__
>> (\ .-. .-. /_")
>> \\_//^\\_//^\\_//
>> `"` `"` `"`*
>>
>> learn more about them here: www.emmasherratt.com/caecilians
>>
>>
>>
>>
>> On 17 May 2016 at 01:32, filipe oliveira <
learn more about them here: www.emmasherratt.com/caecilians
>
>
>
>
> On 17 May 2016 at 01:32, filipe oliveira <filipe.fi...@gmail.com> wrote:
>
>> Hi,
>>
>> do you know how to save the PC values of the ancestral nodes estimated
>> with Square chang
://ucl.academia.edu/StacyHackner> Institute of Archaeology
UCL <http://blogs.ucl.ac.uk/researchers-in-museums/> Public & Cultural
Engagement
+44 (0) 7756 008875
about.me/stacytg <https://about.me/stacytg?promo=email_sig>
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Hi,
do you know how to save the PC values of the ancestral nodes estimated with
Square change Parsimony in MorphoJ?
Thank you.
Best
Filipe
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Best,
Zac Selden
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Esteban Herrera Collazos B.Sc.
Postgraduate Student at Pontificia Universidad Javeriana
Ichthyology Laboratory 108B Ed 53 - 3208320 Ext 4127
---
Estudiante de Posgrado en la Pontificia Universidad Javeriana
Laboratorio de Ictiol
Posgrado en la Pontificia Universidad Javeriana
> Laboratorio de Ictiología 108B Ed 53 - 3208320 Ext 4127
>
>
> --
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, Distinguished Professor, Emeritus. Ecology & Evolution
Research Professor, Anthropology
Stony Brook University
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with best wishes, Fred Bookstein
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eir studies.Detailed information for the new
special issue:http://www.hindawi.com/journals/bmri/si/651051/cfp/
Journal is in the SCI-exp index.Best regards.Dr Ilker ERCANLead Guest Editor
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Professor, Emeritus. Ecology & Evolution
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Stony Brook University
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INVESTI SUL FUTURO, FAI CRESCERE L’UNIVERSITÀ:
*DONA IL 5 PER MILLE ALLA SAPIENZA*
CODICE FISCALE *80209930587*
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NULL)
Error in model.frame.default(formula = ALL.means.super ~ mPCAALL$x, data =
NULL, :
invalid type (list) for variable 'ALL.means.super'
Thank you,
Brenna Hays
Research Assistant, M.S. Student
Nova Southeastern University, Oceanographic Center
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S and DENNIS E. SLICE.
> April 15, 2016 3:15, A 703/704
>
> Session 46 (Poster)
> Visualization and Materialization for High-dimensional Morphometric Data
> DENNIS E. SLICE, BENJAMIN J. POMIDOR, BRIAN D. CORNER, and F JAMES. ROHLF.
> April 16, 2016 , Atrium Ballroom A/B
>
&g
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gt;
> Session 34 (Podium)
> Procrustes-based vector-moving average models allow patterns of motion to
> be statistically distinguished
> K JAMES. SODA, PAUL H. MORRIS and DENNIS E. SLICE.
> April 15, 2016 3:15, A 703/704
>
> Session 46 (Poster)
> Visualization and Materialization for
16 , Atrium Ballroom A/B
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F. James Rohlf, Distinguished Professor, Emeritus. Ecology & Evolution
Research Professor, Anthropology
Stony Brook University
From: Collyer, Michael [mailto:michael.coll...@wku.edu]
Sent: Tuesday, April 5, 2016 5:29 AM
To: Brenna Hays <bkhays...@gmail.com<m
tion
Research Professor, Anthropology
Stony Brook University
From: Collyer, Michael [mailto:michael.coll...@wku.edu]
Sent: Tuesday, April 5, 2016 5:29 AM
To: Brenna Hays <bkhays...@gmail.com>
Cc: MORPHMET <morphmet@morphometrics.org>
Subject: Re: [MORPHMET] replacing df with prin
turns it into a list. I cannot find any other information
on this matter. Any help would be much appreciated.
Thanks,
Brenna Hays
Research Assistant, Master's Student
Nova Southeastern University
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http://www.morphometrics.org<http://www.morphometrics.or
search Assistant, Master's Student
Nova Southeastern University
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All the Best
Chrissy
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t
rd[ ,1, ]); min(AISMcoord[ ,1, ]); max(AISMcoord[ ,2, ]);
> min(AISMcoord[ ,2, ])
> [1] 0.3076018
> [1] -0.3717857
> [1] 0.2391025
> [1] -0.2434714
> > plot(AISMcoord[ ,1,1], AISMcoord[ ,2,1], asp=1, pch=21,
> bg="darkgoldenrod1", xlab="x", ylab="y", cex=1
image still has it's
> ID and it does but it seems to disapeerr once in MorphoJ.
