An agent-based simulation platform studying the immunological synapse dynamics
Anastasios Siokis, PhD, Postdoc in Translational Disease Modeling, Sanofi, 
Germany
June 9, 2021
12:00-1:00 PM EDT

Registration (Free): https://www.rosaandco.com/webinars
Abstract: During immunological synapse (IS) formation, T cell receptor (TCR) 
signaling complexes, integrins, as well as costimulatory and inhibitory 
molecules exhibit characteristic spatial localization. The IS is built around a 
TCR-peptide-major histocompatibility complex (pMHC) core, and is surrounded by 
an integrin ring (Monks, et al., 1998). Small immunoglobulin superfamily 
(sIGSF) adhesion complexes form a corolla of microdomains outside the integrin 
ring, which is shown to recruit and retain the major costimulatory and 
checkpoint complexes that regulate the responses to TCR engagement (Demetriou, 
et al., 2020). The positioning of these molecules drives T cell signaling and 
fate decision, making forces that govern IS formation of particular interest.
To gain insights into the mechanisms underlying molecular reorganization and 
characteristic pattern formation during IS formation, we developed a general 
agent-based simulation platform able to test different hypotheses. The 
simulations identify several key biological interactions.
This work establishes a general simulation framework that can recapitulate 
complex pattern formation processes observed in cell-bilayer and cell-cell 
interfaces. The presented results have implications for the understanding of T 
cell activation and fate decision

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