[MORPHMET] New pub

2018-03-08 Thread Paolo Piras
Hi folks,

I want to signal you this new publication that just came out.

There we present a complete theory about the threefold decomposition of
deformation (homothetic, affine and non affine components) as well as new
methods to perform it in the Thin Plate Spline space (Varano et al 2017).
Moreover, some new efforts are present:

We unify in a unique formalism the Procrustes metric and the bending energy
metric (that is a pseudo-distance vanishing on affine transformations). We
also introduce two new types of energies: the stretching energy that deals
with affine transformations and the gamma energy (depending on two
source-dependent constants) that unifies affine and non affine energetics
in a given transformation. We also introduce the decay factor rho that
relates the strain energy (calculated on the body only) and the bending
energy (calculated on the whole R^m). We unify in a unique formalism the
Ordinary Procrustes Analysis and the Modified Ordinary Procrustes Analysis
(Varano et al., 2017). One key aspect is to consider the concept of
orthogonality between components non-strictly depending from the Euclidean
metric.

Our new methods deal also with the m-Volume size definition, that has a
more physical meaning ,in place of Centroid Size. We demonstrate the
usefulness of all of this using both simulated examples (in both 2D and 3D)
and using a real clinical example. This is inserted in a long term project
aimed at bridging Geometric Morphometrics and Continuum Mechanics.



Varano V., *Piras P.,* Gabriele S., Teresi L., Nardinocchi L., Dryden I.L.,
Torromeo C., Puddu P.E. 2018. The Decomposition of Deformation: new metrics
to enhance shape analysis in medical imaging. *Medical Image Analysis*, 46:
35-56.Doi:https://doi.org/10.1016/j.media.2018.02.005



A complete set of R functions for all of this is available upon request.

All the best

Paolo

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[MORPHMET] New pub

2018-02-02 Thread Paolo Piras
Hi folks,

I signal this new article that is in "online first" in Palaeogeography,
Palaeoclimatology, Palaeoecology. We analyzed mandible's phenotypes and
extinction rates starting from a new composite phylogeny that is an update
of a previous effort (Piras et al 2013) and that includes 157 valid taxa
(later pruned to include only those taxa for which mandible' phenotypes
were available).

Piras P.,  Silvestro D., Carotenuto, F., Castiglione S., Kotsakis T.,
Maiorino L., Melchionna M., Mondanaro A., Sansalone G., Serio C., Vero
V.A., Raia P. Evolution of the sabertooth mandible: a deadly
ecomorphological specialization. In press.  Palaeogeography,
Palaeoclimatology, Palaeoecology.
https://doi.org/10.1016/j.palaeo.2018.01.034

Regards
Paolo

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[MORPHMET] New Pub

2018-01-24 Thread Paolo Piras
Hi folks,
I would like to alert you about this new pub

Maiorino, L., Farke, A.A., Kotsakis, T., Raia, P., Piras, P. 2018. Who is
the most stressed? Morphological disparity and mechanical behavior of the
feeding apparatus of ceratopsian dinosaurs (Ornithischia, Marginocephalia).
Cretaceous Research, 84, pp. 483-500

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[MORPHMET] New pub

2017-12-07 Thread Paolo Piras
Hi folks,
I write to inform you about this new pub

Profico A., *Piras P.*, Buzi C., Di Vincenzo F., Lattarini F., Melchionna
M.A., Veneziano A., Raia P., Manzi G. 2017. The evolution of cranial base
and face in Cercopithecoidea and Hominoidea: modularity and morphological
integration. *American Journal of Primatology*, 79(12). DOI:
10.1002/ajp.22721

All the best
Paolo

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[MORPHMET] new pub

2017-08-02 Thread Paolo Piras
Hi folks,
I would like to signal you this paper where we tried to apply new
covariation/disintegration strategies to the interaction between human left
atrium and left ventricle
All the best
Paolo

https://www.nature.com/articles/s41598-017-06189-w

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[MORPHMET] New pub

2017-02-17 Thread Paolo Piras
Hi folks
I would like to signal this new pub that is now on Evolutionary Ecology
Research.

Maiorino L., Farke A.A., Kotsakis T., Piras P*.* 2017. Macroevolutionary
patterns in cranial and lower jaw shape of ceratopsian dinosaurs
(Dinosauria, Ornithischia): phylogeny, morphological integration and
evolutionary rates. *Evolutionary Ecology Research*, 18: 123-167.

Best
Paolo

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[MORPHMET] New pub Geometric Morphometrics in cardiology

2016-01-19 Thread Paolo Piras
Hi folks,
for those that could be interested I signal this publication

*Piras P.*, Teresi L., Gabriele S., Evangelista A., Esposito G., Varano V.,
Torromeo C., Nardinocchi P. & Puddu P.E. (2016) - Systo–diastolic LV shape
analysis by geometric morphometrics and parallel transport highly
discriminates myocardial infarction. In: Camara O., et. al. (Eds), STACOM
2015, Lecture Notes in Computer Science, vol. 9534, Springer International,
pp. 119-129.

PDF available on request
Best
paolo

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[MORPHMET] new pub

2015-05-15 Thread ppiras
Hi folks,
I just want to signal you this new pub
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0126464

best
paolo


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