>
> Please help!
>
> Chrissy
>
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ile). I have
> gone back to my file in tpsDig2 and checked that each image still has it's
> ID and it does but it seems to disapeerr once in MorphoJ.
>
> Please help!
>
> Chrissy
>
> --
> MORPHMET may be accessed via its webpage at http://www.morphometrics.org
> --
gone and
are replaced by numbers 0-19 (there are 20 samples in the file). I have
gone back to my file in tpsDig2 and checked that each image still has it's
ID and it does but it seems to disapeerr once in MorphoJ.
Please help!
Chrissy
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seum
Friedrich-Schiller-Universität Jena
Erbertstraße 1
07743 Jena
Germany
Phone: +49 (0)3641 9-49165
Fax:+49 (0)3641 9-49142
E-mail: patrick.arn...@uni-jena.de
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logy
Department of Statistics
Iowa State University
www.public.iastate.edu/~dcadams/
phone: 515-294-3834
-Original Message-
From: Carmelo Fruciano [mailto:c.fruci...@unict.it]
Sent: Monday, April 4, 2016 3:22 AM
To: morphmet@morphometrics.org
Subject: Re: [MORPHMET] Form Space?
Ariadne Sc
y of Technology - Brisbane,
Australia
Honorary Fellow - University of Catania - Catania, Italy
e-mail c.fruci...@unict.it
http://www.fruciano.it/research/
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Faculty of Life Sciences
University of Manchester
Michael Smith Building
Oxford Road
Manchester M13 9PT
United Kingdom
Web site: http://www.flywings.org.uk
E-mail: c...@manchester.ac.uk
Phone: +44 161 2753899
Skype: chris_klingenberg
***
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Sent: Thursday, March 31, 2016 5:51 AM
To: morphmet@morphometrics.org
Subject: Re: [MORPHMET] Richard Reyment (1926-2016)
I also am saddened to hear of Prof. Reyment's death. He kindly aided me in
Uppsala when I was traveling as a grad student to observe fossil primate
specimens, and he showe
gpagen
with a sliding function, and so forth so the new version of plotAllometry
should work, but I really want to plot in form space. It seems to me I'm
just missing something really easy. Is there a way to do this?
Best,
Ari
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Dear morphometricians,
many thanks to all those who either in emails directly to me or to
morphmet contributed to this discussion.
It was very interesting and instructive.
I have a lot of sympathy for Ian's point about what to do when one uses
an ANCOVA to test slopes and finds
edu/~dcadams/<http://www.public.iastate.edu/~dcadams/>
phone: 515-294-3834
-Original Message-
From: andrea cardini [mailto:alcard...@gmail.com]
Sent: Thursday, March 24, 2016 12:01 PM
To: morphmet@morphometrics.org<mailto:morphmet@morphometrics.org>
Subject: [MORPHMET] using regres
tatistics
Iowa State University
www.public.iastate.edu/~dcadams/<http://www.public.iastate.edu/~dcadams/>
phone: 515-294-3834
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.
I believe that Hansen and Bartoszek have warned about this in a paper in
Systematic Biology in 2012.
Joe
Joe Felsenstein j...@gs.washington.edu
Department of Genome Sciences and Department of Biology,
University of Washington, Box 355065, Seattle, WA 98195-5065 USA
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caricature of an example
to make my point. Sorry for any confusion.
Cheers,
Ian
dwor...@mcmaster.ca
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dimorphism of wing shape in the Drosophila melanogaster subgroup.,” *BMC
Evol Biol*, vol. 9, p. 110, 2009.
I hope this leads to useful discussion!
Cheers
Ian
dwor...@mcmaster.ca
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[mailto:alcard...@gmail.com]
Sent: Thursday, March 24, 2016 12:01 PM
To: morphmet@morphometrics.org
Subject: [MORPHMET] using regression residuals for other analyses
Dear All,
this is something that, I believe, has already come up in the past.
However, I'd like to check it again.
