[Mzmine-devel] MS/MS fragments list

2012-12-03 Thread Raghavendra Gunnaiah
Dear Developers and Users, Greetings! Is it possible to export MS/MS fragment peaks for multiple MS1 peaks at a time? At present we can export MS/MS fragments of one peak at a time. regards Raghavendra Gunnaiah Ph.D. scholar Department of Plant Science McGill Univerisity, Canada --

Re: [Mzmine-devel] Chloride and Bromide isotopic peaks

2012-12-03 Thread Tomas Pluskal
Hi Alex, First, you need to setup a development environment. Follow the "Hot to start MZmine 2 development" tutorial: https://docs.google.com/document/pub?id=1P2Jy3IROmBT2dIggy9u5IK0rCFpT2HHOk1l_XTIrnps Then you can try to make a copy of an existing module, and start changing the functionality

Re: [Mzmine-devel] problems with mac OSX after apple update

2012-12-03 Thread Tomas Pluskal
Hi, I think it doesn't matter if you use java version 1.6 or 1.7 - you won't see any difference with MZmine. If you do want to use 1.7, there are two ways. One is to edit the startMZmine script and change the JAVA_COMMAND variable, the other is to change the preferred JDK in the Mac OS Java pr

Re: [Mzmine-devel] MS/MS fragments list

2012-12-03 Thread Tomas Pluskal
Hi Raghavendra, I think you can anticipate the answer... it is not possible, until someone implements such feature :) Cheers, Tomas On Dec 4, 2012, at 4:36 AM, Raghavendra Gunnaiah mailto:raghavendra.gunna...@mail.mcgill.ca>> wrote: Dear Developers and Users, Greetings! Is it possible to e