet@morphometrics.org I am not sure

PhD in morphological evolution

2012-05-25 Thread morphmet
Original Message Subject: PhD in morphological evolution Date: Wed, 23 May 2012 05:35:58 -0400 From: coue...@mnhn.fr To: morphmet@morphometrics.org Hello, You'll find below a PhD subject proposed to the Ecole Pratique des Hautes Etudes (France) The subject (and ONE applicant

tpsUtil update

2012-05-25 Thread morphmet
Original Message Subject:tpsUtil update Date: Wed, 23 May 2012 21:46:50 -0400 From: F. James Rohlf ro...@life.bio.sunysb.edu Reply-To: ro...@life.bio.sunysb.edu Organization: Stony Brook University To: morphmet@morphometrics.org I have just uploaded

Geometric Morphometrics courses

2012-05-25 Thread morphmet
Original Message Subject: Geometric Morphometrics courses Date: Fri, 25 May 2012 05:06:01 -0400 From: Soledad Esteban soledad.este...@icp.cat To: morphmet@morphometrics.org Dear colleagues: This e-mail is to inform you of some courses on Geometric Morphometrics, which may

Re: EVAN Toolbox lighting problem

2012-05-19 Thread morphmet
Original Message Subject:Re: EVAN Toolbox lighting problem Date: Thu, 17 May 2012 06:58:11 -0400 From: Helgi Pétur Gunnarsson helgipe...@gmail.com To: morphmet@morphometrics.org Hello Stephanie, The lighting sometimes can get messed up if you do a GPA

RE: Soft tissue analyse

2012-05-16 Thread morphmet
Original Message Subject: RE: Soft tissue analyse Date: Tue, 15 May 2012 01:03:26 -0400 From: Ivan Huber i...@randomtech.com To: morphmet@morphometrics.org morphmet@morphometrics.org Interesting problem,. What about either freezing the organ in a standard way or preserving

correcting for body size

2012-05-16 Thread morphmet
Original Message Subject: correcting for body size Date: Tue, 15 May 2012 11:03:28 -0400 From: Saad Arif arifs...@gmail.com To: morphmet@morphometrics.org Hello all, I have linear measurements for eye area and body size in Drosophila. I want to get residuals for eye area

Re: Soft tissue analyse

2012-05-16 Thread morphmet
Original Message Subject: Re: Soft tissue analyse Date: Wed, 16 May 2012 08:26:16 -0400 From: Kim van der Linde k...@kimvdlinde.com To: morphmet@morphometrics.org CC: morphmet morphmet_modera...@morphometrics.org I would suggest looking into techniques that go beyond

Re: correcting for body size

2012-05-16 Thread morphmet
Original Message Subject: Re: correcting for body size Date: Wed, 16 May 2012 08:30:33 -0400 From: Kim van der Linde k...@kimvdlinde.com To: morphmet@morphometrics.org CC: morphmet morphmet_modera...@morphometrics.org You effectively ask for an allometric regression. 1. take

EVAN Toolbox lighting problem

2012-05-16 Thread morphmet
Original Message Subject:EVAN Toolbox lighting problem Date: Wed, 16 May 2012 16:21:40 -0400 From: Stephanie Kozakowski stephanie.kozakow...@utoronto.ca To: morphmet@morphometrics.org Hi all, I am using the EVAN Toolbox v.1.52 and am having trouble getting

Re: Soft tissue analyse

2012-05-14 Thread morphmet
Original Message Subject: Re: Soft tissue analyse Date: Sun, 13 May 2012 13:04:45 -0400 From: Carmelo Fruciano c.fruci...@unict.it To: morphmet@morphometrics.org Dear all, I would like to quantify the shape of an soft tissue organ. However I am not sure what would

Re: Head Shape Question

2012-05-14 Thread morphmet
Original Message Subject:Re: Head Shape Question Date: Sun, 13 May 2012 14:15:46 -0400 From: kalpana das kkalpanaa1...@gmail.com To: morphmet@morphometrics.org Dear Dustin, I had somewhat similar kind of question.I used sliding semilandmark method to capture

Soft tissue analyse

2012-05-13 Thread morphmet
Original Message Subject:Soft tissue analyse Date: Wed, 9 May 2012 12:55:57 -0400 From: Julia Klaczko jklac...@gmail.com To: morphmet@morphometrics.org Dear all, I would like to quantify the shape of an soft tissue organ. However I am not sure what would

RE: permutations in TPSRegr and asymmetry in pictures

2012-05-02 Thread morphmet
Original Message Subject: RE: permutations in TPSRegr and asymmetry in pictures Date: Thu, 26 Apr 2012 22:07:27 -0400 From: F. James Rohlf ro...@life.bio.sunysb.edu Reply-To: ro...@life.bio.sunysb.edu Organization: Stony Brook University To: morphmet@morphometrics.org What

Re: Alternatives to Geomagic (UNCLASSIFIED)