What are the issues
/journals/3/issue_241_complete_100.pdf
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Institut Català de Paleontologia Miquel Crusafont (ICP)
Campus de la Universitat Autònoma de Barcelona
Cerdanyola del Vallès (Barcelona). Spain
www.icp.cat
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,
Australia
E-mail address: alcard...@gmail.com, andrea.card...@unimore.it
WEBPAGE: https://sites.google.com/site/alcardini/home/main
FREE Yellow BOOK on Geometric Morphometrics:
http://www.italian-journal-of-mammalogy.it/public/journals/3/issue_241_complete_100.pdf
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nsland University of Technology - Brisbane,
Australia
Honorary Fellow - University of Catania - Catania, Italy
e-mail c.fruci...@unict.it
http://www.fruciano.it/research/
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---You received this message because you are subscr
te/alcardini/home/main>
>>
>>
>> FREE Yellow BOOK on Geometric Morphometrics:
>> http://www.italian-journal-of-mammalogy.it/issue/view/405
>> <http://www.italian-journal-of-mammalogy.it/issue/view/405>
>> or full volume at:
>>
dy at work on v1.6 so comments/questions/complaints welcome! : )
Best,
Aaron
Aaron M. Olsen
PhD Student
Organismal Biology & Anatomy, University of Chicago
Bird Division, Field Museum of Natural History
home.uchicago.edu/~aolsen/
--
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res is accounted for by/due to a certain term
> (digitization, preparation)?
> Best,
> Carmelo
>
>
>
> --
> Carmelo Fruciano
> Postdoctoral Fellow - Queensland University of Technology - Brisbane,
> Australia
> Honorary Fellow - University of Catania - Catania,
Australia
Honorary Fellow - University of Catania - Catania, Italy
e-mail c.fruci...@unict.it
http://www.fruciano.it/research/
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ad de Ciencias Naturales y Museo
Universidad de La Plata - Argentina
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ail_content=webmail>
<#1979225450_DDB4FAA8-2DD7-40BB-A1B8-4E2AA1F9FDF2>
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>
>
> --
> Patrick Arnold, M.Sc.
>
> wissenschaftlicher Mitarbeiter und Doktorand
> Institut für Spezielle Zoologie und Evolutionsbiologie
> mit Phyletischem Museum
> Friedrich-Schiller-Universität Jena
> Erbertstraße 1
> 07743 Jena
> Germany
>
> Phone: +49 (0)3641
AA1F9FDF2>
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trick Arnold, M.Sc.
>
> wissenschaftlicher Mitarbeiter und Doktorand
> Institut für Spezielle Zoologie und Evolutionsbiologie
> mit Phyletischem Museum
> Friedrich-Schiller-Universität Jena
> Erbertstraße 1
> 07743 Jena
> Germany
>
> Phone: +49 (0)3641 9-49165
> Fax:
y) since I think I that’s what it uses to match the LM
> array to the mesh.
>
>
>
> M
>
>
>
>
>
>
>
> *From:* morp...@morphometrics.org [mailto:
> morp...@morphometrics.org ] *On Behalf Of *Pere Ibáñez
> *Sent:* Thursday, March 10, 2016 7:38 AM
>
to the mesh.
M
From: morphmet@morphometrics.org [mailto:morphmet@morphometrics.org] On Behalf
Of Pere Ibáñez
Sent: Thursday, March 10, 2016 7:38 AM
To: MORPHMET <morphmet@morphometrics.org>
Subject: [MORPHMET] placePatch in Morpho (R)
I am using the function placePatch in Morpho: plac
Ascii PLY maybe?
I tried specifying the folder where my images are, but it didn't work (I
obtained a pxkxn array with only missing values -NAs-). May this occur
because my images are Binary PLY?
Thanks in advance!
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---
Yo
://crhrarchaeology.wordpress.com/morphometrics/gm-bibliography-project/)
> where this same text is posted (archaeologists are nothing if not
> redundant). Many thanks in advance for your contributions—I think that this
> can be a great resource.
>
>
>
> Best,
>
> Zac
&g
rarchaeology.wordpress.com/morphometrics/gm-bibliography-project
/) where this same text is posted (archaeologists are nothing if not
redundant). Many thanks in advance for your contributions-I think that this
can be a great resource.
Best,
Zac
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New study on dingoes!
Skulls indicate dingoes 'probably aren't going to disappear' through
cross-breeding
http://www.abc.net.au/news/2016-03-10/ct-scans-reveal-dominance-of-the-dingo
/7233296
Best,
Zac
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MORPHMET may be accessed via its webpage at http://www.morphometrics.org
>
> PS – Please don’t upload anything to this community—unless we later decide
> (as a community) to run with Zenodo. If we opt to go a different route,
> I’ll just delete this.