2012-05-02 Thread morphmet
Correction as per Dr. Corner: archit...@headus.com.au should be archi...@headus.com.au. -the mod [dslice] On 5/1/12 11:38 PM, morphmet_modera...@morphometrics.org wrote: - Forwarded message from Corner, Brian D CIV (US) - Date: Tue, 1 May 2012

Re: Regression of Shape with size

2012-05-02 Thread morphmet
Original Message Subject:Re: Regression of Shape with size Date: Wed, 2 May 2012 10:09:13 -0400 From: Antigoni Kaliontzopoulou ant...@gmail.com To: morphmet@morphometrics.org Hello Kaplana, if your images were not made from the same distance and you don't

Re: Regression of Shape with size

2012-05-02 Thread morphmet
Original Message Subject: Re: Regression of Shape with size Date: Wed, 2 May 2012 17:01:05 -0400 From: F. James Rohlf ro...@life.bio.sunysb.edu Reply-To: ro...@life.bio.sunysb.edu To: Morphmet morphmet@morphometrics.org If you have the SVL for each specimen then you can use

CT Scan + MorphoJ

2012-04-25 Thread morphmet
Original Message Subject: CT Scan + MorphoJ Date: Wed, 18 Apr 2012 23:14:11 -0400 From: Gabrielle Openshaw gabrielle.opens...@gmail.com To: morphmet@morphometrics.org Hi all, Has anybody tried using CT scan data in MorphoJ? I want to analyse skull shape disparity and really

permutations in TPSRegr and asymmetry in pictures

2012-04-25 Thread morphmet
Original Message Subject: permutations in TPSRegr and asymmetry in pictures Date: Mon, 23 Apr 2012 07:16:58 -0400 From: andrea cardini alcard...@gmail.com To: morphmet@morphometrics.org Dear Morphometricians, please, has anyone got any experience with the different options

No Subject: one of the most remarkable, scientific artifacts of our time -the mod

2012-04-25 Thread morphmet
Original Message Date: Sun, 22 Apr 2012 07:59:15 -0700 From: Fred Bookstein f...@brainmap.stat.washington.edu To: morphmet_modera...@morphometrics.org April 22, 2012 Dear colleagues, Anybody who finds themselves anywhere near Vienna

MorphoJ and CVA

2012-04-25 Thread morphmet
Original Message Subject: MorphoJ and CVA Date: Wed, 25 Apr 2012 13:46:30 -0400 From: Robert Ward r.w...@bangor.ac.uk To: morphmet@morphometrics.org Please forgive me if I'm making an obvious error. I'm trying to reconcile different outputs relating to CVA results in MorphoJ

categorical variables in pls

2012-04-25 Thread morphmet
Original Message Subject: categorical variables in pls Date: Wed, 25 Apr 2012 16:46:51 -0400 From: Rodrigo Lima rodrigo.l...@mail.mcgill.ca To: morphmet@morphometrics.org morphmet@morphometrics.org Dear morphometricians, Does it make sense to use categorical variables

Announcement of Robert R. Sokal's Death from Mike Bell

2012-04-16 Thread morphmet
Original Message Subject: Announcement of Robert R. Sokal's Death from Mike Bell Date: Sun, 15 Apr 2012 23:01:28 -0400 From: Michael A. Bell mab...@life.bio.sunysb.edu Reply-To: mab...@life.bio.sunysb.edu To: morphmet@morphometrics.org CC: mab...@life.bio.sunysb.edu We

MorphoJ

2012-04-13 Thread morphmet
Original Message Subject: MorphoJ Date: Fri, 13 Apr 2012 09:31:57 -0400 From: John Elizabeth Cook jpc...@ptialaska.net To: morphmet@morphometrics.org Are there any online tutorials for MorphoJ?

Re: Strange tpsDig2 problem

2012-04-13 Thread morphmet
Original Message Subject:Re: Strange tpsDig2 problem Date: Tue, 10 Apr 2012 02:08:25 -0400 From: Saber Sadeghi sabersade...@yahoo.com To: morphmet@morphometrics.org Dear Karl at first you have to make a file for your samples' pictures with separate names

update to tpsUtil

2012-04-09 Thread morphmet
Original Message Subject:update to tpsUtil Date: Wed, 4 Apr 2012 22:28:00 -0400 From: F. James Rohlf ro...@life.bio.sunysb.edu Reply-To: ro...@life.bio.sunysb.edu Organization: Stony Brook University To: morphmet@morphometrics.org I have just

Next Engine scanner protocol

2012-04-09 Thread morphmet
Original Message Subject:Next Engine scanner protocol Date: Mon, 9 Apr 2012 18:01:31 +0200 From: Javier Santos javiersant...@hotmail.com To: Morphomet New Mailing List morphmet_modera...@morphometrics.org Hello morphometricians, I am working with snow vole

Question about integration indices compared at a common level of sampled population variance

2012-04-09 Thread morphmet
Original Message Subject:Question about integration indices compared at a common level of sampled population variance Date: Mon, 9 Apr 2012 14:41:49 -0400 From: Makedonska, Jana jmakedon...@albany.edu To: morphmet@morphometrics.org morphmet@morphometrics.org

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