>
>
>
> Best,
>
> Zac
>
>
>
>
>
>
>
> *From:* morphmet@morphometrics.org [mailto:mo
, California 95192-0102
Phone: (408) 924-5279
E-mail: jonathan.hendri...@sjsu.edu
Website: http://www.deadsnails.com
--
--
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Professor, Emeritus. Ecology & Evolution
Research Professor, Anthropology
Stony Brook University
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To un
(as
a community) to run with Zenodo. If we opt to go a different route, I’ll just
delete this.
Best,
Zac
From: morphmet@morphometrics.org [mailto:morphmet@morphometrics.org] On Behalf
Of Robert Z. Selden, Jr.
Sent: Wednesday, March 09, 2016 11:00 AM
To: jonathan.hendri...@sjsu.edu
for uploading data/citations.
Best,
Zac
From: Jonathan Hendricks [mailto:jonathan.hendri...@sjsu.edu]
Sent: Wednesday, March 09, 2016 10:39 AM
To: Robert Z. Selden, Jr. <selden...@sfasu.edu>
Cc: bonhomme.vinc...@gmail.com; morphmet@morphometrics.org
Subject: Re: [MORPHMET] Crowds
bibliographies—one for publications, and
another for data?
Thoughts?
Best,
Zac
From: Vincent Bonhomme [mailto:bonhomme.vinc...@gmail.com]
Sent: Wednesday, March 09, 2016 10:14 AM
To: Robert Z. Selden, Jr. <selden...@sfasu.edu>
Cc: MORPHMET <morphmet@morphometrics.org>
Subject: R
>
>
>
> If you run into any issues, or just have questions, please forward those
> along.
>
>
>
> I’ve also added a link to my blog (
> https://crhrarchaeology.wordpress.com/morphometrics/gm-bibliography-project/)
> where this same text is posted (archaeologists are noth
ere this same text is posted (archaeologists are nothing if not
redundant). Many thanks in advance for your contributions-I think that this
can be a great resource.
Best,
Zac
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Cavalcanti for bringing these to my attention.
F. James Rohlf, Distinguished Professor, Emeritus. Ecology & Evolution
Research Professor, Anthropology
Stony Brook University
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that
there was this problem.
Reminder: use just the 32 bit versions of the tps software for now.
F. James Rohlf, Distinguished Professor, Emeritus. Ecology & Evolution
Research Professor, Anthropology
Stony Brook University
--
MORPHMET may be accessed via
4.1957 0.002 **
Residuals 18 0.00216529 0.00012029
Total 19 0.00314745
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
I believe, as a whole, I am either doing something wrong in my coding with
procD.lm, or interpreting it incorrectly. Any input or suggestions would be
, I am either doing something wrong in my coding with
procD.lm, or interpreting it incorrectly. Any input or suggestions would be
extremely helpful. Thank you!
Brenna
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eomorph”, ref = “Stable")
>
> Cheers!
> Mike
>
> Michael Collyer
>
> Associate Professor
> Biostatistics
> Department of Biology
> Western Kentucky University
> 1906 College Heights Blvd. #11080
> Bowling Green, KY 42101-1080
> Phone: 270-745-8765; Fax: 270-745
-1080
Phone: 270-745-8765; Fax: 270-745-6856
Email: michael.coll...@wku.edu<mailto:michael.coll...@wku.edu>
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d Evolutionary Research:
> http://www.wiley.com/bw/journal.asp?ref=0947-5745=1
> Hystrix, the Italian Journal of Mammalogy:
> http://www.italian-journal-of-mammalogy.it/
> --
> MORPHMET may be accessed via its webpage at http://www.morphometrics.org
> --- You received this
phenotypic variables within this association.
Best,
Philipp Mitteroecker
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. If
they work for you then they are ok to use but many experience crashes.
F. James Rohlf, Distinguished Professor, Emeritus. Ecology & Evolution
Research Professor, Anthropology
Stony Brook University
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Ph: +61 (0)3 8341 7423
Email: chips...@museum.vic.gov.au
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Does anyone know if morphologika2 still works with Windows 10?
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rdini/home/main
>
>
> FREE Yellow BOOK on Geometric Morphometrics:
> http://www.italian-journal-of-mammalogy.it/issue/view/405
> or full volume at:
> http://www.italian-journal-of-mammalogy.it/public/journals/3/issue_241_complete_100.pdf
>
> Editorial board for:
&g
t; I'm performing a PIC analysis on MorphoJ. I would like to know if
>> Brownian Model is assumed here.
>>
>> Thank you in advance.
>>
>> --
>> MORPHMET may be accessed via its webpage at http://www.morphometrics.org
>> ---
>> You received this m
ng evolutionary modularity.
> I'm performing a PIC analysis on MorphoJ. I would like to know if Brownian
> Model is assumed here.
>
> Thank you in advance.
>
> --
> MORPHMET may be accessed via its webpage at http://www.morphometrics.org
> ---
> You received this message becau
Dear all,
I'm studying evolutionary modularity.
I'm performing a PIC analysis on MorphoJ. I would like to know if Brownian
Model is assumed here.
Thank you in advance.
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isbane,
Australia
Honorary Fellow - University of Catania - Catania, Italy
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w.wiley.com/bw/journal.asp?ref=0947-5745=1
Hystrix, the Italian Journal of Mammalogy:
http://www.italian-journal-of-mammalogy.it/
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"M
n but
> I wouldn't expect that to influence the sliding of semilandmarks. Has
> anyone else encountered an issue like this with either 2D or 3D
> semilandmarks? As with all things R I expect the answer will be something
> like me omitting a comma somewhere so any suggestions yo
Hystrix, the Italian Journal of
Mammalogy: http://www.italian-journal-of-mammalogy.it/
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comma somewhere so any suggestions
you might have are welcome.
Best,
Ari
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.
Best,
Ari
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To: MORPHMET <morphmet@morphometrics.org>; morphmet_modera...@morphometrics.org
Subject: [MORPHMET] Software to join multiple slices derived from Computer
Tomography
Dear All
I recently obtained several CT scans from hominin crania. I used 3DSlicer 4.5
to robtain 3d meshes of such crania. How
Plata
Paseo del Bosque s/n. La Plata 1900. Argentina
Cel: 5492216795916. Fax: 54 221 4257527
https://unlp.academia.edu/DelgadoMiguel
http://www.cearqueologia.com.ar/
E-mail: medelg...@fcnym.unlp.edu.ar
*
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.dir,"/",names[i],sep=""),nland)
> }
> if(length(names)==1){
> dimnames(array.amira)[[3]]=list(names)}
> if(length(names)!=1){
> dimnames(array.amira)[[3]]=names}
> return(array.amira)
> }
>
>
> __
>
> Antonio Profi
r,"/",names[i],sep=""),nland)
}
if(length(names)==1){
dimnames(array.amira)[[3]]=list(names)}
if(length(names)!=1){
dimnames(array.amira)[[3]]=names}
return(array.amira)
}
______
Antonio Profico
PhD student
Department of Environmental Biolog
f Ecology, Evolution, and Organismal Biology
Department of Statistics
Iowa State University
www.public.iastate.edu/~dcadams/<http://www.public.iastate.edu/~dcadams/>
phone: 515-294-3834
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IMPORTANT: Would please report as to the OS you are using to run the
latest Morpheus et al.? OS X, Linux, Windows? Please include version.
And any notes on its operation.
-ds
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Crusafont (ICP)
Campus de la Universitat Autònoma de Barcelona
Cerdanyola del Vallès (Barcelona). Spain
www.icp.cat
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lution, and Organismal Biology
>
>Department of Statistics
>
> Iowa State University
>
> www.public.iastate.edu/~dcadams/
>
> phone: 515-294-3834
>
>
>
> *From:* Nicole Dzenowski [mailto:ndzenow...@gmail.com]
> *Sent:* Monday, February 1, 2016 9:18 PM
> *To:*
these issues.
Best,
Dean
Dr. Dean C. Adams
Professor
Department of Ecology, Evolution, and Organismal Biology
Department of Statistics
Iowa State University
www.public.iastate.edu/~dcadams/<http://www.public.iastate.edu/~dcadams/>
phone: 515-294-3834
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www.public.iastate.edu/~dcadams/<http://www.public.iastate.edu/~dcadams/>
phone: 515-294-3834
From: Nicole Dzenowski [mailto:ndzenow...@gmail.com]
Sent: Monday, February 1, 2016 9:18 PM
To: MORPHMET <morphmet@morphometrics.org>
Subject: [MORPHMET] Questions regarding correction f
the residuals and
then use a phylogenetic comparative method on those residuals and the size
data and then do another multivariate regression and then use the residuals
from that final regression as my new shape variables?
Any help or direction is greatly appreciated.
Thanks!
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